Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebotomus_20papatasi_20[genbank_20GCA_5F000262795.1_202012-05-16] 106,826 sequences; 363,767,980 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq186 145 7e-30 seq83690 132 4e-26 >seq186 Length=148488 Score = 145 bits (160), Expect = 7e-30 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || ||| ||||||| ||| | || |||||||| || || || || Sbjct 12944 ATGCAGATCTTTGTGAAGACTTTGACCGGTAAGACCATCACTCTTGAGGTCGAGCCCTCT 13003 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || ||||||||| || || || ||||| || || || ||||| || || || || Sbjct 13004 GATACGATTGAGAATGTGAAGGCTAAGATTCAGGATAAGGAGGGCATTCCCCCAGACCAG 13063 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || ||||| ||| | ||||| || ||| |||| || |||||| Sbjct 13064 CAGCGTCTGATTTTTGCTGGCAAGCAACTTGAAGATGGTCGTACCCTTTCTGACTACAAC 13123 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||||| ||| | ||| | || |||||| | || ||||| || Sbjct 13124 ATTCAGAAGGAGTCTACCCTCCATCTTGTCTTGCGTCTCCGTGGTGGAAT 13173 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || || |||||||||||||| ||| | |||||||| ||||| ||||| || Sbjct 13853 CATGCAAATTTTCGTTAAAACTCTGACCGGAAAGACAATTACTCTGGAAGTTGAACCATC 13912 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | ||||| | |||||| || ||||| || |||||||| || || || || || Sbjct 13913 TGATACAATTGAAAATGTCAAAGCCAAGATTCAGGATAAAGAAGGAATTCCTCCAGACCA 13972 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 || ||||| || | || || |||||| | || || | ||| |||| || ||||| Sbjct 13973 GCAACGTTTGATTTTTGCTGGGAAACAACTTGAGGATGGCCGTACCCTTTCGGACTACAA 14032 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||| || ||||| || ||| | ||| | || ||||| | || ||||| Sbjct 14033 CATCCAGAAGGAATCAACCCTTCATCTTGTGCTGCGTCTTCGTGGTGG 14080 Score = 116 bits (128), Expect = 3e-21 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| || || || ||||| ||| | ||||| ||||| || ||||| || Sbjct 13399 CATGCAGATCTTTGTCAAGACCCTTACCGGAAAGACCATTACCCTTGAGGTCGAACCTTC 13458 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | ||||| | | | | ||| |||| || || || || || ||||| || || Sbjct 13459 TGATACTATTGAAACGTGAAGGCCAAA--TTCAGGATAAGGAGGGGATCCCACCGGACCA 13516 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||||||||| || | ||||| || ||| | ||||| || ||| | || || ||||| Sbjct 13517 ACAGCGTTTGATCTTTGCCGGAAAGCAACTTGAAGATGGTCGTACCCTGTCTGACTACAA 13576 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| ||| | ||| | || | ||| | || ||||| || Sbjct 13577 TATCCAGAAGGAGTCTACCCTCCATCTTGTCCTCCGTCTCCGTGGTGGTAT 13627 >seq83690 Length=433 Score = 132 bits (146), Expect = 4e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| || || || || |||||| | || || ||||| || ||||| || Sbjct 25 CATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTCGAACCTTC 84 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||||| ||||| || || || ||||| ||||| || || || || || Sbjct 85 CGATACTATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCTCCAGACCA 144 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | ||| || || ||||||||||| | || |||| || ||||| Sbjct 145 GCAGCGTCTGATCTTCGCTGGAAAGCAATTGGAAGATGGCCGTACTCTTTCGGACTACAA 204 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||||||| || || | ||| | || | ||| | || ||||| || Sbjct 205 CATTCAAAAGGAATCCACTCTCCATCTTGTCCTCCGTCTCCGTGGTGGTAT 255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434337642587520