Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebotomus_20papatasi_20[genbank_20GCA_5F000262795.1_202012-05-16] 106,826 sequences; 363,767,980 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq1111 360 1e-93 seq7029 331 7e-85 seq8079 241 1e-57 seq844 141 7e-28 seq33278 100 2e-15 seq8055 100 2e-15 seq11529 91.5 1e-12 seq3972 89.7 4e-12 >seq1111 Length=44554 Score = 360 bits (398), Expect = 1e-93 Identities = 795/1183 (67%), Gaps = 8/1183 (1%) Strand=Plus/Plus Query 281377 ATTATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATT 281436 || ||| ||||| ||||| || || ||| ||||| || || | || | ||||| Sbjct 13033 ATCATTTGTAATTGTAATTTTATTCTCTTTCCCAGTTGACTTTTCCACAGCCGACACATG 13092 Query 281437 AAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGC 281496 || || || ||||| | ||||| || |||||||| || || |||| |||| Sbjct 13093 GAGGATGGAGTTAGCATCAATGTCAAAAACTACCTCAATTTGGGGCACTCCTCGAGGAGC 13152 Query 281497 AGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCG 281556 |||||||||||| ||| | |||| ||| ||| |||||| || || || | | Sbjct 13153 TGGTGGGATCCCTGTCAATTCAAATCGTCCTAGAGGATTATTGTCCTTCGTCATAGCCCT 13212 Query 281557 TTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATAC 281616 |||||| || || | || | |||| | | |||||||| |||||||||||||| Sbjct 13213 TTCACCTTCAAACACCTGAACCAGAACTCCCGGCTGATTATCCGAATAAGTTGTAAAGGT 13272 Query 281617 TCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACC 281676 | || || || ||| || || ||||| | | ||||| | ||||||| || || Sbjct 13273 TTGGGTTTGCTTGGTAGGGATCGTGGTGTTACGTTTAATAAGAACAGTCATAACTCCTCC 13332 Query 281677 AGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTT 281736 ||| || || | || ||||| | |||||| ||||| | || | | | |||| | Sbjct 13333 AGCAGTCTCAATTCCCAGAGACAAAGGAGTAACATCCAACAGCAGCAAGTCCTGAACCTC 13392 Query 281737 TTCATCAGTTTGACCAA-CAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTT 281795 ||| | | |||| ||||| | || || |||| ||||| ||||| |||||||||| Sbjct 13393 TTCGGATTTATCACCATGCAAGATT-GCCGCCTGAACCGCAGCTCCATAAGCAACAGCTT 13451 Query 281796 CATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGAAGTTGT 281854 |||| ||||| | | | | ||| |||| || ||||||||||| | |||| || || | Sbjct 13452 CATCCGGATTGATACTCTTATTGAGTTCCTTGCCATTGAAAAATTCCTGAAGCAATTTCT 13511 Query 281855 CTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTA 281914 ||||| ||||| | | |||||| ||||| | ||||| |||| | |||| ||| Sbjct 13512 -GCACCTTCGGAATTCTTGTTGATCCACCAACAAGGACAATCTCATTGATCTGTCCTTTG 13570 Query 281915 TCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCT 281974 |||| ||| | ||| ||| |||| | || ||||| | | ||||||||| ||| Sbjct 13571 TCCATTTTAGCATCTCTTAAGGCTTTAGCCACTGGTTCCATTGTACCTCTAAACAGATCT 13630 Query 281975 GAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAAC 282034 || || |||||||| ||| || |||| | | || |||| |||| |||||| Sbjct 13631 GAGTTGAGCTCTTCGAAACGAGCCCTGGTAATGGAGGTATAGAAATCTGTTCCCTCGAAC 13690 Query 282035 AAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCA 282094 |||||||||| ||||| ||| |||| || | ||| || | | ||||| | ||| Sbjct 13691 