Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebotomus_20papatasi_20[genbank_20GCA_5F000262795.1_202012-05-16] 106,826 sequences; 363,767,980 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq7333 116 3e-21 >seq7333 Length=2231 Score = 116 bits (128), Expect = 3e-21 Identities = 442/684 (65%), Gaps = 20/684 (3%) Strand=Plus/Minus Query 118455 GAGTTGGAGTTTCAGTGGCTCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATG 118514 |||||| |||||| ||||||| |||||| | ||||||||||||||| || | || || Sbjct 1578 GAGTTGCTCTTTCAGAGGCTCAACGTGATTTAGATAGACATGAGCATCTCCCAGAGTGTG 1519 Query 118515 TATGAATTCACCAGGTGTAAGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTA 118574 | || || ||||| | || | || | ||| || || || || | | ||| Sbjct 1518 GACAAAATCCCCAGGCTTGAGATCAGTTATGTGGGCGATGATTCGAGTGAGAAGGGCGTA 1459 Query 118575 GCTGGCTACATTAAAAGGAACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCA 118634 |||||| | || || |||||||||| ||||| ||||| |||| || |||| ||||| Sbjct 1458 GCTGGCAATGTTGAATGGAACACCCAAGCCCATATCTGCCGATCGTTGATACATCTGGCA 1399 Query 118635 AGAGAGCTCCCCGTTTGCAACATAAAACTGACTTATGATGTGACATGG-AGGCAGAACCA 118693 ||||| ||||| || || || |||||||| | | |||||| || || || ||| Sbjct 1398 GGAGAGTTCCCCATTGGCCACGTAAAACTGCACGAGGCAGTGACAGGGTGGGTAGTGCCA 1339 Query 118694 TGGAACTCAGTTGGGCAGGATTCCAGGCTGTTAAAACATGCCTTCTGCTATATGG-TTCT 118752 | | | |||||||||| || | | | | || | || ||| |||| Sbjct 1338 TTATGGGTAAATCCACAGGATTCCATGCGCTCATGATAATCCGCCGATCATTTGGCTTCT 1279 Query 118753 ACCTGTATACCCTCAATTAAATTCTGAATCTGATCCACACCCTTTCCAGTATACTGAGAC 118812 || | || | || ||| | | || | ||||||||| |||| |||| || | | | Sbjct 1278 -CCCGGATGCGCTGAATCACCTCCTTCAGCTGATCCACGCCCTGTCCAACGTAGTTATCC 1220 Query 118813 TCGCATCCTTTATATTCTGCCCCAAAAAATCTCCATTGAAAACCATAAACAGGCCCCAGA 118872 | ||| ||| || ||||| | ||| ||||| |||||||| ||||||| | Sbjct 1219 TTACATGTGCCATAGGGGGCTCCAAAGTGACGCCACTGAAAGCCATAAACTGGCCCCAAA 1160 Query 118873 TCTCCCTGGGACCT-AAAATC---TAAACCTACTTTTCTCTGAAATTCTTTTGACCCATT 118928 || |||| ||| || || || | | | | || || ||| | || Sbjct 1159 TCACCCT----CCTCTCGCTCCGTGAATCCCATTGAATCCAGGAACTCCCTTGTACTGTT 1104 Query 118929 AGCATTCCAAATAGCAA-CTCCtttttttGCCAGATCATTAGAGTTTGTAGAACCACTTA 118987 ||||||| || ||| | ||| | || || || || | || || ||||| || | Sbjct 1103 CCCATTCCAGATCCCAATGTTCTTCTGCTG-CAATTCCTTTGCGTCAGTTGAACCCCTGA 1045 Query 118988 AAAACCAAAGAAGCTCCTCAACAACGCCTCTCCAAAAAACTGTTTTTGTTGTAAACAGTG 119047 ||||| | | |||||| | || |||| |||||| ||| | || || || | || | Sbjct 1044 TGAACCAGATCAATTCCTCAGCTACACCTCGCCAAAACACTCTCTTGGTGGTCAGGAGCG 985 Query 119048 GAAACTGACCTCTAAGTGAA-----TATCTTGTTTGTGTTCCAAAAATAGACAGAGTCCC 119102 | || ||| || | ||| | | |||||| |||||| || || ||||| || Sbjct 984 GGAA--GACATCATTGCGAAGGTCGAAGCGCATTTGTGCTCCAAAGATTGAAAGAGTACC 927 Query 119103 AACACCTGTTCTATCATCTCTCTT 119126 |||||||||| |||||||||||| Sbjct 926 TACACCTGTTCGATCATCTCTCTT 903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 413937175297864