Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phoebis_20sennae_20[genbank_20GCA_5F001586405.1_202016-03-10]
3,484 sequences; 287,490,372 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq995 150 2e-31
seq134 134 2e-26
seq2771 132 5e-26
seq2158 132 5e-26
seq2115 131 2e-25
>seq995
Length=359585
Score = 150 bits (166), Expect = 2e-31
Identities = 164/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421
|||||||| || || | | || ||||| || || || ||||||||||| ||||| |||
Sbjct 125231 ATGTATGTGTCAATAAGTAATGAGTACATCTCTGAGTGTACATTCTCCATGGCAATCTGG 125290
Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481
|| || |||||| ||| ||| || || | |||||| ||||| || || | || || ||
Sbjct 125291 AAACCATAGAAAAATCGAGCCTCTGTCACCTGCACCTCTTGTGAGAAACGTTCCACCAGG 125350
Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541
|| |||||||| || ||||| || || ||||| || || | | |||||| |||||||||
Sbjct 125351 TTCTCATTGACAATTCCATCCGAAGCAGCAAAGAATGCTAGCACATGCTTGATAAAATGT 125410
Query 93542 TTCTCATCATCTTTAAGCTTATCCCAATCGGATAGATC 93579
||||| || ||||| | |||||||| |||| |||
Sbjct 125411 CTCTCACAGTCCTTAAGGCTTTCCCAATCTGATAAATC 125448
Score = 87.8 bits (96), Expect = 2e-12
Identities = 104/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 93581 TTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCC 93640
|| || | ||| ||||||||||||||||| || || ||||| || || |||||||| | |
Sbjct 125690 TTCGATAAATCCACTTCTTCGACAGTCCAGAAAGACGCTTCAGCCTTCTTGTACATTTGC 125749
Query 93641 CATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAAC 93700
|| |||||| | |||| ||| || || || ||||| || ||||| || | ||
Sbjct 125750 CAGATGTCTGGGTATTTAATAGGGAAGATAACAAATCGCCGCGGGTTCTCCCGCAACAAA 125809
Query 93701 GGCTCTAGTTGTGGGTCAAAC 93721
|| || || || |||||||||
Sbjct 125810 GGTTCCAGCTGAGGGTCAAAC 125830
>seq134
Length=256719
Score = 134 bits (148), Expect = 2e-26
Identities = 88/95 (93%), Gaps = 3/95 (3%)
Strand=Plus/Plus
Query 126258 TATTTACA-GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-- 126314
|||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 136528 TATTCACAAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGA 136587
Query 126315 TCGGGAGCGTGGGTTCGAACCCCACACCTGACAAA 126349
|||||||||||||||||||||||||||||||||
Sbjct 136588 GAGGGAGCGTGGGTTCGAACCCCACACCTGACAAA 136622
>seq2771
Length=261584
Score = 132 bits (146), Expect = 5e-26
Identities = 82/87 (94%), Gaps = 2/87 (2%)
Strand=Plus/Plus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322
||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 65022 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 65081
Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349
|||||||||||||||||||||||||||
Sbjct 65082 GTGGGTTCGAACCCCACACCTGACAAA 65108
>seq2158
Length=500010
Score = 132 bits (146), Expect = 5e-26
Identities = 82/87 (94%), Gaps = 2/87 (2%)
Strand=Plus/Minus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322
||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 467489 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 467430
Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349
|||||||||||||||||||||||||||
Sbjct 467429 GTGGGTTCGAACCCCACACCTGACAAA 467403
>seq2115
Length=348658
Score = 131 bits (144), Expect = 2e-25
Identities = 81/86 (94%), Gaps = 2/86 (2%)
Strand=Plus/Plus
Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323
|||||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct 270912 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGCG 270971
Query 126324 TGGGTTCGAACCCCACACCTGACAAA 126349
||||||||||||||||||||||||||
Sbjct 270972 TGGGTTCGAACCCCACACCTGACAAA 270997
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556836548712160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |