Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoebis_20sennae_20[genbank_20GCA_5F001586405.1_202016-03-10] 3,484 sequences; 287,490,372 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq209 614 5e-171 seq286 129 5e-25 seq2618 111 1e-19 seq995 98.7 9e-16 >seq209 Length=133430 Score = 614 bits (680), Expect = 5e-171 Identities = 1208/1779 (68%), Gaps = 15/1779 (1%) Strand=Plus/Minus Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164 ||| || ||||| || || || || || || || ||||| ||||| | ||| ||||| || Sbjct 15039 CTTATCAACTGTGAATTGAATTGCATTAGCAGCTGGTTTTGTGCGTAAATAGTACATTCC 14980 Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG 22224 || ||||| ||||| ||||| || ||||| ||||| || || || ||||||||| | || Sbjct 14979 TGTTTTCAGTCCCATTTTCCAAGCATAAAAGTGTATTGATGTTAACTTTCCATAATTAGG 14920 Query 22225 --CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCG 22282 || |||| | ||||| || || || || || || || || || | ||| || Sbjct 14919 TTCAGCAACATGAATG--TTGAAAGATTGGCTTTGGTCAATGAATGCACCCCTATCAGCA 14862 Query 22283 GCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATC 22342 ||||| | || ||| | || |||||||| || ||||| |||| | ||||| Sbjct 14861 GCCATTTGAATTGTTGTCTTAACTGATATTTCCCAAACTGTCTTATACAAATCTCTGATT 14802 Query 22343 TCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTA 22402 ||| ||||| | ||| || | || | || || || |||||||| || | |||||| Sbjct 14801 TCTTTAGGTATTGCTTCTATATTTTGAATAGAACCATTGTTGTGTATTATAAGATTTTTC 14742 Query 22403 ATCGTATCGTTCCACAAACC-GATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCAC 22461 || || | ||| ||| | | | | | ||||||| | | || || | || ||||| Sbjct 14741 ATGTCTTCATCCCATAAATCTGCTTGTG-TCAAATCCCTAAGCAAGTGGTGATTGACCAC 14683 Query 22462 TTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGA 22521 |||||| || || || || || || | ||| |||||||| || || || ||||| || || Sbjct 14682 TTGAAATTCTCCAGATAATACACGTCTTTGATAAATGTTTGAAGTAAATGGTTCAAATGA 14623 Query 22522 TTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGA 22581 |||||| || || || || || || || || || || ||||| || || | |||| || Sbjct 14622 TTCATTATTACCAAGAATTTGTGCAGTAGATGCCGTGGGCATGGGTGCTAGTAGTAATGA 14563 Query 22582 GTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGA 22641 ||| | | || | ||||| |||||| ||| || | ||||||||||||| ||| || Sbjct 14562 GTTACGAAGACCATTCTTTGCAATTTTTTCCTTAAGAACAGACCAGTCCCACAAATCTGA 14503 Query 22642 CGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTC 22701 || || || ||||||||||| ||||| || | || |||| || || || ||||| Sbjct 14502 TGGTGT---TTTATCCCACATATCATATTGTAAAATTCCTTGACTGGCTGGACTTCCTTC 14446 Query 22702 GTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTA 22761 || || || |||| | || | |||||||| | ||| || ||||| ||||| || Sbjct 14445 ATAAGTGCTATATACTCCATCTTTCTCTGCAAGTTCACTGCTTGCTTCCAAGGCGCCATA 14386 Query 22762 ATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACGGCAT 22821 ||||| || || || |||| | |||||| | | || | ||||| || || || Sbjct 14385 GTATATTGTTTCAAATATTTGTTGGTTCAACTTGATAGCTTTCTCACTTTCATATGGAAT 14326 Query 22822 ACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTT 22881 |||||| | || || | ||| || | ||| ||||| || || || || || | | | Sbjct 14325 ACGCATTAAAACAAAGGTGTCGGCTAGACCTTGAACTCCAATTCCTATGGGCCTATGCCT 14266 Query 22882 CAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAA 22941 ||||| || ||| || || || | || || | || ||| ||| || |||| || Sbjct 14265 AAGATTTGAGTTTTTAGCTTCTGGAACTGGGTAAAAGTTGACATCAATTATTTTGTT-AA 14207 Query 22942 GTTTCTG-GTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGATT 23000 | || || || | ||||| || | ||||| | | || || Sbjct 14206 