Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebotomus_20papatasi_20[genbank_20GCA_5F000262795.1_202012-05-16] 106,826 sequences; 363,767,980 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq186 131 1e-25 seq18 120 2e-22 seq83690 109 4e-19 seq60870 95.1 1e-14 seq7722 87.8 1e-12 >seq186 Length=148488 Score = 131 bits (144), Expect = 1e-25 Identities = 152/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||||||||| ||||| || || || ||||| || | | || | | |||| || | ||| Sbjct 14057 ATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCATCCTCAAGTTG 13998 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 || || ||||| |||||||| || || || || ||||| ||||||||||| ||||| || Sbjct 13997 TTTCCCAGCAAAAATCAAACGTTGCTGGTCTGGAGGAATTCCTTCTTTATCCTGAATCTT 13938 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 ||| ||| |||| | || ||||| | ||| ||||| ||||| | || || ||||| Sbjct 13937 GGCTTTGACATTTTCAATTGTATCAGATGGTTCAACTTCCAGAGTAATTGTCTTTCCGGT 13878 Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470 | |||||| || || || |||||| Sbjct 13877 CAGAGTTTTAACGAAAATTTGCATG 13853 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| | |||||| || | |||||||| || || || || || ||||| || | | Sbjct 13852 CCACCTCTGAGACGTAACACAAGGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAG 13793 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | | |||| ||||| || || || ||||| ||||||||||| ||||| || || Sbjct 13792 AGAGTACGGCCATCTTCCAACTGTTTCCCGGCAAAGATCAAACGCTGCTGATCTGGTGGG 13733 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || || || || || || || | || | ||||||||| | || ||| Sbjct 13732 ATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATAGTGTCAGAGGGCTCAACT 13673 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || ||||| | || || || || | || || ||||| |||||||| Sbjct 13672 TCGAGAGTAATGGTCTTTCCAGTGAGGGTCTTGACAAAGATCTGCAT 13626 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| | | |||||| || |||||||||||||| || || || || ||||| |||| Sbjct 13398 CCTCCACGGAGACGTAAGACCAAATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAC 13339 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| || | ||||| || || || || | ||| || || || || || Sbjct 13338 AAGGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAAATGAGACGTTGCTGGTCTGGGGGG 13279 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || || || |||||||| || || || ||| | || | |||||||| | ||| ||| Sbjct 13278 ATACCCTCCTTATCTTGGATCTTAGCCTTGACATTCTCAATGGTGTCAGATGGTTCAACT 13219 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| |||| || || ||||| | ||||| ||||| || ||||| Sbjct 13218 TCAAGGGTGATGGTCTTTCCGGTAAGGGTTTTGACAAAAATTTGCAT 13172 Score = 111 bits (122), Expect = 1e-19 Identities = 148/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| |||||||| || || || |||||||| || | | || | |||| || | ||| Sbjct 13601 ATGGAGGGTAGACTCCTTCTGGATATTGTAGTCAGACAGGGTACGACCATCTTCAAGTTG 13542 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || ||||| |||||||||||||| || || || || || || ||||| |||| || Sbjct 13541 CTTTCCGGCAAAGATCAAACGCTGTTGGTCCGGTGGGATCCCCTCCTTATCCTGAA--TT 13484 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 | | || |||| | ||| ||||| | ||| || ||||| || | || || ||||| Sbjct 13483 TGGCCTTCACGTTTCAATAGTATCAGAAGGTTCGACCTCAAGGGTAATGGTCTTTCCGGT 13424 Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470 | || || ||||| ||||||||| Sbjct 13423 AAGGGTCTTGACAAAGATCTGCATG 13399 >seq18 