Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoebis_20sennae_20[genbank_20GCA_5F001586405.1_202016-03-10] 3,484 sequences; 287,490,372 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq3433 176 4e-39 seq170 91.5 1e-13 >seq3433 Length=253125 Score = 176 bits (194), Expect = 4e-39 Identities = 766/1196 (64%), Gaps = 28/1196 (2%) Strand=Plus/Minus Query 35663 AAGCCAATATGCATAGCGTTGAGCAAATCGCCGTTGTCCGCATCGATTTCCCATGCGAAT 35722 |||||| | | |||| ||| || | || || || || ||||| |||||||| || ||| Sbjct 146941 AAGCCA-TGTTCATACTGTTCAGAATGTCACCATTATCTGCATCAATTTCCCACGCAAAT 146883 Query 35723 AATCCGCCGAGTCTACGCTGAAGCACGTATTCGCCTTTGGCCAGTACCG-ATCTTTCGCT 35781 ||||| || | | | |||||||| ||||| | |||| || |||| || | Sbjct 146882 AATCCACCCAAATAATTTTTCCTCACGTATTTACCTTTCTC-AGTAACGGATCTCGCGTT 146824 Query 35782 GTCATACGATATTAAGTCGCCAGAGGCGCGGTC-GAATACGTACGCAGCCTTGGCCACGT 35840 ||| || | | |||||| |||| || |||| ||| || || | || | || |||| Sbjct 146823 GTCGTATGTGACTAAGTCTCCAGTGGAT-GGTCTGAACACATAAGGTGCTTGAGCTACGT 146765 Query 35841 CGTC------GAATGCGTATTCGTAACGCGAAATGTTTTTAGCAATCTGTCTGTAGTCGA 35894 ||| ||| | ||| | | | ||| | ||||| |||| || ||||| | Sbjct 146764 TGTCATAGTGGAACTCCCATTTGCCTTGTGCAATTTCATTAGCGATCTCCCTATAGTCCA 146705 Query 35895 CCACGCCGTTTTCCCATGTACCCGTGATCGGTCCGACGGCTACGCCACTGAATGGATTGT 35954 | ||||||| | |||||| ||| || ||||| || || ||| ||| ||||| Sbjct 146704 CAACGCCGTCCTGCCATGTTCCCTTGCAAGGTCCTGTCGCAACTCCAGAGAAGGGATTAC 146645 Query 35955 CACTGTTGTAGTTGTGGACGCCCGTCCAACCGCGGCCGTACATTGCTACGCCCAACACGA 36014 | || || | ||| || || ||||| || ||||| ||||| || ||||| | || | Sbjct 146644 CCTCTTTATAATCGTGTACTCCGGTCCACCCACGGCCATACATAGCGACGCCTACTACAA 146585 Query 36015 GtttttttGGATTCACTCGTTGCGCGAGCAA--AGCGTCCACGGCCACGTTGGCGGTGTA 36072 || || || || || | ||| || | ||| | || ||| | | || | ||||| Sbjct 146584 TCTTCTTAGGGTTGACACCTTGAGCTAACAAGTACTGTACACCG--AAGTCAGTTGTGTA 146527 Query 36073 CGGTTCGTTAGGTTTCCACGCGGAACCGTACAGTGCCGTCTGATGACCGAGATCGGTATT 36132 || ||| || || |||||| | | | || | || |||||||| || | | ||| Sbjct 146526 CGTTTCCTTCGGATTCCACTCAGGTGCATATAATGAAGTCTGATGTCCTAAAGTATCATT 146467 Query 36133 AGACCAAGCTCCTTTGAAATCATAACTCATCACGAAAATTTTATCTAAATACTGTTGTGC 36192 ||||| || || ||||| || |||||||| | ||| || | || | || | ||| || Sbjct 146466 GGACCAGGCACCCTTGAAGTCGTAACTCATGAGGAATATGTGGTCCATGTAGTTTTGGGC 146407 Query 36193 TCGGTCGTAATTAACCGCGGCGATCTTGTCTATGCCAGCGCTAATCGCTGTGGTGAGTTC 36252 | ||| | | | |||||||| ||| || || || |||| |||||||| Sbjct 146406 AGCTTTGTAGTCGATTACTTGAATCTTGTCCCAGCCGGCACTGATAGCTGATGTGAGTTC 146347 Query 36253 TAAAGTACGATTCGTTTGTATTTGAACTTGATCGAGCATGGCGCGCAATTCGCCCAATAA 36312 | | |||||| | | || | | ||| |||||| || || || Sbjct 146346 