GATTTTGTGTTATTATTTTGGTCACTTCTTTTAACTTTTCAAAATTGAAAGTTTTATCTT 14147 Query 23001 GTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGG 23060 ||||||| |||| | || || || || | ||| || || || || || ||| | Sbjct 14146 CATTAACAAACATGTTTAGTGCTATTGAAGCCAAATTACAGACTGCAACTTCATCTGATG 14087 Query 23061 ACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCT 23120 | ||||||||||||||||| ||||| |||||||| || ||||| ||||| | ||| | | Sbjct 14086 ATGTGTACTCTACAATTTCAGTACAGAGATTGCTGCATTTTATTGTGCCAAGATTTTTTT 14027 Query 23121 GGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCT 23180 | |||||||||| |||||| || ||||| || | ||||||||| || || ||||| || | Sbjct 14026 GATTGCTTTTTCTATTGCAGGAGTCCTTATATAACATGTACGGTGTTCCAGTCTCCACTT 13967 Query 23181 GCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTACCTGCCTT 23240 | | || | || ||| ||| | |||| || | || | || || | || Sbjct 13966 GAGCTTCTACAATTGCTTTCCATAACATCTGCGCTTTTACTTGCTTAACAAACTTTTTTT 13907 Query 23241 CTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCC-G 23299 ||| || || |||| || | | ||||| || | || |||| || | ||||| | Sbjct 13906 CTTGTTCATATTTTTCATATAGCTTTTCAAACTCTTCTCCCCAACAATCTGAAAGGCCAG 13847 Query 23300 GGCGATTGCAT-CGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAA 23358 ||| || ||| |||||||| | |||||| || || |||||||| | | ||||||| Sbjct 13846 GGCAAT--CATGGGGACACATAATACTCCAATTTTCGTTTTTTTCAACCCTTTTCATAAA 13789 Query 23359 AAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGT 23418 | ||| |||||||| ||||| || |||| || | || || || || ||||| || || Sbjct 13788 TAAATCTGGTATCCAAAGAGCATAAAACAACTCTCTTGCACGGACTTCTTCTTTCCCTGT 13729 Query 23419 GTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGC 23478 || ||||| | ||| || || || || | || |||||||| || || | ||||| || Sbjct 13728 ATTTTTTTTGAGATCTAAGAATTCAAAAATATCTGCATGCCATGGTTCCAAGTAAATAGC 13669 Query 23479 AAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACAC 23538 ||| || || ||||||||||||||||| ||||| || || | || |||||||| || || Sbjct 13668 AAATGCACCAGGTCTCTTATTGCCGCCTTGATCTACATATCTAGCTGTGTTGTTATATAC 13609 Query 23539 TCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTT 23598 ||||| ||| || || | || || || | || | || || | || ||||| Sbjct 13608 TCTTAACATTGGTACCAATCCATTAGAAACTCCATTTGTTCCAGCTATGTAGGACCCTTT 13549 Query 23599 TGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCA 23658 || | | || || || | |||||| || || | ||||| || ||||| || || Sbjct 13548 AGCCCTTATACAATGTACATGTAGACCTATACCACCAGCTGATTTTGAAATCATTGCACA 13489 Query 23659 TTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACA 23718 |||||| ||||| || || || || || || ||||| ||||| | || | |||||||| Sbjct 13488 TTGTTTAAGAGTATCATATATTCCTTCAATACTGTCGTCTTTCATAGCTATTAAGAAACA 13429 Query 23719 CGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAA 23778 ||||| | || | | || ||||| || ||||| ||||| || || || || ||||| Sbjct 13428 AGAAGAAAGCTGTGGCCTCGGAGTAGCAGCAGAGAAAAGTGTTGGACTTGCATGTGTAAA 13369 Query 23779 GTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTAT 23838 |||| | || | | ||||| || | |||||| ||||||| || || || ||||| Sbjct 13368 GTATTTTTCAGATAACAAGTTGTATGTATTGATGGCAGCATCAACATCTTCACCATGTAT 13309 Query 23839 ACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTC 23877 || || || || | ||| | ||| | || |||||||| Sbjct 13308 TCCAATTGCAACTCTCATAAGCATATGCTGTGGTCTCTC 13270 >seq286 Length=933739 Score = 129 bits (142), Expect = 5e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || ||||| ||||| || ||||| ||||| | || || || || || Sbjct 377628 ATGCAAATTTTTGTCAAGACCCTGACTGGTAAAACCATCACATTGGAAGTAGAGCCTTCT 377687 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| || ||| | ||| |||||| || ||| | || || ||||| Sbjct 