AAAGAATCAATCTCAATGTTAGCCTGAGATGATGCAGAAAGCGTCCTCTTAGCTCTCTCA 13750 Query 282095 CATGCTGTCCTTAGTCTTCGTA-AGGCTTTTGCTGATTGATTCAAATCTGTTTTATATTT 282153 || || |||||||| | || || || | ||| | | || ||||| | || | ||| Sbjct 13751 CAAGCGGTCCTTAGACGTCTTAGAGCCCTTTTATTCGAGGTT-AAATCCTTCTTGTGTTT 13809 Query 282154 TCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAA 282213 | || || || | || | | || | |||||| || ||||||||||| || | Sbjct 13810 CCGCTGAAATTCCTGTACGAAGTGATTAACCATACGATTGTCGAAATCTTCACCACCAAG 13869 Query 282214 TTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGT 282273 | ||||| ||| | || | | |||| ||| | || ||||||| | ||| | || Sbjct 13870 ATGAGTATCTCCAGCTGTTGACTTCACTTCGAAGATCCCGTCTTCAATCGTCAAGATAGA 13929 Query 282274 AACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTT 282333 ||||| ||| ||||| || | ||| ||||| | |||||| | || | || Sbjct 13930 TACATCGAAGGTACCACCGCCAAGATCGAAAATCAAGACATTCTTCTCGCCGGAACCCTT 13989 Query 282334 TTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATT 282393 ||||| | ||| || || | ||||| || || |||||||| || || || | ||| || Sbjct 13990 CTTATCCAAACCGTAAGCGATGGCAGCTGCTGTAGGTTCATTGATGATCCTGAGAACGTT 14049 Query 282394 AAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGC 282453 ||||||||||| || | |||||| || ||||| | || ||||||||||| || || Sbjct 14050 GAGACCAGCAATGACACCGGAATCTTTGGTTGCTTGACGCTGGGAATCGTTAAAGTAAGC 14109 Query 282454 AGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTT 282513 || || ||||| || ||||| ||||| | |||| | ||||| ||| |||| || Sbjct 14110 CGGGACCGTAATGACCGCATCAGTTACATTCCTTCCTAGGTAAGCTTCTGCAGTTTCCTT 14169 Query 282514 CATTTTACTTAAAATCATTGATGAAATTTGTTCTGG--AGAAT 282554 ||| || | | || ||| || || |||| |||||| ||||| Sbjct 14170 CATCTTCGTAAGAACCATGGAAGAGATTTCTTCTGGGAAGAAT 14212 Score = 161 bits (178), Expect = 7e-34 Identities = 200/274 (73%), Gaps = 0/274 (0%) Strand=Plus/Plus Query 282606 CATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAAT 282665 |||| ||||| |||| ||||||| |||||||| ||||| ||| | | |||| |||| Sbjct 14324 CATTGATAACAGTAAACGGCCAATGCTTCATATCGGATTGTACAGTAGGATCATCAAAAC 14383 Query 282666 CTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGAT 282725 | ||||| | ||||| || |||||||||||||| | || || | || |||||| Sbjct 14384 GACGTCCAATGAGGCGTTTGGCGTCAAAAATAGTATTATTAGGGTTCATGGCCACTTGAT 14443 Query 282726 ATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTG 282785 || || || |||||||| ||| |||| | || || |||| ||||| || || || | Sbjct 14444 TCTTAGCAGCGTCTCCAATGAGACGTTCAGAGTCCGTGAATGCGACATAGGACGGGGTCG 14503 Query 282786 TGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACAC 282845 |||| || ||||| ||||| ||||| || || ||||| |||| || | || || || | Sbjct 14504 TGCGGTTGCCTTGGTCATTAGCAATGATATCCACTTTTCCATGCTGAAAGACTCCCACGC 14563 Query 282846 AACTAAAAGTTGTTCCTAAATCAATACCAATAGC 282879 | || | || || || |||||||| |||||||| Sbjct 14564 AGCTGTACGTGGTGCCCAAATCAATTCCAATAGC 14597 >seq7029 Length=2705 Score = 331 bits (366), Expect = 7e-85 Identities = 1013/1553 (65%), Gaps = 25/1553 (2%) Strand=Plus/Minus Query 281341 CATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTATTAGTAATAGTAATATTCTT 281400 ||||| ||||| | | ||| |||| |||||| | ||| | || || |||||||| Sbjct 2278 CATTCGATCAATGTCAGCTTGGGAGAGTCTTCCTTTGTCATTCTTGATGGTGATATTCTT 2219 Query 281401 GGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATC 281460 || ||| ||| | || || | ||||| || || |||||||| || | || Sbjct 2218 GGCCTTGCCCGTTCCCATTTCCTTTGCTGAGACATTGAGGATTCCATTGGCGTCTAGGTC 2159 Query 281461 AAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAA 281520 || || ||||| ||||| ||||| || | |||| || ||||| || | || ||| Sbjct 2158 GAAGGTTACTTCGATTTGTGGGACTCCACGGGGAGCTGGAGGGATTCCGGAAAGATCAAA 2099 Query 281521 TGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGT 281580 | |||||| ||| || ||| || | ||||||||||| || | ||||| | Sbjct 2098 TTGTCCCAGGCGATTGTTGTCTCGGGTCATGGCGCGTTCACCCTCAAAGACCTGGATGGA 2039 Query 281581 AACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGT 281640 ||| | | |||||| |||| || |||| || | || || ||| || ||||| Sbjct 2038 GACTCCGGGTTGATTGTCTGCGTAGGTTGAGAAGGTTTGGGTTTGTTTGCAGGGAATCCG 1979 Query 281641 TGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAG 281700 | |||||| || || || |||||||| | || |||||||| || | || || || || Sbjct 1978 GGAGTTTCTCTCGATGATTTTGGTCATGACTCCTCCAGCTGTCTCGATTCCGAGGGACAG 1919 Query 281701 AGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTG--ACCAACAAGA 281758 |||| || || || |||| | | || | ||| ||| |||| || || Sbjct 1918 GGGAGCAACGTCGACCAGGAGGACGTCCTGGATTTTGGAATC--TTTGCTCCCGGTGAGG 1861 Query 281759 ATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTT 281818 || ||||| ||||| || || || || || |||||||| || ||||| | | |||| Sbjct 1860 ATTGCTGCCTGAATGGCGGCTCCGTAGGCGACAGCTTCGTCTGGATTGATTGAGAGATTT 1801 Query 281819 AGTTTTTTACCATTGAAAAAATT-TGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGA 281877 || ||| || ||||| |||| || | || || | || || || || || | ||| Sbjct 1800 AGGGATTTTCCGTTGAAGTAATTCTGGAGGAGATTCT-GAACTTTGGGGATTCGTGTTGA 1742 Query 281878 TCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAAC 281937 |||||||| | ||||| ||||| | |||| ||| |||| || | ||| | | Sbjct 1741 GCCTCCAACCATGACAATGTCATGAATCTGTCCTTTGTCCATCTTAGCGTCCCTCAGGGC 1682 Query 281938 TTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGC 281997 |||||| |||||||| || ||||| || | || || || ||||| || || || Sbjct 1681 TTTTTCCACGGGTTCCAGGGTGGCTCTGAAGAGATCAGAGCAGAGTTCCTCAAAGCGTGC 1622 Query 281998 TCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGT 282057 | | | || | | | ||||| || || | | | ||||| ||||| || | Sbjct 1621 CCGGGAGATTTTGGTGTAAAAGTCAATGCCGTCCAGTAGGGCATCAATCTCAATGGTGGC 1562 Query 282058 TTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAA 282117 || || || || || | | ||||| |||||||||||||| | || | || | | Sbjct 1561 TTCGGTGCTGGAGGAAAGGGTCCTCTTAGCTCGTTCACATGCTGTTCGGAGGCGTC-TCA 1503 Query 282118 GGCTTTTGCTGATTGAT--TCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACAC 282175 || | || |||| | | | || | || | || || ||| || || | | | Sbjct 1502 GGGATCTG-GGATTTGTGGTGAGGTCCTTCTTGAACTTCCTGCGGAATTCCTCGATAAA- 