Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebotomus_20papatasi_20[genbank_20GCA_5F000262795.1_202012-05-16] 106,826 sequences; 363,767,980 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq7333 122 7e-23 >seq7333 Length=2231 Score = 122 bits (134), Expect = 7e-23 Identities = 228/331 (69%), Gaps = 3/331 (1%) Strand=Plus/Minus Query 29646 TCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTC 29705 |||| || || ||||| | || ||||| |||||||||||||| ||||||||||| || | Sbjct 1567 TCAGAGGCTCAACGTGATTTAGATAGACATGAGCATCTCCCAGAGTGTGGACAAAATCCC 1508 Query 29706 CCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGT 29765 | || | || | || | ||| || || || ||||| || | ||||||||| |||| Sbjct 1507 CAGGCTTGAGATCAGTTATGTGGGCGATGATTCGAGTGAGAAGGGCGTAGCTGGCAATGT 1448 Query 29766 TAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTC 29825 | || || || || | ||||| || | || | || || | |||||| ||||| || | Sbjct 1447 TGAATGGAACACCCAAGCCCATATCTGCCGATCGTTGATACATCTGGCAGGAGAGTTCCC 1388 Query 29826 CGTCGCTCACGTAAAACTGACACATGGCA-TGGCACGG-AGGAAGGGCCATGAGACCCAA 29883 | | | |||||||||||| ||| |||| || || || || || ||||| | || Sbjct 1387 CATTGGCCACGTAAAACTG-CACGAGGCAGTGACAGGGTGGGTAGTGCCATTATGGGTAA 1329 Query 29884 GTCTTTGGGGTTCCAGGCACACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAG 29943 || || ||||| || | || ||| || |||| || | ||| || | || |||| | Sbjct 1328 ATCCACAGGATTCCATGCGCTCATGATAATCCGCCGATCATTTGGCTTCTCCCGGATGCG 1269 Query 29944 GTCCACGGCGTTTTGCAGCTGATCCACCCCC 29974 | | | | | |||||||||||| ||| Sbjct 1268 CTGAATCACCTCCTTCAGCTGATCCACGCCC 1238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405634399121836