Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoebis_20sennae_20[genbank_20GCA_5F001586405.1_202016-03-10] 3,484 sequences; 287,490,372 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq995 109 5e-19 >seq995 Length=359585 Score = 109 bits (120), Expect = 5e-19 Identities = 158/223 (71%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285 ||||||| ||| ||| || ||||| || |||||||||||||||| || || |||| Sbjct 124823 CCTCATCCCTAGAAATCAGCTCGTTACTGAAGGTTAATCCTGGCATCAGACCACGCTTTT 124882 Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14345 | ||||| || || | || || ||| || ||||||||||||||||| ||||| || | Sbjct 124883 TCAACCAGAAGATGGAGGCAAAGCTTCCAGAGAAGAATATTCCCTCAACAGCAGCGAAGG 124942 Query 14346 CTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAG 14405 | || | || ||| ||||| | ||| | ||| | |||||| | | ||||| || | Sbjct 124943 CAATAATTCTTTCACCAAAGGTTGCCGTCTTGCTGCCTATCCACTGTAAGGCCCAATCTG 125002 Query 14406 AtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14448 || || || | | | | ||||||||| ||||| || || Sbjct 125003 CCTTCTTCTTTACACAGGGAAGTGTTTCAATTGCATTGAACAA 125045 Score = 100 bits (110), Expect = 3e-16 Identities = 157/222 (71%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 14473 AATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTG 14532 ||||||||| ||||||||||| ||||| || ||||||| || ||||| || ||||| Sbjct 125230 AATGTATGTGTCAATAAGTAATGAGTACATCTCTGAGTGTACATTCTCCATGGCAATCTG 125289 Query 14533 AAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAA 14592 |||||||| ||| ||| ||| |||| | || |||||| | || | ||| ||| Sbjct 125290 GAAACCATAGAAAAATCGAGCCTCTGTCACCTGCACCTCTTGTGAGAAACGTTCCACCAG 125349 Query 14593 ATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTA 14652 || ||||| || || ||||| ||| ||||| ||||| | | | || ||||| | Sbjct 125350 GTTCTCATTGACAATTCCATCCGAAGCAGCAAAGAATGCTAGCACATGCTTGATAAAATG 125409 Query 14653 TTGCTCTTCATTGC-TGAGTTTTTTCCAATCGGCTAAATCCT 14693 | ||| || | | | || ||| |||||| | |||||||| Sbjct 125410 TCTCTC-ACAGTCCTTAAGGCTTTCCCAATCTGATAAATCCT 125450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482324593849120