1445 Query 282176 CATG--TTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAG 282233 ||| | || | ||||| ||||| || || || || | | |||| ||| | || | Sbjct 1444 -ATGATTGACCATGCGATTGTCAAAGTCCTCTCCGCCGAGATGGGTATCTCCAGCTGTTG 1386 Query 282234 CTCTTACTTGGAAAAG---TCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCAC 282290 || | || | || || ||| || || | | || | | ||| || ||||| | Sbjct 1385 CTTTCACCTCAAACAGAGATCCCTCATCGATGGTCAGGATGGAAACGTCGAAAGTTCCTC 1326 Query 282291 CACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACG 282350 | |||| ||||||||| || |||||| | ||| | | ||||| || || ||||| | Sbjct 1325 CGCCCAGATCAAAAATCAGCACATTCTTCTCTCCTTTGAGATTTTTGTCCAGGCCATAGG 1266 Query 282351 CAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTC 282410 | | ||||| ||||| |||||||| || || ||||| ||||| || |||||||| || Sbjct 1265 CCAGGGCAGCTGCAGTGGGTTCATTGATGATCCTCAAGACATTGAGGCCAGCAATGACTC 1206 Query 282411 CTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGG 282470 | ||||| || || || || || || ||||| || || || || ||||| || || || | Sbjct 1205 CAGCATCCTTGGTTGCCTGCCTCTGGGAATCATTGAAGTAGGCTGGAACTGTGATGACTG 1146 Query 282471 CATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCA 282530 |||| || ||| | |||| |||||| ||||| | ||||| ||| | | || || Sbjct 1145 CATCCGTCACTGTCTGACCAAGATAAGCCTCAGCTGTCTCCTTCATCTTAATCAGAACCA 1086 Query 282531 TTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTC-ATTTTGATATGATACTTCAAAA 282589 | || |||| ||| || | | || ||| | ||| ||||| || | || | Sbjct 1085 TAGAACTTATTTCTTCAGGGGTAAATCTCTTCGGTTCTCCTTTGA----ATTCCACAGAC 1030 Query 282590 TAT---GGTTTATTACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGA 282646 || || || | | || | || || ||||||||||| | ||| || ||| || Sbjct 1029 AATCGAGGCTTTCCAGCTTCACTGATCACCTTAAATGGCCAGTGTTTAATGTCTTCCTGG 970 Query 282647 ACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTT 282706 | | || || ||| | || ||||| | | || || |||||||| ||||| | Sbjct 969 ATCTTCTGATCGACAAATTTCCTCCCAATAAGCCTCTTGGCGTCAAAAATTGTATTCTTA 910 Query 282707 GGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAAT 282766 ||||| | ||| |||||| || || ||||||||||||| | || || || || || Sbjct 909 GGATTCATTGCCACTTGATTCTTAGCAGCATCTCCAATCAATCGCTCAGTATCCGTGAAA 850 Query 282767 GAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCA 282826 | || || ||||||||||||||||| || || ||||| ||||| ||||| ||||| || Sbjct 849 GCCACGTAGGATGGAGTTGTGCGATTTCCCTGGTCATTGGCAATGATTTCCACTTTCCCG 790 Query 282827 TTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGC 282879 | | | ||||| || || | || || || || ||||| |||||||| Sbjct 789 TGCTCAAAGACACCCACGCAGGAGTACGTGGTGCCCAAGTCAATTCCAATAGC 737 >seq8079 Length=1564 Score = 241 bits (266), Expect = 1e-57 Identities = 628/941 (67%), Gaps = 24/941 (3%) Strand=Plus/Plus Query 281591 TGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTA 281650 ||||| || || || || || ||| | || || ||| ||||| || |||||||| Sbjct 75 TGATTGTCCGAGTACGTGGTGAATGTTTGGGTTTGTTTGGTGGGAATGGTAGTGTTTCTC 134 Query 281651 TCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACA 281710 | || | |||| | |||||||||||| || | ||| | || || || || ||| Sbjct 135 TTGATGAGGACACTCATGACACCACCAGCTGTCTCAATACCCAATGACAGGGGTGTCACA 194 Query 281711 TCAACTAGGACAATATTTTGAAGTTTTTCATCAGTT-TGACCAACAAGAATAGCTGCTTG 281769 || | | | || || || | | || | | || | |||| ||||||||||| || Sbjct 195 TCGAGCAACAGAAGATCCTGCACCTCCTC-TGACTTATCACCATGGAGAATAGCTGCCTG 253 Query 281770 AATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACC 281829 || ||| || ||||| |||||||| ||||| ||||| | | | | ||| || | ||| || Sbjct 254 AACAGCTGCCCCATAGGCAACAGCCTCATCGGGATTGATACTCTTATTGAGATCTTTGCC 313 Query 281830 ATTGAAAAAATTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTA 281888 |||||| || | |||||| | ||| |||||| |||||||| | ||| || ||||| | Sbjct 314 ATTGAAGAAGTCCTGAAGAAGCT-TCTGTACCTTGGGAATACGCGTTGAACCACCAACCA 372 Query 281889 ATACAATTTCATGCACCTGTGAT-TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACG 281947 | ||||| ||||| | ||| | || |||| || | ||| | | | || || || Sbjct 373 ACACAATATCATGGAT-TGTACTCTTGTCCATCTTGGCATCACGAATAGCCTTCTCCACC 431 Query 281948 GGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGA 282007 ||||| | | | |||| || | | || |||||||| ||| | || | Sbjct 432 GGTTCCATTGTCGAACGGAACAGATCAGCATTGAGCTCTTCGAAACGAGCACGTGTGATG 491 Query 282008 GTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAA 282067 | | || | | || | || || |||| ||||||| ||||| ||| ||||| || Sbjct 492 GAGGTATAAAAGTCCGTACCCTCAAACAGTGAATCAATCTCAATGTTAGCCTGAGTTGAT 551 Query 282068 GAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTA----AGGCTT- 282122 || || |||| | || |||||||||||||||||||| || | || | | |||| Sbjct 552 GATGACAGTGTTCTCTTTGCACGTTCACATGCTGTCCTCAGACGACGCAGAGCACGCTTG 611 Query 282123 TTGCTGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT- 282181 || ||| | | ||| | || | || | |||||| || | ||| | ||| | Sbjct 612 TTACTGGTG-----AGATCCTTCTTGTGCTTACGCTTGAATTCCTGCACAAA--ATGATT 664 Query 282182 -ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTAC 282240 || | ||||| ||||| |||||||| ||||| | |||| || | || | | | || Sbjct 665 GACCAAGCGATTGTCAAAGTCTTCACCGCCCAAATGGGTATCCCCGGCTGTGGATTTCAC 724 Query 282241 TTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATC 282300 | || | ||||| |||| | | || | |||||| || ||||| |||| ||| Sbjct 725 CTCAAAGATACCATCATCAATACTGAGAATGGACACATCAAAAGTACCACCGCCCAAATC 784 Query 282301 AAAAATAAGTACATTCATTTCTTTGTCTTGGTTT-TTATCAAGACCATACGCAAAAGCAG 282359 |||||| | |||||| | || || | || || || | ||||| |||| ||||| Sbjct 785 AAAAATCAACACATTCCTCTCCCCA-CTGGCCTTCTTGTCCAACCCATATGCAATAGCAG 843 Query 282360 CAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTT 282419 | |||||||||||||| || || | || ||||| ||||||| ||| | || ||||| | Sbjct 844 CTGCAGTTGGTTCATTGATGATACGCAGTACATTGAGACCAGAAATGGTACCAGCATCCT 903 Query 282420 TAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTA 282479 | || || || | || ||||| || ||||| || ||||| || ||||| |||| || | Sbjct 904 TTGTAGCCTGACGCTGGGAATCATTGAAATAGGCCGGAACGGTGATAACAGCATTAGTCA 963 Query 282480 -CTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTT 