Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebotomus_20papatasi_20[genbank_20GCA_5F000262795.1_202012-05-16] 106,826 sequences; 363,767,980 total letters Query= NC_027916.2 Length=160358 Score E Sequences producing significant alignments: (Bits) Value seq7333 95.1 1e-14 >seq7333 Length=2231 Score = 95.1 bits (104), Expect = 1e-14 Identities = 185/270 (69%), Gaps = 5/270 (2%) Strand=Plus/Minus Query 31140 TTGCTCTCGGAGACCTTCGATGTGATTGACATAAATATGCGCATCGCCAATAGAGTGTAC 31199 ||||||| ||| || | |||||| | ||| | ||| ||||| || | || ||| || Sbjct 1575 TTGCTCTTTCAGAGGCTCAACGTGATTTAGATAGACATGAGCATCTCCCAGAGTGTGGAC 1516 Query 31200 CAATTCCCCTGGTCTTAGATGGGTCAATTTGGCAATCACATGAACCAAAAGCGCATAACT 31259 || ||||| || | |||| || | | ||| || | || | ||| || || || Sbjct 1515 AAAATCCCCAGGCTTGAGATCAGTTATGTGGGCGATGATTCGAGTGAGAAGGGCGTAGCT 1456 Query 31260 CGCTATGTTGAATGGTACACCCAATCCCAAATCGGCAGATCGTTGATATAACAAACAGGA 31319 || ||||||||||| |||||||| |||| ||| || ||||||||||| | | ||||| Sbjct 1455 GGCAATGTTGAATGGAACACCCAAGCCCATATCTGCCGATCGTTGATACATCTGGCAGGA 1396 Query 31320 AAGTTCATCTCCGGTCACGTAAAATTGAAATAACACATGACAAGG-CGGCAAAGCCATTT 31378 ||||| | || ||||||||| || | | ||||| || || | |||||| Sbjct 1395 GAGTTCCCCATTGGCCACGTAAAACTGCACGAGGCAGTGACAGGGTGGGTAGTGCCATT- 1337 Query 31379 CACAGGT--ATCGACGGGATTCCAAGCGCT 31406 | ||| ||| || |||||||| ||||| Sbjct 1336 -ATGGGTAAATCCACAGGATTCCATGCGCT 1308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512332554773280