Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoebis_20sennae_20[genbank_20GCA_5F001586405.1_202016-03-10] 3,484 sequences; 287,490,372 total letters Query= NC_001824.1 Length=102653 Score E Sequences producing significant alignments: (Bits) Value seq2554 82.4 5e-11 >seq2554 Length=721471 Score = 82.4 bits (90), Expect = 5e-11 Identities = 110/153 (72%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 12780 AATGGTCATGCGACTAGGAAAGGCATGTGGGTTAATGATTAAATCAGGTACTATGCCATC 12839 ||| ||||| ||| |||| ||| || || |||||||| | ||||| || || || Sbjct 375763 AATTGTCATACGAGATGGAATGGCGTGCGGATTAATGATAATGTCAGGAGTTAAACCTTC 375822 Query 12840 TTTAGTGAAAGGCATGTTTTCTTGGGCATAAATCATACCACAGGTACCTTTTTGTGCGGT 12899 ||| |||||||| | |||||| ||| || ||||| |||||||||||| || Sbjct 375823 ACAAGTAAAAGGCATATCTTCTTGTCTATACTGAATTCCACATGTACCTTTTTGTCCGTG 375882 Query 12900 AAAAGAAGCAAATTTATCTCCTATTTCAGGTAT 12932 ||||||||||||||| || |||| ||| || Sbjct 375883 CCGAGAAGCAAATTTATCGCCAATTTGAGGAAT 375915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328350857220136