Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebotomus_20papatasi_20[genbank_20GCA_5F000262795.1_202012-05-16] 106,826 sequences; 363,767,980 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq99594 132 3e-26 seq43915 132 3e-26 seq6479 129 4e-25 seq27989 116 2e-21 seq49273 114 9e-21 seq13706 114 9e-21 seq18 113 3e-20 seq103633 111 1e-19 seq60148 102 5e-17 seq83690 86.0 4e-12 seq20784 86.0 4e-12 seq186 86.0 4e-12 seq60870 82.4 5e-11 seq7722 82.4 5e-11 >seq99594 Length=475 Score = 132 bits (146), Expect = 3e-26 Identities = 87/96 (91%), Gaps = 5/96 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 213 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTTGGAATCTCGT 154 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGAT 25992 |||||| |||||||||||||||||||||||||| || Sbjct 153 TAATCCATTCATGCGCGTCACTAATTAGATGACAAT 118 >seq43915 Length=1340 Score = 132 bits (146), Expect = 3e-26 Identities = 87/96 (91%), Gaps = 5/96 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGG-----GTAATCTCGT 25956 |||||||||||||||||| ||||||||||||||||||||||||| | |||||||| Sbjct 175 AAGCCCGTTCCCTTGGCTATGGTTTCGCTAGATAGTAGATAGGGACAGTAGGAATCTCGT 116 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGAT 25992 |||||| ||||||||||||||||||||||||||||| Sbjct 115 TAATCCATTCATGCGCGTCACTAATTAGATGACGAT 80 Score = 111 bits (122), Expect = 1e-19 Identities = 82/96 (85%), Gaps = 5/96 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||| |||||||||||||| ||||||||||| || | |||||| | Sbjct 519 AAGCCCGTTCCCTTTGCTGTGGTTTCGCTTGATAGTAGATATGGACAGTAGGAATCTCTT 460 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGAT 25992 |||||| ||||| |||||||||||||| |||||||| Sbjct 459 TAATCCATTCATCCGCGTCACTAATTATATGACGAT 424 >seq6479 Length=3691 Score = 129 bits (142), Expect = 4e-25 Identities = 86/96 (90%), Gaps = 5/96 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 3316 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGAATCTCGT 3375 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGAT 25992 |||||| |||||||||||||||| ||| |||||||| Sbjct 3376 TAATCCATTCATGCGCGTCACTATTTATATGACGAT 3411 Score = 111 bits (122), Expect = 1e-19 Identities = 82/96 (85%), Gaps = 5/96 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||| |||||||||||||||||| ||||||| || | |||||| | Sbjct 2781 AAGCCCGTTCCCTTTGCTGTGGTTTCGCTAGATGGTAGATATGGACAGTAGGAATCTCTT 2840 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGAT 25992 |||||| ||||| || |||||||||||||||||||| Sbjct 2841 TAATCCATTCATCCGTGTCACTAATTAGATGACGAT 2876 Score = 102 bits (112), Expect = 5e-17 Identities = 74/86 (86%), Gaps = 5/86 (6%) Strand=Plus/Plus Query 25912 CCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGG-----GTAATCTCGTTAATCCTTTC 25966 |||| ||||||| || ||||||| ||||||||||| | ||||||||| |||| ||| Sbjct 2428 CCTTAGCTGTGGCTTTGCTAGATGGTAGATAGGGGCAGTAGGAATCTCGTTGATCCATTC 2487 Query 25967 ATGCGCGTCACTAATTAGATGACGAT 25992 |||||||||||||||||||||||||| Sbjct 2488 ATGCGCGTCACTAATTAGATGACGAT 2513 >seq27989 Length=4809 Score = 116 bits (128), Expect = 2e-21 Identities = 72/77 (94%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 851 CTCTCTATTCAGAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCTCTATCGGTCTCGT 910 Query 20007 GGTAATATTTAGCCTTA 20023 ||| ||||||||||||| Sbjct 911 GGTTATATTTAGCCTTA 927 >seq49273 Length=1113 Score = 114 bits (126), Expect = 9e-21 Identities = 80/90 (89%), Gaps = 6/90 (7%) Strand=Plus/Minus Query 25908 GTTCCCTTGGCTGTGGTTT-CGCTAGATAGTAGATAGGGG-----GTAATCTCGTTAATC 25961 ||||||||||||||||||| ||||| ||||||||||||| | ||||||||||||| Sbjct 1113 GTTCCCTTGGCTGTGGTTTTCGCTATATAGTAGATAGGGACAGTAGGAATCTCGTTAATC 1054 Query 25962 CTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||||||||||||||||||||||||||| Sbjct 1053 CATTCATGCGCGTCACTAATTAGATGACGA 1024 >seq13706 Length=547 Score = 114 bits (126), Expect = 9e-21 Identities = 84/96 (88%), Gaps = 5/96 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG--GGTA---ATCTCGT 25956 ||||| ||||||||||||||||||||||||||||||||||| || ||| ||||||| Sbjct 183 AAGCCTGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAAGGACAGTAGGGATCTCGT 242 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGAT 25992 |||||| |||||| ||||||||||| |||| ||||| Sbjct 243 TAATCCATTCATGTGCGTCACTAATAAGATAACGAT 278 >seq18 Length=974545 Score = 113 bits (124), Expect = 3e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | ||||||||| | ||| || ||||||||||| || ||||||||||| ||| Sbjct 449673 CCACCACGGAGACGCAACACGAGATGCAGGGTGCTCTCCTTCTGGATATTGTAATCCGAC 449614 