282519 | |||| |||| |||||| || || | |||||||| Sbjct 964 CCGTCTTACCCAA-ATAAGCCTCAGCAGTCTCCTTCATTTT 1003 >seq844 Length=54921 Score = 141 bits (156), Expect = 7e-28 Identities = 337/506 (67%), Gaps = 5/506 (1%) Strand=Plus/Minus Query 281981 AGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAA 282040 ||||| || || |||||| || | | ||| | |||| | ||||| || || | Sbjct 47335 AGTTCCTCAAAACGAGCTCTGGTGATTTTTGCATAAAAATCTACACCTTCATGCAGAGCA 47276 Query 282041 TCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCT 282100 |||| |||| | | || ||| ||||| || | | || ||||||||||| || Sbjct 47275 TCAATCTCAAGAGATGCTTCAGTGCTGGAAGAGAGAGTTCTCTTTGCACGTTCACAGGCA 47216 Query 282101 GTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATCTGTTTTATATTTTCTCTTG 282160 || || | | ||| | ||| | || || | ||| | || |||| | |||| Sbjct 47215 GTTCTCAAACGTCGGAGAGCTCTGGCGTTACCCTTGAGATCCTTCTTGAATTTGCGCTTG 47156 Query 282161 AAATCTTCAACACACCATGTT-ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGT 282219 || || ||| | | ||| || || ||||| ||||| ||||| || ||||| | || Sbjct 47155 AATTCCTCAG-AGAAATGGTTCACCAGGCGATTGTCAAAGTCTTCTCCGCCCAAATGGGT 47097 Query 282220 ATTTCCTGACGTAGCTCTTACTTGGAAAAG---TCCATCTTCAAGAGACAAAAGAGTAAC 282276 || || | || | | |||||| || || ||| || |||| |||||||| | || Sbjct 47096 ATCACCAGCAGTTGATTTTACTTCAAACAGAGATCCTTCGTCAATAGACAAAATCGAGAC 47037 Query 282277 ATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTT 282336 ||| || || || |||| || ||||| || |||||| | || | | || || Sbjct 47036 ATCGAAAGTACCTCCTCCCAGGTCGAAAATCAGCACATTCCTCTCACCCTTGAGATTCTT 46977 Query 282337 ATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAG 282396 || |||||||| || || ||||||||||| ||||||||||| |||||| ||| || | Sbjct 46976 GTCCAGACCATAGGCCAAGGCAGCAGCAGTGGGTTCATTAATGATTCTCTGAACGTTCAA 46917 Query 282397 ACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGG 282456 || ||||| || ||||| || ||||| || | || ||||| || ||||| || || Sbjct 46916 GCCCGCAATAACACCGGCATCCTTGGTGGCCTGGCGCTGAGAATCATTGAAATAAGCCGG 46857 Query 282457 AACAGTAATAACGGCATCTGTTACTT 282482 ||| || || || || || |||||| Sbjct 46856 AACTGTGATCACCGCGTCGATTACTT 46831 Score = 127 bits (140), Expect = 2e-23 Identities = 256/376 (68%), Gaps = 4/376 (1%) Strand=Plus/Plus Query 281432 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 281491 ||||| | || |||| |||| | || || |||||||| || | || || ||||| Sbjct 48197 ACATTCAAGATGCCATCAGCATTTAGGTCGAAAGTGACTTCGATCTTGGGAACACCTCTT 48256 Query 281492 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAAT 281551 | || ||||| || || | ||| || ||||||||| ||| ||||| ||||| | Sbjct 48257 GGTGCTGGTGGAATTCCGGTGAGATTGAAGGTTCCCAGAAGATTGTTATCCTTAGTCATG 48316 Query 281552 TTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTA 281611 || ||||||||| || | |||||| ||||| || |||| ||||| || ||||| Sbjct 48317 GCTCTTTCACCCTCAAACACTTGGATGGTAACGGCATTTTGGTTATCGCTGTACGTTGTG 48376 Query 281612 AATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATA 281671 ||| | | ||| || |||||| || ||||| |||| | || ||||||| Sbjct 48377 