Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebotomus_20papatasi_20[genbank_20GCA_5F000262795.1_202012-05-16] 106,826 sequences; 363,767,980 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq18 104 2e-17 >seq18 Length=974545 Score = 104 bits (114), Expect = 2e-17 Identities = 164/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 27787 AAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGC 27846 |||||||| || |||||||| |||||||| |||||| || || | || || ||| | Sbjct 449444 AAAATGCAGATCTTTGTGAAGACTCTTACGGGGAAAACCATCACCTTGGAGGTGGAACCC 449503 Query 27847 ACCGA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904 | || | || | ||| || ||| ||| || ||||| || || |||| || Sbjct 449504 TCAGATACCATTGAAAAT--GTGAAAGCAAAGATTCAGGACAAGGAGGGAATTCCTCCGG 449561 Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964 | ||||| || || || ||||||||||| || | || || | || | |||| |||| Sbjct 449562 ATCAGCAGCGTTTGATCTTTGCCGGAAAGCAGCTTGAGGATGGCCGTACACTGTCGGATT 449621 Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017 |||| ||||| || |||||||| ||||| | || |||||| | ||||| ||| Sbjct 449622 ACAATATCCAGAAGGAGAGCACCCTGCATCTCGTGTTGCGTCTCCGTGGTGGC 449674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355399087839702