Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoebis_20sennae_20[genbank_20GCA_5F001586405.1_202016-03-10] 3,484 sequences; 287,490,372 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq995 109 5e-19 >seq995 Length=359585 Score = 109 bits (120), Expect = 5e-19 Identities = 158/223 (71%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953 ||||||| ||| ||| || ||||| || |||||||||||||||| || || |||| Sbjct 124823 CCTCATCCCTAGAAATCAGCTCGTTACTGAAGGTTAATCCTGGCATCAGACCACGCTTTT 124882 Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013 | ||||| || || | ||||| || || ||||||||||||||||| ||||| || | Sbjct 124883 TCAACCAGAAGATGGAGGCAAAGCTTCCAGAGAAGAATATTCCCTCAACAGCAGCGAAGG 124942 Query 14014 CTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAG 14073 | || | || ||| ||||| | ||| | ||| | |||||| | | ||||| || | Sbjct 124943 CAATAATTCTTTCACCAAAGGTTGCCGTCTTGCTGCCTATCCACTGTAAGGCCCAATCTG 125002 Query 14074 AtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14116 || || || | | | | ||||||||| ||||| || || Sbjct 125003 CCTTCTTCTTTACACAGGGAAGTGTTTCAATTGCATTGAACAA 125045 Score = 87.8 bits (96), Expect = 2e-12 Identities = 152/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 14141 AATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTG 14200 ||||||||| ||||||||||| ||||| || ||||||| || ||||| || ||||| Sbjct 125230 AATGTATGTGTCAATAAGTAATGAGTACATCTCTGAGTGTACATTCTCCATGGCAATCTG 125289 Query 14201 AAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAA 14260 |||||||| || ||| ||| || | | || || || | || | ||| ||| Sbjct 125290 GAAACCATAGAAAAATCGAGCCTCTGTCACCTGCACCTCTTGTGAGAAACGTTCCACCAG 125349 Query 14261 ATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTA 14320 || ||||| || || ||||| ||| ||||| ||||| | | | || ||||| | Sbjct 125350 GTTCTCATTGACAATTCCATCCGAAGCAGCAAAGAATGCTAGCACATGCTTGATAAAATG 125409 Query 14321 TTGCTCTTCATTGTTGAGTTTTTTCCAATCGGATAAATCCT 14361 | ||| | || || ||| |||||| |||||||||| Sbjct 125410 TCTCTCACAGTCCTTAAGGCTTTCCCAATCTGATAAATCCT 125450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479707107845600