AATGTTTGTTGCTGTTTGCATGGAATTCGTGAATTTCTCTCAACTAGTTTCGTCATAACT 48436 Query 281672 CCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT-TTTG 281730 ||||| |||||||| | || | ||| || ||||||||||| || || | | || ||| Sbjct 48437 CCACCGGCTGTTTCAATGCCCAAAGACAGTGGAGTGACATCCACAAGAAGGACATCCTTG 48496 Query 281731 AAGTTTTTCATCAG-TTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAA 281789 | | | | | | | ||| ||| ||||| || |||| || || || || || | Sbjct 48497 A--TCTGAGAGCTGCCATCGCCAGAAAGGATAGCAGCCTGAACGGCGGCCCCGTAGGCTA 48554 Query 281790 CAGCTTCATCAGGATT 281805 |||||||||| ||||| Sbjct 48555 CAGCTTCATCGGGATT 48570 >seq33278 Length=5405 Score = 100 bits (110), Expect = 2e-15 Identities = 380/583 (65%), Gaps = 29/583 (5%) Strand=Plus/Minus Query 281236 AACTGCTTGTTTAACACTGTGAGTATAATTTTCTAATTCATTTTTAGAATCAACA-GCAG 281294 || || || |||| ||||| | |||| |||| | |||||| | | ||||| || Sbjct 2899 AATTGATTCTTTAG-ACTGTAGGCATAACTTTCAAGTTCATTCCTTGCCTCAACGCGCTC 2841 Query 281295 CTTTTTTCTTGTTATCTGCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTT 281354 ||| | || |||||| | || |||||| | ||| || ||||||||| |||||| Sbjct 2840 CTTGAGT-TTCTTATCTTCATCGGCAAATTTCTCAGCATCCTTAATCATTCGCTCAAT-- 2784 Query 281355 GATCTTCAG-----AGAATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTT 281409 |||||| | ||| ||| | || ||| ||||| ||| || | || ||| Sbjct 2783 -ATCTTCGGGCGTTAGACGATTCTG--ATCATTGGTAATGACAATCTTTTCAGAATTGCC 2727 Query 281410 TGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGAC 281469 ||| ||||| | || ||| | |||||||||||||||||| | ||||| | || Sbjct 2726 TGTACCCTTATCCTCAGCCTGCACCTGAAGAATACCATTGGCATCAATCTCAAACGACAC 2667 Query 281470 TTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAG 281529 ||||| || || | || || |||| || || || || |||| ||| | |||| Sbjct 2666 CTCAATCTGTGGAATACCCCTTGGAGCCGGCGGAATGCCCGTTAAATCGAATTTACCCAA 2607 Query 281530 ATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGT 281589 || |||||| || || | | ||||| || ||| | | || || || || | || Sbjct 2606 TAAATGATTATCCTTGGTCATTGGACGTTCTCCTTCGTAGACCTGAATCGTGAC-AGTGT 2548 Query 281590 -TTGATTATCTGAATAAGTTGTAAATACTCT-GGATTTTTTACAAGGAATTGTTGTGTTT 281647 ||||| || ||| |||| || | ||| ||| ||||| ||||| |||||| Sbjct 2547 GCTGATTGTCCGAAGCTGTTGAGAAGA-TCTGGGACTTTTTGGTGGGAATAACTGTGTTA 2489 Query 281648 CTATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTG 281707 | ||| | || ||||| | ||| ||| | || || | ||| | | || ||| || Sbjct 2488 CGTGGAATGAGTTTAGTCATGACACCGCCAACAGTCTCAATACCCATTGTCAGTGGATTG 2429 Query 281708 ACATCAACTAGGACAAT---ATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCT 281764 ||||| | |||||||| || | || ||| || || || || | | | Sbjct 2428 ACATCCAAAAGGACAATGGCATCGGTATCTTGTTC-TC-------CCGAC-AGTACACCA 2378 Query 281765 GCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAA 281807 || |||| |||||| ||||| |||||||| ||||| ||||||| Sbjct 2377 GCCTGAACAGCAGCTCCATAGGCAACAGCCTCATCGGGATTAA 2335 Score = 86.0 bits (94), Expect = 5e-11 Identities = 131/186 (70%), Gaps = 3/186 (2%) Strand=Plus/Plus Query 282671 