Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebotomus_20papatasi_20[genbank_20GCA_5F000262795.1_202012-05-16] 106,826 sequences; 363,767,980 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq35959 116 8e-21 >seq35959 Length=4883 Score = 116 bits (128), Expect = 8e-21 Identities = 319/479 (67%), Gaps = 10/479 (2%) Strand=Plus/Plus Query 297244 GATGTCTTTTGGATTGTAACTAGGGATATTAGTCGACCAACCGGTACCGATTCCACTCGA 297303 ||| || |||||||||| | || || || || ||||| || || || || || |||| Sbjct 1465 GATCTCCCTTGGATTGTAGTTTGGAATCTTTGTGGACCAGCCTGTTCCTATGCC-CTCGG 1523 Query 297304 -ACCATTCACCAGAATGCTCGGAATAACAGGCACATAATACTCTGGTTCGATCTTGTCAC 297362 |||||| || || | | ||||| | || | || | ||||||| || | | | Sbjct 1524 CACCATTTACAAGTACCATGGGAATGATGGGTAGGTACCAGACTGGTTCAATGTCCTGAT 1583 Query 297363 CGTCATCATACAGATATTTCAGAAGATTATCGTCCGTATCGACG-AAAACCTGTCGAGTC 297421 ||| || | | || | || ||| |||||| || || | |||| | |||||| | Sbjct 1584 TGTCGTCCTTTTGGTACTGAAGGAGAGGATCGTC-GTGCGGATGGAAAATCAGTCGAGCC 1642 Query 297422 TGAGGGTTCAGTTTTGTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAAT 297481 | || || | ||||| || || || | | || |||||| ||||| | | | Sbjct 1643 AGGGGCGAGAGCATCGTGAAGATGTAACGGGGAGATGCACTATCCTTGCCACCATTGAGT 1702 Query 297482 CTCGAACCGAACTGGCCCTCCGGCAACAACCAG-TTGATGTTATTGCTTCCGACATAATC 297540 |||| ||||| || || | ||| || || ||||| |||||||| || ||||||| Sbjct 1703 CTCGTGCCGAATTGACCATTTGGCTG-AAGGAGATTGATATTATTGCTGCCAACATAATT 1761 Query 297541 CTGTGCAAGGTTCACGATGGTCCCTTGCAGAGATGCT--TCGCCATGGTGATAGGCGCTA 297598 ||| || || || || |||||| |||||| || || |||||||||||||| Sbjct 1762 CTGAGCCAGATTGACAATGGTCGAA--CAGAGACTCTGCTCACCATGGTGATAGGCTGAC 1819 Query 297599 TGCTCTGCAACGTAACCGCTGAACTGTGCAACCTTCACGTCGGTCGTCAAATTGCGCTTG 297658 | ||| || || |||| || ||||||||||| || || || | |||||||||| Sbjct 1820 TTCTCAGCCACTGAACCAGCCAATTGTGCAACCTTAACCTCTTTCTTGTCATTGCGCTTG 1879 Query 297659 AAAGCTGAATATATCACTTTCCGTTGAGAAGGTTTGAAACCATCAACGACCGACGGAAT 297717 ||| || | | |||||||| || || || || || ||||| || || ||||||| Sbjct 1880 AAACATGTAAAAATCACTTTACGCTGTCCCGGCTTCAAGCCATCCACCACACACGGAAT 1938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1101370479183100