377688 GACACAATTGAAAACGTTAAAGCAAAAATTCAGGACAAAGAGGGCATTCCTCCAGACCAA 377747 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || ||||| |||||| | ||||| | || | |||||||||| Sbjct 377748 CAGCGTCTTATCTTTGCTGGTAAACAGCTTGAAGATGGTCGCACCCTCTCCGATTATAAC 377807 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || ||||| || || ||||| || ||| | ||||| || |||| Sbjct 377808 ATTCAGAAGGAATCTACCCTCCATCTAGTCCTTCGTCTGAGAGGTGGTA 377856 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || |||||||| ||||||| || || ||||| | || || || || || Sbjct 378996 ATGCAAATATTTGTAAAGACATTGACAGGAAAGACCATCACTTTGGAGGTGGAGCCCTCG 379055 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | || |||||| || ||| | || || ||||| Sbjct 379056 GACACAATTGAGAACGTCAAGGCCAAGATTCAGGACAAAGAGGGCATTCCTCCAGACCAA 379115 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || ||||| |||||| | ||||| | || | |||||||||| Sbjct 379116 CAGCGTCTTATCTTTGCTGGTAAACAGCTTGAAGATGGTCGCACCCTCTCCGATTATAAC 379175 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || ||||| ||||| ||||| || ||| | ||||| || |||| Sbjct 379176 ATTCAGAAGGAATCTACTCTCCATCTAGTCCTTCGTCTGAGAGGTGGTA 379224 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || ||||| ||||||| || || ||||| | || || ||||| || Sbjct 379452 ATGCAAATATTTGTGAAGACATTGACAGGGAAGACCATCACTTTGGAAGTCGAACCTTCG 379511 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | ||| |||||| ||||| | || || |||||| Sbjct 379512 GACACAATTGAGAACGTCAAGGCTAAAATTCAGGACAAAGAAGGTATCCCTCCAGACCAG 379571 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || ||||| ||||| ||||||| | ||| | |||||| || Sbjct 379572 CAGCGTCTGATCTTTGCTGGTAAACAACTGGAAGATGGTCGCACTCTCTCCGATTACAAT 379631 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || ||||| ||||| ||| | || ||| | ||||| || |||| Sbjct 379632 ATCCAGAAGGAATCCACTCTCCATTTAGTCCTTCGTCTGAGAGGTGGTA 379680 Score = 111 bits (122), Expect = 1e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| ||||| || || ||||| || || ||||| || || | || ||||||||| Sbjct 377397 AAGATGCAGATTTTTGTGAAAACTCTTACGGGTAAAACCATTACATTAGAGGTTGAACCG 377456 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| | |||||| || ||| | ||| || || || || | || |||||| Sbjct 377457 TCTGACACTATCGAAAATGTAAAAGCTAAAATTCAAGATAAAGAGGGTATTCCTCCCGAC 377516 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 ||||| | || || || || || || || |||||||| | ||| | ||||||| Sbjct 377517 CAGCAAAGGCTTATTTTTGCCGGAAAGCAATTGGAAGATGGAAGGACCCTCTCCGATTAT 377576 Query 31370 AACATTCAAAAAGAATCGACTCTTCA 31395 ||||||||||| ||||| || ||||| Sbjct 377577 AACATTCAAAAGGAATCTACCCTTCA 377602 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || |||||||| ||||||| || || ||||| | || |||||||| || Sbjct 378540 ATGCAAATATTTGTAAAGACATTGACAGGGAAGACCATCACTTTGGAAGTTGAACCTTCG 378599 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | || ||||| ||||| | || || |||||| Sbjct 378600 GACACAATTGAGAATGTCAAGGCCAAGATTCAAGACAAAGAAGGTATTCCTCCAGACCAG 378659 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || |||||||| ||||| ||||||| | ||| | || || || Sbjct 378660 CAGCGTCTGATTTTCGCTGGTAAACAACTGGAAGATGGTCGCACTCTCTCGGACTACAAT 378719 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || ||||| ||||| ||| | || ||| | ||||| || |||| Sbjct 378720 ATCCAGAAGGAATCCACTCTCCATTTAGTCCTTCGTCTGAGAGGTGGTA 378768 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || ||||| ||||||| || || ||||| | || || || || || Sbjct 379224 ATGCAAATATTTGTGAAGACATTGACAGGAAAGACCATCACTCTGGAGGTGGAGCCTTCG 379283 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | ||| |||||| || ||| | || || |||||| Sbjct 