Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebotomus_20papatasi_20[genbank_20GCA_5F000262795.1_202012-05-16] 106,826 sequences; 363,767,980 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq75 87.8 2e-12 >seq75 Length=424856 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 159643 GATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGAT 159702 ||||| || ||| | |||||||| ||||| ||| ||| | || || || ||| Sbjct 70659 GATGGGGCCAATATGAATGCACAAGTAGGACTATGTCGGCCAGGAGATTACGGAAGTGAT 70600 Query 159703 GTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGC 159762 |||| |||| | || |||||||| || ||||||||||| ||||| || || || || ||| Sbjct 70599 GTATCTCATTTGAATTTACATAAAACTTTCTGTATTCCTCATGGTGGAGGTGGCCCAGGC 70540 Query 159763 GTAGGTCCTATTGGTGTA 159780 | || || ||||||||| Sbjct 70539 ATGGGACCAATTGGTGTA 70522 Score = 86.0 bits (94), Expect = 7e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 160042 GATATAGCAAAGAGACTTATGGACTATGGATTCCATGCACCTACACTATCGTGGCCTGTG 160101 ||||| || ||| | |||||||||||||| || ||||| || ||| | || ||||| ||| Sbjct 69996 GATATTGCTAAGCGTCTTATGGACTATGGTTTTCATGCGCCAACAATGTCTTGGCCAGTG 69937 Query 160102 TTAGGAACTATGATGGTAGAACCAACAGAGTCTGA 160136 ||||||| ||||| | || ||||||||||| || Sbjct 69936 GCAGGAACTTTGATGATTGAGCCAACAGAGTCAGA 69902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587265960531360