Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebotomus_20papatasi_20[genbank_20GCA_5F000262795.1_202012-05-16] 106,826 sequences; 363,767,980 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq4578 138 1e-27 >seq4578 Length=10518 Score = 138 bits (152), Expect = 1e-27 Identities = 261/380 (69%), Gaps = 7/380 (2%) Strand=Plus/Plus Query 110065 TCTTCACAGTCGAAGGGAAGAC-CACAAAGAATAAACACATCCGCTAGACCCTGAACACC 110123 ||||| | ||| |||| |||| || || ||| || ||||||| ||||||||||| || Sbjct 7224 TCTTCGCTGTCATAGGGCAGACGCATCAA-AATGAAAGCATCCGCCAGACCCTGAACCCC 7282 Query 110124 GAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTT 110183 | ||||| || | ||| |||| || || | || | |||||| || |||| Sbjct 7283 AATCCCAATTGGCCTGTGCCTCATATTGGACAATTTGGCCTCTGGTACGGGATAGTAGTT 7342 Query 110184 GCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTC 110243 | ||||||||| || | ||| ||| ||| ||||||| | | | | |||||| || Sbjct 7343 GATGTCGATGACTTTGTTCAAATTGCGCGTAACAATCTTCGTCACTGCTTTGAGTTTCTC 7402 Query 110244 GTAATCGAACGTTTTCGTCTCCTTATTGA-CATATTTGGGGAGAGCAATAGACGCAAGAT 110302 ||||| |||| || |||| || |||||| |||||||||||| || |||| Sbjct 7403 AAAATCGTACGTCTTATCAGCCTTTACGAACATATT----GAGAGCAATAGATGCCAGAT 7458 Query 110303 TGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAAC 110362 ||||||||| | |||| || ||| | ||||| | |||||| || ||||| ||| || Sbjct 7459 TGCACACAGCAATCTCATCCTTGGACGAATATTCTACAATTTCTGTGCACAAATTGCTAC 7518 Query 110363 TCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCA 110422 ||| || | |||| |||||| || |||||| ||||| || || | || Sbjct 7519 AGCGAATTGTCCCAATATTCTGCTGATTGCTCTTCCTGTTGCACGCATCTTTGTACAACA 7578 Query 110423 TGTATGGGGTACCAGTTTCC 110442 |||| || || ||||||||| Sbjct 7579 TGTACGGCGTCCCAGTTTCC 7598 Score = 125 bits (138), Expect = 8e-24 Identities = 259/381 (68%), Gaps = 7/381 (2%) Strand=Plus/Plus Query 110064 CTCTTCACAGTCGAAGGGAAGAC-CACAAAGAATAAACACATCCGCTAGACCCTGAACAC 110122 |||||| | || |||| |||| || || ||| || ||||||||||||||||||| | Sbjct 3896 CTCTTCGCTATCATAGGGCAGACGCATCAA-AATGAAAGCATCCGCTAGACCCTGAACCC 3954 Query 110123 CGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGT 110182 | | ||||| || | || |||| || || | || | ||||| || ||| Sbjct 3955 CAATCCCAATTGGCCTGTGTCTCATATTGGACAATTTGGCCTCTGGCACGGGATAGTAGT 4014 Query 110183 TGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGT 110242 || ||||||||| || | ||| ||| ||| ||||||| | | | | |||||| | Sbjct 4015 TGATGTCGATGACTTTGTTCAAATTGCGCGTAACAATCTTCGTTACTGCTTTGAGTTTCT 4074 Query 110243 CGTAATCGAACGTTTTCGTCTCCTTATTGA-CATATTTGGGGAGAGCAATAGACGCAAGA 110301 | | ||| |||| || |||| || |||||| |||||||||||| || ||| Sbjct 4075 CAAAGTCGTACGTCTTATCAGCCTTTACGAACATATT----GAGAGCAATAGATGCCAGA 4130 Query 110302 TTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAA 110361 |||||||||| | |||| || ||| | ||||| | |||||| || ||||| ||| | Sbjct 4131 TTGCACACAGCAATCTCATCCTTGGACGAATATTCTACAATTTCTGTGCACAAATTGCTA 4190 Query 110362 CTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGC 110421 | ||| || | |||| |||||| || |||||| ||||| || || | | Sbjct 4191 CAGCGAATTGTCCCAATATTCTGCTGATTACTCTTCCTGTTGCACGCATCTTTGTACAAC 4250 Query 110422 ATGTATGGGGTACCAGTTTCC 110442 ||||| || || ||||||||| Sbjct 4251 ATGTACGGCGTCCCAGTTTCC 4271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588189525622800