379284 GACACAATTGAGAACGTCAAGGCTAAAATTCAGGACAAAGAGGGCATCCCTCCAGACCAG 379343 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || |||||||| ||||| ||||||| | ||| | ||| || || Sbjct 379344 CAGCGTCTGATCTTCGCTGGTAAACAACTGGAAGATGGTCGCACTCTCTCCGACTACAAT 379403 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || ||||| ||||| ||| | || ||| | ||||| || |||| Sbjct 379404 ATCCAGAAGGAATCCACTCTCCATTTAGTCCTTCGTCTGAGAGGTGGTA 379452 Score = 105 bits (116), Expect = 6e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || |||||| |||| ||||| || ||||| | || |||||||| || Sbjct 781540 ATGCAGATTTTTGTCAAGACTTTGACTGGCAAGACAATCACTTTAGAAGTTGAACCATCA 781599 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | ||| ||||||||||| | || || || ||| Sbjct 781600 GACACCATTGAGAATGTGAAGGCTAAAATCCAAGACAAGGAAGGTATCCCTCCTGATCAG 781659 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 |||||||| || ||||| || || || ||||| || | | | ||| | |||||||| Sbjct 781660 CAGCGTCTTATCTTCGCCGGAAAGCAATTGGAGGA-TGGACGTACTCTATCAGATTATAA 781718 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || ||||| ||||| || ||| | ||| | | ||||| || |||| Sbjct 781719 TATCCAGAAAGAGTCGACACTGCATTTAGTATTACGTCTGAGAGGAGGTA 781768 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || ||||| ||||||| || || ||||| | || || || || || Sbjct 378084 ATGCAAATCTTTGTGAAGACATTGACAGGAAAGACCATCACTTTGGAGGTGGAGCCCTCT 378143 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | || ||||| ||||| | || || || ||| Sbjct 378144 GACACAATTGAGAACGTCAAGGCCAAGATTCAAGACAAAGAAGGTATTCCTCCAGATCAG 378203 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || |||||||| ||||| ||||||| | ||| | || || || Sbjct 378204 CAGCGTCTGATCTTCGCTGGTAAACAACTGGAAGATGGTCGCACTCTCTCAGACTACAAT 378263 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || ||||| ||||| ||| | || ||| | ||||| || |||| Sbjct 378264 ATTCAGAAGGAATCCACTCTCCATTTAGTCCTTCGTCTGAGAGGTGGTA 378312 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || ||||| ||||||| || || ||||| | || || ||||| || Sbjct 379908 ATGCAAATCTTTGTGAAGACATTGACAGGGAAGACCATCACTTTGGAAGTCGAACCTTCG 379967 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | ||| |||||| ||||| | || || |||||| Sbjct 379968 GACACAATTGAGAACGTCAAGGCTAAAATTCAGGACAAAGAAGGTATCCCTCCAGACCAG 380027 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || ||||| ||||| | ||||| | ||| | || || ||| Sbjct 380028 CAGCGTCTGATCTTTGCTGGTAAACAACTAGAAGATGGTCGCACTCTTTCAGACTACAAC 380087 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || || || || ||| | || |||||||| | || | ||||| Sbjct 380088 ATCCAGAAGGAGTCTACTTTACACTTGGTACTTCGTCTACGCGGCGG 380134 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| || || | || ||||| || ||||| | || || ||||| || Sbjct 781996 ATGCAAATTTTCGTCAAAACATTAACTGGCAAGACTATCACTTTAGAAGTGGAACCATCA 782055 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | ||| || ||||||||| | || || |||||| Sbjct 782056 GACACCATTGAGAATGTGAAGGCTAAAATTCAAGATAAGGAAGGCATTCCCCCAGACCAG 782115 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTATAA 31371 || | | || || || || |||||| | ||||| | || || | | || || || Sbjct 782116 CAAAGATTGATTTTTGCAGGAAAACAGCTAGAAGATGGTCGCAC-ATTATCTGACTACAA 782174 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 ||||||||||| || ||||||||| |||| | ||| ||||||| ||| Sbjct 782175 TATTCAAAAAGAGTCTACTCTTCATTTGGTCTTGAGATTGAGGGGAGGT 782223 Score = 86.0 bits (94), Expect = 6e-12 Identities = 160/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| || || | || ||||| || || || | || || ||||| || Sbjct 781768 ATGCAAATTTTCGTCAAAACATTAACTGGCAAGACTATTACTTTAGAAGTGGAACCATCA 781827 