GTATTTCTTGCCCGTTTGAAGAGATAATTCGTTTAACATTTCGCGCAGCTCTTTCATCAA 146287 Query 36313 AGCGATATACGTGTTATTGTCGCGTTCCACATCGCCAACGTTTGGATTGGCGCCTTTGCC 36372 || || || | | ||| ||| | ||| | || || || |||||||| Sbjct 146286 TATGACGTAAGTTTCACCGTCT--TTCGGGCT-GCCGAGTTTCTCGTTAGCTCCTTTGCC 146230 Query 36373 GCCCGGAAATTCCCAATCAATATCGATGCCGTCGAAAAATTTCCATGTCAACACAAATTC 36432 || || || ||||| || || |||| ||||| || | |||||| || | | || || Sbjct 146229 TCCGGGGAACTCCCAGTCGATGTCGAGACCGTCAAACATTTTCCAGGTTAGAAGGAACTC 146170 Query 36433 ACGCACGGATTCGACAAAAATTTGTCGCGT---TCGCGCATCGTGCATATGATAGAAGGG 36489 | | || |||| ||| |||| | | | | ||||| | | || |||| || Sbjct 146169 CTTCGCTGAAGCGACGAAACGGTGTCTCTTAACTGGGTCATCGA--AGAAGA-AGAAAGG 146113 Query 36490 ATCGGACAGTGTCCAACCGCCGATTGATGCCAACACTTTTAGATTGGGATTGGCCAATTT 36549 ||| | || ||||| || || || |||| | | || | || || |||| ||| Sbjct 146112 ATCTGCGAGGGTCCAGCCACCAATAGATGGGAGAATCTTCAAATCAGGCCTGGCTTGTTT 146053 Query 36550 TGCTGCCATTAATTGACCAAAATTGCCTTTGTAGGGTTCGTTCCATGCGCTAACGCCTGT 36609 ||||| ||||| || |||||||||||||| ||||| ||||| | | ||| | Sbjct 146052 CAACGCCATCAATTGGCCGAAATTGCCTTTGTAAGGTTCATTCCAGGAAGAGAGTCCTTT 145993 Query 36610 TTGTGGTTTTTGGAGCGCCGCCCACGGATCGTGTATGGAAACTTTAAAATTGTCCCTGCC 36669 ||||| || || | || ||||| ||||| || || || || |||| | || | || Sbjct 145992 CTGTGGCTTCTGCAAAGCGGCCCAGGGATCATGAATCGACACCGTAAAGTCTTCGCGCCC 145933 Query 36670 AGCGCACGATCTTTGCAACGCTTCAAAACTCCCCGTGATAGATTTTAAACTGTCGTTTAT 36729 || ||| || | ||||||||||| ||||| || ||| || |||||||| || || Sbjct 145932 AGAGCATGAGCGTTGCAACGCTTGGAAACTACCTTCGATTTCCTTCAAACTGTCATTGAT 145873 Query 36730 ACCGTCACCGCCGCAAATCGGTATAAATCCGTATA--AAATGTGCGAAAGGTTCGGCGTG 36787 || ||||| || || ||||| || || || |||| | ||| | ||| || || || Sbjct 145872 GCCATCACCACCACAGATCGGGATGAAGCCATATAGCAGATGAGTTAAA--TTAGGAATG 145815 Query 36788 GGCACTTTGTCCACGGGAAAAGATCGACCGTAAACGCCCCATTCGACAAAATAGGC 36843 || || || || ||| | ||| ||| ||||||||||||||||| || || Sbjct 145814 GGGACACGATCGACTGGATACTTTCGCGGGTACACGCCCCATTCGACAAAGTACGC 145759 >seq170 Length=994537 Score = 91.5 bits (100), Expect = 1e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 100603 GCACGGTATACACGTTCACGAGTTCGGCGACACCAGCAACGGATGTACGTCCGCCGGGGA 100662 ||| ||| | ||||| |||||||||||||||| || ||||| || |||||||| || Sbjct 674290 GCATGGTTTCCACGTGCACGAGTTCGGCGACAACACGAACGGCTGCACGTCCGCGGGCCC 674231 Query 100663 ACATTTCAATCCTACGGGCCAAACGCACGGGGCGCCAAACGCGACCGTGCGTCACGTCGG 100722 || ||||| || ||| || |||||| || || | ||| | |||| | ||||| || Sbjct 674230 GCACTTCAACCCCACGAAGCAGGAGCACGGCGCCCCCAGCGCCAGCGTGAGGCACGTGGG 674171 Query 100723 CGACTTGGGCAACGTCGA 100740 |||| | |||||| |||| Sbjct 674170 CGACCTCGGCAACATCGA 674153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418286238289280