Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoebis_20sennae_20[genbank_20GCA_5F001586405.1_202016-03-10] 3,484 sequences; 287,490,372 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq209 535 4e-147 seq995 100 3e-16 >seq209 Length=133430 Score = 535 bits (592), Expect = 4e-147 Identities = 1197/1782 (67%), Gaps = 38/1782 (2%) Strand=Plus/Minus Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849 ||||||||||||| || | ||| | || | |||||| | | ||| |||||||| ||| Sbjct 15035 TCAACTGTGAATTGAATTGCATTAGCAGCTGGTTTTGTGCGTAAATAGTACATTCCTGTT 14976 Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909 || || |||| | |||| | ||||| || || || | ||| | || |||| | | Sbjct 14975 TTCAGTCCCATTTTCCAAGCATAAAAGTGTATTGATGTTAACTTTCCATAATTAGGTTCA 14916 Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATT 36969 | | || || | | ||||| ||||| || || || ||||| || || || |||||| Sbjct 14915 GCAACATGAATGTTGAAAGATTGGCTTTGGTCAATGAATGCACCCCTATCAGCAGCCATT 14856 Query 36970 TCTAAAATACATTTTTGA--GATATCTCCCAAACCGTTTTATATATTTGTTTTATATTAT 37027 | || | | || | ||||| |||||||| || ||||| | | | | || | | Sbjct 14855 TG--AATTGTTGTCTTAACTGATATTTCCCAAACTGTCTTATACAAATCTCTGATTTCTT 14798 Query 37028 CTGGTAAA---TCTAAATGTTGAATAGAACCATTAT---GTAACACAATTGTATTCTTTA 37081 |||| |||| || ||||||||||||||| | ||| | || ||| || | Sbjct 14797 TAGGTATTGCTTCTATATTTTGAATAGAACCATTGTTGTGTATTATAAG---ATTTTTCA 14741 Query 37082 TGTCATTATTCCACATATTTCTACTTATT--AGTTCTCTCAATAGGTGTGGATTTACAAC 37139 |||| | || ||| | || || ||| | | || || | | ||| |||| || || Sbjct 14740 TGTCTTCATCCCATAAAT--CTGCTTGTGTCAAATCCCTAAGCAAGTGGTGATTGACCAC 14683 Query 37140 CTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGA 37199 ||||| |||||||||||||| | |||| ||| || || |||| ||||||||| || Sbjct 14682 TTGAAATTCTCCAGATAATACACGTCTTTGATAAATGTTTGAAGTAAATGGTTCAAATGA 14623 Query 37200 CTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCT 37259 |||||||||| | ||||| | |||||||| || ||||| ||||||| ||| | Sbjct 14622 TTCATTATTACCAAGAATTTGTGCAGTAGATGCCGTGGGCATGGGTGCTAGTAGTAATGA 14563 Query 37260 ATTTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGT 37319 || | | |||| | |||| | | || || || ||| ||||| ||||||| Sbjct 14562 GTTACGAAGACCATTCTTTGCAATTTTTTCCTTAAGAACAGACCAGTCCCACAAATCTGA 14503 Query 37320 TGGGTTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATA 37379 ||| | || ||||||||||||||||| ||| |||| ||| |||||| | | ||| Sbjct 14502 TGGTGTTTTATCCCACATATCATATTGTAAAATTCCTTGACTGGCTGGACTTCCTTCATA 14443 Query 37380 TGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATA 37439 || ||| ||| | | | || ||||| | || | ||| | ||| |||| || Sbjct 14442 AGTGCTATATACTCCATCTTTCTCTGCAAGTTCACTGCTTGCTTCCAAGGCGCCATAGTA 14383 Query 37440 TATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCC 37499 ||||||||| || |||||| || || | | |||| || || || ||| | | Sbjct 14382 TATTGTTTCAAATATTTGTTGGTTCAACTTGATAGCTTTCTCACTTTCATATGGAATACG 14323 Query 37500 CAATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTT 37559 || ||| | ||| || || | ||| ||||| || || |||||||| ||||| | Sbjct 14322 CATTAAAACAAAGGTGTCGGCTAGACCTTGAACTCCAATTCCTATGGGCCTATGCCTAAG 14263 Query 37560 ATTAGATCTAGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATT 37619 ||| || | | |||| ||||| ||| | |||| ||| |||||||| || ||||| Sbjct 14262 ATTTGAGTTTTTAGCTTCTGGAACTGGGTAAAAGTTGACATCAATTATTTTGTTAAGATT 14203 Query 37620 TTTAACTAGTATTTTCGTAATTATTCTCAACTTGTCGAACATAAATACGTTATT---ATT 37676 || || |||||| || | | | | ||||| || || | || |||| ||| Sbjct 14202 TTGTGTTATTATTTTGGTCACTTCTTTTAACTTTTCAAAATTGAAAGTTTTATCTTCATT 14143 Query 37677 AACAAATTTACTCAACGAAATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTACT 37736 |||||| | | | | || || | | |||||| || |||||||||||| | Sbjct 14142 AACAAACATGTTTAGTGCTATTGAAGCCAAATTACAGACTGCAACTTCATCTGATGATGT 14083 Query 37737 AAATTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATT 37796 | | || ||| || ||||||||||| || || | ||||| || | ||| ||||||| Sbjct 14082 GTACTCTACAATTTCAGTACAGAGATTGCTGCATTTTATTGTGCCAAGATTTTTTTGATT 14023 Query 37797 GGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGC 37856 | |||| |||| || || || ||||||| || ||||| ||||| || | |||||| Sbjct 14022 GCTTTTTCTATTGCAGGAGTCCTTATATAACATGTACGGTGTTCCAGTCTCCACTTGAGC 13963 Query 37857 CTCGATAATAGATTTCCATAAACTTCTT-GCTTTAACGATCGCTTTA---AtttttttCT 37912 || | ||| | ||||||||| | ||| ||||| || | |||| | | |||||| Sbjct 13962 TTCTACAATTGCTTTCCATAA-CATCTGCGCTTTTAC--TTGCTTAACAAACTTTTTTTC 13906 Query 37913 TTGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTG 37972 ||||| | |||| | ||||| || | ||| || | ||||| ||| | | || | Sbjct 13905 TTGTT-CATATTTTTCATATAGCTTTTCAAACTCTTCTCCCCAACAATCTGAAAGGCCAG 13847 Query 37973 GACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATA 38032 | || || |||||||| | | ||| | ||| | |||||| || | || |||||||| Sbjct 13846 GGCAATCATGGGGACACATAATACTCCAATTTTCGTTTTTTTCAACCCTTTTCATAAATA 13787 Query 38033 AATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACAT 38092 |||| |||| ||| | ||| ||| || ||| | | | |||||| |||||| || Sbjct 13786 AATCTGGTATCCAAAGAGCATAAAACAACTCTCTTGCACGGACTTCTTCTTTCCCTGTAT 13727 Query 38093 TCTTTCTTA-AGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGAC 38151 | ||| | | | || |||| || || ||||| || ||||||||||| | ||||| | Sbjct 13726 TTTTTTTGAGATCTAAGAAT-TCAAAAATATCTGCATGCCATGGTTCCAAGTAAATAGCA 13668 Query 38152 ATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATT 38211 | ||| || ||||| |||| || || |||| | ||||||| ||||||| ||||||| | Sbjct 13667 AATGCACCAGGTCTCTTATTGCCGCCTTGATCTACATATCTAGCTGTGTTGTTATATACT 13608 Query 38212 CTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTA 38271 |||||||| ||||| | |||||||| || ||| | || | ||| || | || ||| Sbjct 13607 CTTAACATTGGTACCAATCCATTAGAAACTCCATTTGTTCCAGCTATGTAGGACCCTTTA 13548 Query 38272 GCTCGTATA----TTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGC 38327 || | |||| ||| | | || ||||| ||||| || |||||| || | || Sbjct 13547 GCCCTTATACAATGTACATGTAGA----CCTATACCACCAGCTGATTTTGAAATCATTGC 13492 Query 38328 GCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAA 38387 |||||||| | |||||| |||| ||||| |||||||| || || || | || || || Sbjct 13491 ACATTGTTTAAGAGTATCATATATTCCTTCAATACTGTCGTCTTTCATAGCTATTAAGAA 13432 Query 38388 ACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTAT 38447 |||| ||| | || ||| ||||| | || || | ||| ||| ||||||| | Sbjct 13431 ACAAGAAGAAAGCTGTGGCCTCGGAGTAGCAGCAGAGAAAAGTGTTGGACTTGCATGTGT 13372 Query 38448 GAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTG 38507 || ||||||| || || | || ||||| | || || |||| | ||| | || || Sbjct 13371 AAAGTATTTTTCAGATAACAAGTTGTATGTATTGATGGCAGCATCAACATCTTCACCATG 13312 Query 38508 AATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTC 38549 || || | | || ||||| |||||||| |||||||| || Sbjct 13311 TATTCCAATTGCAACTCTCATAAGCATATGCTGTGGTCTCTC 13270 >seq995 Length=359585 Score = 100 bits (110), Expect = 3e-16 Identities = 139/194 (72%), Gaps = 3/194 (2%) Strand=Plus/Plus Query 11681 AATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCA 11740 || |||||||| ||||||| || || ||||| | ||| || || | ||||| ||| Sbjct 124852 AAGGTTAATCCTGGCATCAGACCACGCTTTTTCAACCAGAAGATGGAGGCAAAGCTTCCA 124911 Query 11741 GAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATA---TACCTTG 11797 || |||||||||||||| ||||| || || || | | |||||| ||| | | || | Sbjct 124912 GAGAAGAATATTCCCTCAACAGCAGCGAAGGCAATAATTCTTTCACCAAAGGTTGCCGTC 124971 Query 11798 TTGCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCT 11857 ||||| |||||| | | ||||||||| || ||||| ||||| || | |||||| Sbjct 124972 TTGCTGCCTATCCACTGTAAGGCCCAATCTGCCTTCTTCTTTACACAGGGAAGTGTTTCA 125031 Query 11858 ATAGCGTTAAATAA 11871 || || || || || Sbjct 125032 ATTGCATTGAACAA 125045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468504395744960