Length=974545 Score = 120 bits (132), Expect = 2e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| || || | ||| ||||| || || || ||||||||||| | | || | | | Sbjct 449662 ACGCAACACGAGATGCAGGGTGCTCTCCTTCTGGATATTGTAATCCGACAGTGTACGGCC 449603 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || | ||||| || ||||| ||||||||||| ||||| || ||||| || || || Sbjct 449602 ATCCTCAAGCTGCTTTCCGGCAAAGATCAAACGCTGCTGATCCGGAGGAATTCCCTCCTT 449543 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 || ||||| ||| ||| ||| |||| | || || || | |||||| || | |||| Sbjct 449542 GTCCTGAATCTTTGCTTTCACATTTTCAATGGTATCTGAGGGTTCCACCTCCAAGGTGAT 449483 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| || || | ||| || ||||| |||||||| Sbjct 449482 GGTTTTCCCCGTAAGAGTCTTCACAAAGATCTGCAT 449447 >seq83690 Length=433 Score = 109 bits (120), Expect = 4e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| || || ||||| ||||| || ||||| || | | ||| | | |||| |||||||| Sbjct 229 ATGGAGAGTGGATTCCTTTTGAATGTTGTAGTCCGAAAGAGTACGGCCATCTTCCAATTG 170 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || || || |||| |||||| || || || || || ||||| || || || || || Sbjct 169 CTTTCCAGCGAAGATCAGACGCTGCTGGTCTGGAGGGATTCCTTCCTTGTCCTGGATCTT 110 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || || | || | ||| || || | ||| || ||||| |||| || ||||| || Sbjct 109 GGCCTTGACGTTCTCAATAGTATCGGAAGGTTCGACCTCAAGGGTGATGGTCTTGCCAGT 50 Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470 | || || ||||| ||||||||| Sbjct 49 GAGGGTCTTGACAAAGATCTGCATG 25 Score = 102 bits (112), Expect = 6e-17 Identities = 132/181 (73%), Gaps = 1/181 (1%) Strand=Plus/Minus Query 101289 TATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCT 101348 |||||||||| | | ||| | |||| || | |||||| || ||||| |||||||||| Sbjct 433 TATTGTAATCCGAAAGAGTACGACCATCTTCAAGTTGCTTTCCGGCAAAGATCAAACGCT 374 Query 101349 GTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGT 101408 | || || || || || ||||| || || |||||||| || ||| | || | |||| Sbjct 373 GCTGGTCTGGAGGGATTCCTTCCTTGTCCTGAATTTTAGCCTTGACATTCTCAATGGTGT 314 Query 101409 CAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCA 101468 |||| | || ||||| ||||| | || || ||||| | || || ||||| ||||||| Sbjct 313 CAGAGGGCTCAACTTCGAGAGTAATGGTCTT-CCGGTAAGGGTCTTGACAAAGATCTGCA 255 Query 101469 T 101469 | Sbjct 254 T 254 >seq60870 Length=785 Score = 95.1 bits (104), Expect = 1e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| | ||| || || || ||||| || ||||||||||| | | || | |||| || Sbjct 731 AACAAGATGCAGTGTTGACTCTTTCTGAATATTGTAATCAGAAAGGGTACGTCCATCTTC 672 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 |||||||| || ||||| || ||||| || ||||| || || ||||| |||||||| || Sbjct 671 TAATTGCTTTCCAGCAAAAATTAAACGTTGCTGATCTGGTGGGATGCCCTCTTTATCCTG 612 Query 101380 AATTTTTTGTTTTACAATTTCT 101401 ||| || ||| ||| ||||| Sbjct 611 AATCTTGGCTTTAACATTTTCT 590 >seq7722 Length=1803 Score = 87.8 bits (96), Expect = 1e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| | ||| || || || ||||| || ||||||||||| | | || | |||| || Sbjct 126 AACAAGATGCAGTGTTGACTCTTTCTGAATATTGTAATCAGAAAGGGTACGTCCATCTTC 67 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 |||||||| || ||||| || ||||| || ||||| || || ||||| |||||||| || Sbjct 66 TAATTGCTTTCCAGCAAAAATTAAACGTTGCTGATCTGGTGGGATGCCCTCTTTATCCTG 7 Query 101380 AATTTT 101385 ||| || Sbjct 6 AATCTT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395762468556882