Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebotomus_20papatasi_20[genbank_20GCA_5F000262795.1_202012-05-16] 106,826 sequences; 363,767,980 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq4578 145 9e-30 >seq4578 Length=10518 Score = 145 bits (160), Expect = 9e-30 Identities = 353/531 (66%), Gaps = 19/531 (4%) Strand=Plus/Plus Query 114103 CCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGG 114162 |||||| || |||| |||||||| | | |||| |||| | | |||||||| || Sbjct 3752 CCACATCTCGTACTGAAGGATACCCTTGCTCACTGGACATCCTGCGTACGTCTCGTAGGG 3811 Query 114163 GCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAA 114222 || ||| ||||||||| | || ||||| | ||| | | || || ||||| || Sbjct 3812 TCCAAGCTTCTCAGCCAATTCGCAACTGGCCTCCAAGGCACCATAGTAGATGGTCTCGAA 3871 Query 114223 AATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAA 114282 || | ||| | | ||||||||| ||| |||| | | || || |||||| || Sbjct 3872 GATTTGCTGATTGAGTTTCTTGGCCTCTTCGCTATCATAGGGCAGACGCATCAAAATGAA 3931 Query 114283 TACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGAC--TTT 114340 ||||||| ||||| || || || | |||||||| | ||||||||||| ||| ||| Sbjct 3932 AGCATCCGCTAGACCCTGAACCCCAATCCCAATTGGCCTGTGTCTCATATTGGACAATTT 3991 Query 114341 CGAGCGGTCTC---CACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTG 114397 || ||| ||||||||| | || | ||||| || | || | ||| || Sbjct 3992 -----GGCCTCTGGCACGGGATAGTAGTTGATGTCGATGACTTTGTTCAAATTGCGCGTA 4046 Query 114398 ACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCA---TTG 114454 |||| ||| || | | | | || |||| ||||| | |||| ||| || Sbjct 4047 ACAATCTTCGTTACTGCTTTGAG--TTTC----TCAAAGTCGTACGTCTTATCAGCCTTT 4100 Query 114455 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 114514 || || || || || || || |||||||| ||||||| |||||||||| | Sbjct 4101 ACGAACATATTGAGAGCAATAGATGCCAGATTGCACACAGCAATCTCATCCTTGGACGAA 4160 Query 114515 TACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 114574 || |||| |||||| || |||||||| || ||| || || | |||| ||||| Sbjct 4161 TATTCTACAATTTCTGTGCACAAATTGCTACAGCGAATTGTCCCAATATTCTGCTGATTA 4220 Query 114575 GACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCC 114625 ||| |||| |||||||| ||||| | |||||| |||||||| || ||| Sbjct 4221 CTCTTCCTGTTGCACGCATCTTTGTACAACATGTACGGCGTCCCAGTTTCC 4271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596555938804080