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTG 282730 ||||| | ||||| |||||||| | |||||| ||||| | ||||| || Sbjct 3413 CCAATCAGACGTTTAGCATCAAAGACAGTATTCTCCGGATTTGTCGTCAATTGATTCTTA 3472 Query 282731 GCTGCATCTCCAATCAGATGTTCTGTCTCTG---TAAATGAAACATATGATGGAGTTGTG 282787 || ||||| ||||||| | |||| ||| | |||||| ||||| ||||| || | Sbjct 3473 GCAGCATCACCAATCAAACGTTCACCCTCAGCCGTAAATGCCACATACGATGGTGTAATA 3532 Query 282788 CGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAA 282847 ||||| || |||||||| ||||||||||| || |||||| | |||| || |||| Sbjct 3533 CGATTTCCCTGATCATTGGCAATAATTTCCACACGACCATTCTTGTATACTCCAACACTG 3592 Query 282848 CTAAAA 282853 | |||| Sbjct 3593 CAAAAA 3598 >seq8055 Length=1579 Score = 100 bits (110), Expect = 2e-15 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 282722 TGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGA 282781 |||| |||||| ||||| ||||||| | |||| | || || |||| ||||| || Sbjct 592 TGATTTTTGGCAGCATCGCCAATCAAACGTTCAGAGTCGGTGAATGCTACATAACTAGGC 533 Query 282782 GTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCT 282841 ||||| | ||| ||||| ||||| || || || |||||||| |||| || | || || Sbjct 532 GTTGTCCTATTTCCTTGGTCATTGGCGATTATCTCAACTTTTCCATGCTGAAAGACTCCC 473 Query 282842 ACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGC 282879 || || || | || ||||||||||| |||||||| || Sbjct 472 ACGCAGCTGTATGTGGTTCCTAAATCGATACCAATTGC 435 >seq11529 Length=735 Score = 91.5 bits (100), Expect = 1e-12 Identities = 121/168 (72%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 281341 CATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTATTAGTAATAGTAATATTCTT 281400 ||| |||||||||| || | | | || ||| | ||| ||||| || || || || Sbjct 560 CATCCTCTCAATTTCCTCCTTACTCAGTCGTCCCTTGTCATTGGTAATGGTGATCTTATT 619 Query 281401 GGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATC 281460 ||||| ||||| || || |||||||||||| ||||| ||||||||||| | ||| Sbjct 620 CTCCTTGTTGGTTGACTTCTCCAGGGCAGTCACATTGAGAATTCCATTGGCATCAATATC 679 Query 281461 AAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCC 281508 ||||| || ||||| ||||| || || | |||| ||||| || || Sbjct 680 GAATGTCACCTCAATCTGAGGCACTCCACGTGGAGCCGGTGGAATTCC 727 >seq3972 Length=12899 Score = 89.7 bits (98), Expect = 4e-12 Identities = 128/180 (71%), Gaps = 4/180 (2%) Strand=Plus/Plus Query 637114 AAGAAAA----TTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGG 637169 ||||||| || | || |||| ||| || || || | || || || ||||| | || Sbjct 8685 AAGAAAACGAGTTGTGGTAGATTTTTCATCGCCCAACGTCGCCAAGGAGATGCACGTGGG 8744 Query 637170 ACATTTAAGATCAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACA 637229 ||| | |||||||| || || ||||| ||||| ||| | | | || | | || Sbjct 8745 TCATCTGAGATCAACGATCATCGGTGATTCTATATGTCGCCTTCTTGAGTTCTTCAATCA 8804 Query 637230 CGATGTTTATCGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGC 637289 ||||||| || ||||||||| | |||||||||||||| ||||| |||||| | ||||| Sbjct 8805 CGATGTTCTGCGAATTAATCATATTGGTGATTGGGGAACACAATTTGGTATGCTCATTGC 8864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3735385694846676