Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebotomus_20papatasi_20[genbank_20GCA_5F000262795.1_202012-05-16] 106,826 sequences; 363,767,980 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq4578 89.7 3e-13 >seq4578 Length=10518 Score = 89.7 bits (98), Expect = 3e-13 Identities = 128/176 (73%), Gaps = 6/176 (3%) Strand=Plus/Plus Query 25925 ACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTC-TCAT 25983 ||| ||| |||||| | ||| || ||||||| ||||| || | ||| || |||| | Sbjct 4440 ACTCTCTGCATAAACAGATCCGGGATCCACAGAGCATAGAACAGATCCCTTGCTCGTGCC 4499 Query 25984 TTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGG 26043 |||| ||| ||||| ||||| || ||||| || || |||||||| || |||||| || Sbjct 4500 TTCTCCTTGCCCGTG-TTCTTCTTGAGATCCAAAAACTCAAAAATGTCACCGTGCCAGGG 4558 Query 26044 TTCTAAATAGATAGCAAAACTACC--TTTTCTTTTTCCTCCACCTTGATCTACGTA 26097 || | ||||||||||| ||| ||| ||| ||||||||||| ||||| Sbjct 4559 CTCCAGGTAGATAGCAAAGGCACCGGGACGCTTGTTC--CCACCTTGATCAACGTA 4612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252710556627950