Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebotomus_20papatasi_20[genbank_20GCA_5F000262795.1_202012-05-16] 106,826 sequences; 363,767,980 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq4578 96.9 3e-15 >seq4578 Length=10518 Score = 96.9 bits (106), Expect = 3e-15 Identities = 221/333 (66%), Gaps = 0/333 (0%) Strand=Plus/Minus Query 93976 TCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGCGGGGGGAATC 94035 || ||||| | ||| | ||| ||| | ||||| |||||||| || || ||||| Sbjct 8107 TCAGGAATCTACGATACCCTGAAGCAATGTGCTCTGATCTCAAAGGCTGCCGGAGGAATT 8048 Query 94036 GGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACCAATGGCACC 94095 || | | | | ||| | | ||||| |||| | || ||| |||||||||||| Sbjct 8047 GGCGTGAATATGCACTGCATTCGTGCTCGGGGCAGTCATATTGCCGGCACCAATGGCACC 7988 Query 94096 TCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTACGTGGACCAG 94155 ||||| ||||| ||||| ||||| || |||| ||||| | || ||||||| || ||| Sbjct 7987 TCCAATGGCCTTGTCCCAATGCTTCGTGTCTACAACACAACAGCCTGCTACGTTGATCAG 7928 Query 94156 GGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTG 94215 ||||| | | | ||| | || || |||| || ||||||||||||| ||| | Sbjct 7927 GGTGGGAACAAGCGTCCCGGTGCCTTTGCTATCTACCTGGAGCCCTGGCACGGTGACATC 7868 Query 94216 CAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGCCAGAGACCTC 94275 | || | || || ||||| ||||| || || | || || || || Sbjct 7867 TTTGAGTTTTTGGATCTCAAGAAGAATACGGGCAAGGAGAAGGCACGAGCAAGGGATCTG 7808 Query 94276 TTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308 ||||| ||||| ||| | || || || |||||| Sbjct 7807 TTCTATGCTCTGTGGATCCCGGATCTGTTTATG 7775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494062583742960