Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoebis_20sennae_20[genbank_20GCA_5F001586405.1_202016-03-10] 3,484 sequences; 287,490,372 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq3433 206 2e-48 >seq3433 Length=253125 Score = 206 bits (228), Expect = 2e-48 Identities = 773/1197 (65%), Gaps = 25/1197 (2%) Strand=Plus/Plus Query 30232 TACTTTGTAGAGTGGGGTGTTTACGACAGACAATATCCAGCAGACTTAGTTCCCGTCCCC 30291 |||||||| || ||||| || ||| || | ||||||| || || ||| | || Sbjct 145762 TACTTTGTCGAATGGGGCGTGTACCCGCGAAAGTATCCAGTCGATCGTGTCCCCATTCCT 145821 Query 30292 AACCTTACGCATCTTTTGTATGGCTTTGTGCCTCTCTGCGGTGGAGATGGTATAAACGAT 30351 || | || ||||| | |||||||| | || |||| ||||| ||||| || || || Sbjct 145822 AATTTAACTCATCTGCTATATGGCTTCATCCCGATCTGTGGTGGTGATGGCATCAATGAC 145881 Query 30352 AGCTTAAAGCAAGTGCCGGGTTCGTTTGAGGCTTTACAAAAATCTTGCGCGGGTCGAGAG 30411 || || ||| || | ||| || | || || ||| || ||| | || || || Sbjct 145882 AGTTTGAAGGAAATCGAAGGTAGTTTCCAAGCGTTGCAACGCTCATGCTCTGGGCGCGAA 145941 Query 30412 GATTTTAAAGTGACGATTCACGATATTTGGGGCGCTCTTCAAAAACCACAAAAAGGAGTG 30471 || |||| ||| ||||||| ||| |||| |||| | || || ||||| |||||| | Sbjct 145942 GACTTTACGGTGTCGATTCATGATCCCTGGGCCGCTTTGCAGAAGCCACAGAAAGGACTC 146001 Query 30472 GGCGCTTGGGACGATCCGTATAAAGGAAATTTTGGCCAACTGATGGCGATTAAAAGACAC 30531 | ||| | || || || ||||| ||||| |||||| |||||||| | ||| | | Sbjct 146002 TCTTCCTGGAATGAACCTTACAAAGGCAATTTCGGCCAATTGATGGCGTTGAAACAAGCC 146061 Query 30532 AATCCCGACCTTACGATTTTACCGTCTATTGGCGGGTGGACACTTAGCGACCCTTTCTTT 30591 | || || | | |||| | || |||||||| || ||||| || || |||||||| Sbjct 146062 AGGCCTGATTTGAAGATTCTCCCATCTATTGGTGGCTGGACCCTCGCAGATCCTTTCTTC 146121 Query 30592 AAATTGAGTTCTGCCGAAAATCG-CGCCGTTTTCGTTGAGTCCGCACGAGAGTATTTGCG 30650 || | | | || | | |||||| ||| | || || |||| | | Sbjct 146122 TTCTTCGATGACCCAGTTAAGAGACACCGTTT-CGTCGCTTCAGCGAAGGAGTTCCTTCT 146180 Query 30651 CACATGGAAATTTTTTGACGGACTAGACATCGACTGGGAGTTTCCGGGCGGTAAAGGTGC 30710 || |||||| | |||||||| || ||||||||||||||||| || || || ||||| || Sbjct 146181 AACCTGGAAAATGTTTGACGGTCTCGACATCGACTGGGAGTTCCCCGGAGGCAAAGGAGC 146240 Query 30711 TAATCCCGAATTAGGAGATCCAGAAAAGGATGGAGTAACATATGTGCAGTTATTGAAAGA 30770 ||| | ||| | | || |||| || || | ||| || || || ||||||| Sbjct 146241 TAA-CGAGAAACTCGGCAGCCCGAAA--GACGGTGAAACTTACGTCATATTGATGAAAGA 146297 Query 30771 GCTCAGAGAAATGCTAAACGATCTTTCTAAAGAAACAGGGAAAAAATACCAGCTCACCTC 