Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebotomus_20papatasi_20[genbank_20GCA_5F000262795.1_202012-05-16] 106,826 sequences; 363,767,980 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq75 91.5 2e-13 >seq75 Length=424856 Score = 91.5 bits (100), Expect = 2e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 154968 GATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGAT 155027 ||||| || ||| | |||||||| ||||||||| ||| | || || || ||| Sbjct 70659 GATGGGGCCAATATGAATGCACAAGTAGGACTATGTCGGCCAGGAGATTACGGAAGTGAT 70600 Query 155028 GTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGC 155087 |||| |||| | || ||||||||||| ||||||||||| ||||| || || || || ||| Sbjct 70599 GTATCTCATTTGAATTTACATAAAACTTTCTGTATTCCTCATGGTGGAGGTGGCCCAGGC 70540 Query 155088 GTAGGTCCTATAGGTGTA 155105 | || || || |||||| Sbjct 70539 ATGGGACCAATTGGTGTA 70522 Score = 82.4 bits (90), Expect = 9e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 155367 GATATAGCAAAGAGACTTATGGACTATGGATTCCATGCACCTACACTATCGTGGCCTGTG 155426 ||||| || ||| | |||||||||||||| || ||||| || ||| | || ||||| ||| Sbjct 69996 GATATTGCTAAGCGTCTTATGGACTATGGTTTTCATGCGCCAACAATGTCTTGGCCAGTG 69937 Query 155427 TTAGGAACTATGATGGTAGAACCCACAGAGTCTGA 155461 ||||||| ||||| | || || |||||||| || Sbjct 69936 GCAGGAACTTTGATGATTGAGCCAACAGAGTCAGA 69902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578439362667840