Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoebis_20sennae_20[genbank_20GCA_5F001586405.1_202016-03-10] 3,484 sequences; 287,490,372 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq995 150 2e-31 seq134 134 2e-26 seq2771 132 5e-26 seq2158 132 5e-26 seq2115 131 2e-25 >seq995 Length=359585 Score = 150 bits (166), Expect = 2e-31 Identities = 164/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 |||||||| || || | | || ||||| || || || ||||||||||| ||||| ||| Sbjct 125231 ATGTATGTGTCAATAAGTAATGAGTACATCTCTGAGTGTACATTCTCCATGGCAATCTGG 125290 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481 || || |||||| ||| ||| || || | |||||| ||||| || || | || || || Sbjct 125291 AAACCATAGAAAAATCGAGCCTCTGTCACCTGCACCTCTTGTGAGAAACGTTCCACCAGG 125350 Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541 || |||||||| || ||||| || || ||||| || || | | |||||| ||||||||| Sbjct 125351 TTCTCATTGACAATTCCATCCGAAGCAGCAAAGAATGCTAGCACATGCTTGATAAAATGT 125410 Query 93542 TTCTCATCATCTTTAAGCTTATCCCAATCGGATAGATC 93579 ||||| || ||||| | |||||||| |||| ||| Sbjct 125411 CTCTCACAGTCCTTAAGGCTTTCCCAATCTGATAAATC 125448 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 93581 TTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCC 93640 || || | ||| ||||||||||||||||| || || ||||| || || |||||||| | | Sbjct 125690 TTCGATAAATCCACTTCTTCGACAGTCCAGAAAGACGCTTCAGCCTTCTTGTACATTTGC 125749 Query 93641 CATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAAC 93700 || |||||| | |||| ||| || || || ||||| || ||||| || | || Sbjct 125750 CAGATGTCTGGGTATTTAATAGGGAAGATAACAAATCGCCGCGGGTTCTCCCGCAACAAA 125809 Query 93701 GGCTCTAGTTGTGGGTCAAAC 93721 || || || || ||||||||| Sbjct 125810 GGTTCCAGCTGAGGGTCAAAC 125830 >seq134 Length=256719 Score = 134 bits (148), Expect = 2e-26 Identities = 88/95 (93%), Gaps = 3/95 (3%) Strand=Plus/Plus Query 126258 TATTTACA-GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-- 126314 |||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 136528 TATTCACAAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGA 136587 Query 126315 TCGGGAGCGTGGGTTCGAACCCCACACCTGACAAA 126349 ||||||||||||||||||||||||||||||||| Sbjct 136588 GAGGGAGCGTGGGTTCGAACCCCACACCTGACAAA 136622 >seq2771 Length=261584 Score = 132 bits (146), Expect = 5e-26 Identities = 82/87 (94%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct 65022 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 65081 Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349 ||||||||||||||||||||||||||| Sbjct 65082 GTGGGTTCGAACCCCACACCTGACAAA 65108 >seq2158 Length=500010 Score = 132 bits (146), Expect = 5e-26 Identities = 82/87 (94%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct 467489 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 467430 Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349 ||||||||||||||||||||||||||| Sbjct 467429 GTGGGTTCGAACCCCACACCTGACAAA 467403 >seq2115 Length=348658 Score = 131 bits (144), Expect = 2e-25 Identities = 81/86 (94%), Gaps = 2/86 (2%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct 270912 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGCG 270971 Query 126324 TGGGTTCGAACCCCACACCTGACAAA 126349 |||||||||||||||||||||||||| Sbjct 270972 TGGGTTCGAACCCCACACCTGACAAA 270997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556836548712160