Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebotomus_20papatasi_20[genbank_20GCA_5F000262795.1_202012-05-16] 106,826 sequences; 363,767,980 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq7333 226 3e-54 >seq7333 Length=2231 Score = 226 bits (250), Expect = 3e-54 Identities = 501/737 (68%), Gaps = 11/737 (1%) Strand=Plus/Minus Query 146773 TAAACCGCCAGCGCCATGGGGATGGAGGGGTGCGGGTGGTAGCCCTCGAGGGCAAAATCT 146832 ||||| |||| | |||| | ||| ||| || || | |||| | | || ||||||| Sbjct 1712 TAAACTGCCATCTCCATCGCGATCTTGGGATGGGGATTGTAGTCATTCAGCACAAAATCC 1653 Query 146833 TCTGCCCTGAAATCGTCTATGTCCTCCACCCGCCTCAAAATCTTGAGCTTGGGGAAGGG- 146891 || | |||| || || ||||| |||| || ||| ||||||| | |||||||| Sbjct 1652 TCGAACTTGAAGTCCTCAATGTCAGTCACCTTCCGAGAAAACTTGAGCGTTGGGAAGGGC 1593 Query 146892 TCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGC 146951 | ||| | | | || || |||||| ||||| ||||| || || ||||| || || Sbjct 1592 TTTGGGCGACGTAGG-AGTTGCTCTTTCAGAGGCTCAACGTGATTTAGATAGACATGAGC 1534 Query 146952 GTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTA 147011 || ||||| ||||| ||||| ||||| ||||| || | || | |||||| | || Sbjct 1533 ATCTCCCAGAGTGTGGACAAAATCCCCAGGCTTGAGATCAGTTATGTGGGCGATGATTCG 1474 Query 147012 GGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCT 147071 ||||| || | ||||||||| |||||||| || || |||| |||||| || |||| | Sbjct 1473 AGTGAGAAGGGCGTAGCTGGCAATGTTGAATGGAACACCCAAGCCCATATCTGCCGATCG 1414 Query 147072 CTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGGCAC-AGGATGTGGC 147130 || |||| |||||| ||||| ||||| | |||||||||||||| |||| ||| ||| | Sbjct 1413 TTGATACATCTGGCAGGAGAGTTCCCCATTGGCCACGTAAAACT-GCACGAGGCAGTGAC 1355 Query 147131 ACGG-CGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGC 147189 | || || || ||||| ||| | ||| | || ||||| || | | | |||| Sbjct 1354 AGGGTGGGTAGTGCCATTATGGGTAAATCCACAGGATTCCATGCGCTCATGATAATCCGC 1295 Query 147190 CTGCTC-TCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTG 147248 | | || | || ||| | || | || ||| | ||||||| ||||||||||| Sbjct 1294 C-GATCATTTGGCTTCTCCCGGATGCGCTGAATCACCTCCTTCAGCTGATCCACGCCCTG 1236 Query 147249 GCCCCCGTAGTTTGTCCCGCA-GTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGC 147307 || ||||||| | || || | | || ||| |||||||| | |||||| |||| Sbjct 1235 TCCAACGTAGTTATCCTTACATGTGC-CATAGGGGGCTCCAAAGTGACGCCACTGAAAGC 1177 Query 147308 CGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCCGCCCGCTTGAGAAACT 147367 | || |||||||||| || || || || | || ||| ||| | || |||| Sbjct 1176 CATAAACTGGCCCCAAATCACCCTCCTCTCGCTCCGTGAATCCCATTGAATCCAGGAACT 1117 Query 147368 CGGGGGACCCGTGGGCGTCCCAGATGCCCA-CTCCCTTGGCGGAGAGCTCCTTAGAGTCC 147426 | | | || | | |||||| || | | | | || | | ||||| | ||| Sbjct 1116 CCCTTGTACTGTTCCCATTCCAGATCCCAATGTTCTTCTGCTG-CAATTCCTTTGCGTCA 1058 Query 147427 GTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTG 147486 || || |||| ||||||||||| || ||||| || || | |||||| || |||||| Sbjct 1057 GTTGAACCCCTGATGAACCAGATCAATTCCTCAGCTACACCTCGCCAAAACACTCTCTTG 998 Query 147487 GTGGTCAGCAGGGGGAA 147503 |||||||| || ||||| Sbjct 997 GTGGTCAGGAGCGGGAA 981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582708853886400