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | ||| | || || | || ||||||||||| || | || || ||||| | || Sbjct 449613 AGTGTACGGCCATCCTCAAGCTGCTTTCCGGCAAAGATCAAACGCTGCTGATCCGGAGGA 449554 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | || || |||||| ||| ||| |||||||| | | |||||| ||| || Sbjct 449553 ATTCCCTCCTTGTCCTGAATCTTTGCTTTCACATTTTCAATGGTATCTGAGGGTTCCACC 449494 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || || || || ||||| ||||| | || ||||| || |||||||| || Sbjct 449493 TCCAAGGTGATGGTTTTCCCCGTAAGAGTCTTCACAAAGATCTGCATTTT 449444 >seq103633 Length=226 Score = 111 bits (122), Expect = 1e-19 Identities = 82/96 (85%), Gaps = 5/96 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||| || ||||| |||||||||||||| | ||| || | Sbjct 180 AAGCCCGTTCCCTTGGCTGTAGTATCGCTCGATAGTAGATAGGGATAGTAGGAATGTCAT 121 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGAT 25992 |||||| ||||||||||||| ||||||||||||||| Sbjct 120 TAATCCATTCATGCGCGTCATTAATTAGATGACGAT 85 >seq60148 Length=1818 Score = 102 bits (112), Expect = 5e-17 Identities = 74/86 (86%), Gaps = 5/86 (6%) Strand=Plus/Minus Query 25912 CCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGG-----GTAATCTCGTTAATCCTTTC 25966 |||| ||||||| || ||||||| ||||||||||| | ||||||||| |||| ||| Sbjct 1401 CCTTAGCTGTGGCTTTGCTAGATGGTAGATAGGGGCAGTAGGAATCTCGTTGATCCATTC 1342 Query 25967 ATGCGCGTCACTAATTAGATGACGAT 25992 |||||||||||||||||||||||||| Sbjct 1341 ATGCGCGTCACTAATTAGATGACGAT 1316 >seq83690 Length=433 Score = 86.0 bits (94), Expect = 4e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | || | ||| |||||| ||||||||||| ||||| || | Sbjct 254 TACCACCACGGAGACGGAGGACAAGATGGAGAGTGGATTCCTTTTGAATGTTGTAGTCCG 195 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | ||| | || || ||||| ||||| || || || || || || || || | | Sbjct 194 AAAGAGTACGGCCATCTTCCAATTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCTGGAG 135 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||| |||||| || || ||| || |||| | |||||| | ||| | Sbjct 134 GGATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATAGTATCGGAAGGTTCGA 75 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 | || | || || || || || || | ||| || || || ||||||||| Sbjct 74 CCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATG 25 >seq20784 Length=300 Score = 86.0 bits (94), Expect = 4e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 19949 CTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGG 20008 ||||||||||||||||| ||||||||| |||| ||||||||| ||||||| ||||| Sbjct 300 CTCTCTTCAAAGTTCTTCGCAACTTTCCTTCACAGTACTTGTTTGCTATCGAATTCGCGT 241 Query 20009 TAATATTTAGCCTTA 20023 ||||||||||||| Sbjct 240 CTATATTTAGCCTTA 226 >seq186 Length=148488 Score = 86.0 bits (94), Expect = 4e-12 Identities = 159/232 (69%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| ||||| | | |||||| || | ||| || || |||||| ||||| ||||| | Sbjct 13174 CATT-CCACCACGGAGACGCAAGACAAGATGGAGGGTAGACTCCTTCTGAATGTTGTAGT 13116 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 |||| | ||| | || || | ||| || || ||||| || || || || || || | Sbjct 13115 CAGAAAGGGTACGACCATCTTCAAGTTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCTG 13056 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 ||| | ||| || || ||| ||| || ||||||||||| | ||||| | Sbjct 13055 GGGGAATGCCCTCCTTATCCTGAATCTTAGCCTTCACATTCTCAATCGTATCAGAGGGCT 12996 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || | || || || ||||| ||||| || ||||| || |||||||| Sbjct 12995 CGACCTCAAGAGTGATGGTCTTACCGGTCAAAGTCTTCACAAAGATCTGCAT 12944 >seq60870 Length=785 Score = 82.4 bits (90), Expect = 5e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 38126 CTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAA 38185 ||| || ||||||||||||||||| | |||| | || |||||||| ||||| ||||| Sbjct 713 CTCTTTCTGAATATTGTAATCAGAAAGGGTACGTCCATCTTCTAATTGCTTTCCAGCAAA 654 Query 38186 TATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTT 38233 |||| ||||| ||||| | |||| ||| ||||| ||| ||| || Sbjct 653 AATTAAACGTTGCTGATCTGGTGGGATGCCCTCTTTATCCTGAATCTT 606 >seq7722 Length=1803 Score = 82.4 bits (90), Expect = 5e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 38126 CTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAA 38185 ||| || ||||||||||||||||| | |||| | || |||||||| ||||| ||||| Sbjct 108 CTCTTTCTGAATATTGTAATCAGAAAGGGTACGTCCATCTTCTAATTGCTTTCCAGCAAA 49 Query 38186 TATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTT 38233 |||| ||||| ||||| | |||| ||| ||||| ||| ||| || Sbjct 48 AATTAAACGTTGCTGATCTGGTGGGATGCCCTCTTTATCCTGAATCTT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334511118214406