Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoebis_20sennae_20[genbank_20GCA_5F001586405.1_202016-03-10] 3,484 sequences; 287,490,372 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq995 114 1e-20 >seq995 Length=359585 Score = 114 bits (126), Expect = 1e-20 Identities = 159/223 (71%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 13682 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13741 ||||||| ||| ||| || ||||| || |||||||||||||||| || || |||| Sbjct 124823 CCTCATCCCTAGAAATCAGCTCGTTACTGAAGGTTAATCCTGGCATCAGACCACGCTTTT 124882 Query 13742 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 13801 | ||||| || || | || || ||| || ||||||||||||||||| ||||| || | Sbjct 124883 TCAACCAGAAGATGGAGGCAAAGCTTCCAGAGAAGAATATTCCCTCAACAGCAGCGAAGG 124942 Query 13802 CTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAG 13861 | || | || ||| ||||| | ||| | ||| | |||||| | | ||||| || | Sbjct 124943 CAATAATTCTTTCACCAAAGGTTGCCGTCTTGCTGCCTATCCACTGTAAGGCCCAATCTG 125002 Query 13862 AtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAA 13904 || || || | | | | |||||| ||||||||||| || Sbjct 125003 CCTTCTTCTTTACACAGGGAAGTGTTTCAATTGCATTGAACAA 125045 Score = 102 bits (112), Expect = 8e-17 Identities = 155/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 13929 AATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTG 13988 ||||||||| ||||||||||| ||||| || ||||||| || || || || ||||| Sbjct 125230 AATGTATGTGTCAATAAGTAATGAGTACATCTCTGAGTGTACATTCTCCATGGCAATCTG 125289 Query 13989 AAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAA 14048 |||||||| ||| ||| ||| |||| | || ||||| | || | ||| ||| Sbjct 125290 GAAACCATAGAAAAATCGAGCCTCTGTCACCTGCACCTCTTGTGAGAAACGTTCCACCAG 125349 Query 14049 GTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTA 14108 ||| ||||| ||||| ||||| ||| ||||| ||||| | | | || ||||| | Sbjct 125350 GTTCTCATTGACAATTCCATCCGAAGCAGCAAAGAATGCTAGCACATGCTTGATAAAATG 125409 Query 14109 TTGCTCTTCATTGTTGAGTTTTTTCCAATCGGCTAAATCCT 14149 | ||| | || || ||| |||||| | |||||||| Sbjct 125410 TCTCTCACAGTCCTTAAGGCTTTCCCAATCTGATAAATCCT 125450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478567957457760