30830 ||| | |||||| ||||||| | ||| |||| || || |||||| | ||||| || Sbjct 146298 GCTGCGCGAAATGTTAAACGAATTATCTCTTCAAACGGGCAAGAAATACGAACTCACATC 146357 Query 30831 GGCGATTAGCGCGGGGTACGATAAAATCTCTA-TAGTTAATTATGAAAATGCGCAAGAGT 30889 || || || || || | || || || || | || | | || || ||| ||| | | Sbjct 146358 AGCTATCAGTGCCGGCTGGGACAAGAT-TCAAGTAATCGACTACAAAGCTGCCCAAAACT 146416 Query 30890 ATCTTGATCACATTTTTGTTATGACGTACGATTTTAAAGGCGCTTGGTCTAACACGGACT 30949 | | || ||||| || | |||| ||||| || || || || ||||| || | Sbjct 146417 ACATGGACCACATATTCCTCATGAGTTACGACTTCAAGGGTGCCTGGTCCAATGATACTT 146476 Query 30950 TGGGATATCACACTACACTTTATTCACCCTCTTGGAACGCTGAAGAAAAATATACTGCCG 31009 | ||| |||| ||| || | ||| |||| ||||| | | |||| || || | | Sbjct 146477 TAGGACATCAGACTTCATTATATGCACCTGAGTGGAATCCGAAGGAAACGTACACAACTG 146536 Query 31010 AGTACGCGACAAAGGAGTTGTTAAAACAAAACGTCAATAGTAAGAAAATAGTGCTAGCTG 31069 | | || | || | |||||| ||| ||||| |||||| || || ||| | Sbjct 146537 ACTTCGGTGTACAGTACTTGTTAGCTCAAGGTGTCAACCCTAAGAAGATTGTAGTAGGCG 146596 Query 31070 TTGCAATGTACGGAAGAGGGTGGACGGGTGTGCATGACATAAAAAACAACAATCCCTTTA 31129 | || ||||| || | |||||||| || || || || ||| | |||||||| Sbjct 146597 TCGCTATGTATGGCCGTGGGTGGACCGGAGTACACGATTATAAAGAGGGTAATCCCTTCT 146656 Query 31130 CGGGTGTAGCTCAGGGGCCGATTAAAGGAACTTGGGAAAGTGGAGTTGTAGATTACA--A 31187 | || || || || || || ||||| ||| | || ||||| || || | Sbjct 146657 CTGGAGTTGCGACAGGACCTTGCAAGGGAACATGGCAGGACGGCGTTGTGGACTATAGGG 146716 Query 31188 AGAT-----TTGA---TACA-AAGGTACACCGACACTT--ATTATGACTCTGTAGCGCAA 31236 |||| ||| | || |||| | | | | || | |||||| ||||| ||| Sbjct 146717 AGATCGCTAATGAAATTGCACAAGGCA-AATGGGAGTTCCACTATGACAACGTAGCTCAA 146775 Query 31237 GCGGCATATGCGTTCGCAGAGAAT--GTTGGTGATCTACTTACTTACGATAACCCAACGA 31294 || | |||| ||| |||| || ||| || || | || ||||| ||| | | Sbjct 146776 GCACCTTATGTGTT--CAGACCATCCACTGGAGACTTAGTCACATACGACAACGCGAGAT 146833 Query 31295 GTGTGCAAGCTAAGGGAAAGTTTGTAATAGACAACAATTTGGGTGGTTTGTTTGCGTGGG 31354 || | || || || | || | | || |||||||||| || |||||||||| Sbjct 146834 CCGTTACTGAGAAAGGTAAATACGTGAGGAAAAATTATTTGGGTGGATTATTTGCGTGGG 146893 Query 31355 AACTGGACGCCGACAATGGCGACATTCTTAACAGCATGAACGAGGGTTTAGGTAATA 31411 || | || || || ||||| |||||||| ||||| |||||| || ||| || |||| Sbjct 146894 AAATTGATGCAGATAATGGTGACATTCTGAACAGTATGAACATGGCTTTGGGCAATA 146950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421233313147484