Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebotomus_20papatasi_20[genbank_20GCA_5F000262795.1_202012-05-16] 106,826 sequences; 363,767,980 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq18 98.7 8e-16 >seq18 Length=974545 Score = 98.7 bits (108), Expect = 8e-16 Identities = 162/233 (70%), Gaps = 18/233 (8%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || |||| ||| ||||| || |||||||||||||| || |||||||| | || | || Sbjct 449664 AGACGCAACACGAGATGCAGGGTGCTCTCCTTCTGGATATTGTAATCCGACAGTGTACGG 449605 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 | || || | ||||| |||||||| |||| |||||||||||| || | | ||| Sbjct 449604 CCATCCTCAAGCTGCTTTCCGGCAAAGATCAAACGCTGCTGATCCGGAGGAATTCCCTCC 449545 Query 34030 TTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCA---GTAGATTCGCATTCGACC 34086 |||||| | | | ||||||| ||||| | ||| ||| | | ||| ||| Sbjct 449544 TTGTCC-TGAATCTTTGCTT--------TCACATTTTCAATGGTATCTGAGGGTTCCACC 449494 Query 34087 ------GTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATTTTTAA 34133 || || ||||| || || || || ||||||||||| |||||||| || Sbjct 449493 TCCAAGGTGATGGTTTTCCCCGTAAGAGTCTTCACAAAGATCTGCATTTTGAA 449441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396545447834452