Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebotomus_20papatasi_20[genbank_20GCA_5F000262795.1_202012-05-16] 106,826 sequences; 363,767,980 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq7333 111 1e-19 >seq7333 Length=2231 Score = 111 bits (122), Expect = 1e-19 Identities = 173/246 (70%), Gaps = 1/246 (0%) Strand=Plus/Minus Query 20192 TAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGA 20251 |||| || |||||||||| ||||| | ||| ||||| || | ||| |||| | || Sbjct 1544 TAGACATGAGCATCTCCCAGAGTGTGGACAAAATCCCCAGGCTTGAGATCAGTTATGTGG 1485 Query 20252 GCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATG 20311 || | || ||| | |||| |||||||||||||| || ||||| ||||| ||||| Sbjct 1484 GCGATGATTCGAGTGAGAAGGGCGTAGCTGGCAATGTTGAATGGAACACCCAAGCCCATA 1425 Query 20312 TCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACAT 20371 ||| |||| | ||||||| ||| ||||| || || || | || || ||||| || Sbjct 1424 TCTGCCGATCGTTGATACATCTGGCAGGAGAGTTCCCCATTGGCCACGTAAAACTGCACG 1365 Query 20372 AACAAGTGACAGGG-CGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACAT 20430 | |||||||||| || || ||||| | | || ||| | || ||||| || | ||| Sbjct 1364 AGGCAGTGACAGGGTGGGTAGTGCCATTATGGGTAAATCCACAGGATTCCATGCGCTCAT 1305 Query 20431 AATGAT 20436 || || Sbjct 1304 GATAAT 1299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440783423865840