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | || | || || | ||| || |||||||| | || || || ||| Sbjct 781828 GATACCATTGAGAATGTGAAGGCTAAAATCCAAGATAAGGAAGGTATCCCTCCTGATCAG 781887 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA---CTCTATGACTATGAGCGATTAT 31369 |||||||| || ||||| || || || ||||| || | || ||||| | |||||| Sbjct 781888 CAGCGTCTTATCTTCGCCGGAAAGCAATTGGAGGATGGCCGTA-CACTATCA--GATTAT 781944 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || ||||| ||||| || ||| | ||| | | ||||| || |||| Sbjct 781945 AATATCCAGAAAGAGTCGACACTGCATTTAGTATTACGTCTGAGAGGAGGTA 781996 >seq2618 Length=201275 Score = 111 bits (122), Expect = 1e-19 Identities = 157/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || |||||||| || || || || || || |||||| | || || || | Sbjct 161859 AAAATGCAGATCTTCGTAAAAACCCTAACGGGTAAGACCATCACCCTTGAGGTGGAGGCT 161800 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||||| | |||||| || || | ||| ||||||||||| | || || ||| Sbjct 161799 TCCGACACTATCGAAAATGTGAAGGCTAAAATCCAAGACAAGGAAGGAATTCCTCCAGAC 161740 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 || |||||| | || |||||||| ||||| ||||| || ||| | ||| || Sbjct 161739 CAACAGCGTTTGATCTTCGCTGGTAAACAATTGGAGGATGGCCGTACTCTTTCCGACTAC 161680 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410 ||||| || || ||||| |||||||| ||||| || || || Sbjct 161679 AACATCCAGAAGGAATCCACTCTTCACCTGGTTCTCAGGCT 161639 >seq995 Length=359585 Score = 98.7 bits (108), Expect = 9e-16 Identities = 165/239 (69%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 57880 TGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAAT 57939 ||||||| || || |||||| | ||| | ||||||||||| ||| | | | | Sbjct 125044 TGTTCAATGCAATTGAAACACTTCCCTGTGTAAAGAAGAAGGCAGATTGGGCCTTACAGT 124985 Query 57940 GGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAG 57999 ||||| ||| ||||| || || | || || | || || ||||| || || || | Sbjct 124984 GGATAGGCAGCAAGACGGCAACCTTTGGTGAAAGAATTATTGCCTTCGCTGCTGTTGAGG 124925 Query 58000 GTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGC 58059 | |||||||| || || |||||||| | || || ||| |||| || || || ||||||| Sbjct 124924 GAATATTCTTCTCTGGAAGCTTTGCCTCCATCTTCTGGTTGAAAAAGCGTGGTCTGATGC 124865 Query 58060 CCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGAtttt 58118 | || | || || || |||||| |||| || | || |||| | ||||| ||||| Sbjct 124864 CAGGATTAACCTTCAGTAACGAGCTGATTTCTAGGGATGAGGTTAGTCATACATATTTT 124806 Score = 98.7 bits (108), Expect = 9e-16 Identities = 98/127 (77%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 57510 GAACCACTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCAGAC 57569 ||||| | |||| ||||| || || ||||||| || || || ||| |||| |||||| Sbjct 125814 GAACCTTTGTTGCGGGAGAACCCGCGGCGATTTGTTATCTTCCCTATTAAATACCCAGAC 125755 Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| ||||| ||||| || || ||||| ||||||||||| || | Sbjct 125754 ATCTGGCAAATGTACAAGAAGGCTGAAGCGTCTTTCTGGACTGTCGAAGAAGTGGATTTA 125695 Query 57630 TCTAAGG 57636 || |||| Sbjct 125694 TCGAAGG 125688 Score = 82.4 bits (90), Expect = 7e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 58320 CATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACA 58379 ||||||||||| || ||||| ||||| || ||||| || ||||| | || || || ||| Sbjct 120743 CATTACAACACCAAGAATCCATTTGACTTCATGAACCTCATCTCCTTGGAAGGGAAAACA 120684 Query 58380 AACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAAATACGGCGTGATG 58427 ||||| ||||| || ||||| |||| || || || | ||||| ||| Sbjct 120683 AACTTCTTCGAGAAGAAAGTCGGCGAGTACCAGAAGTGGGGCGTCATG 120636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445746986873280