Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoebis_20sennae_20[genbank_20GCA_5F001586405.1_202016-03-10] 3,484 sequences; 287,490,372 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq995 116 7e-21 >seq995 Length=359585 Score = 116 bits (128), Expect = 7e-21 Identities = 142/193 (74%), Gaps = 3/193 (2%) Strand=Plus/Minus Query 42829 AGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCT 42888 |||| |||| | ||||| |||||||| ||||| | ||||| ||| ||||| Sbjct 121901 AGGGCTTGCACACCGACTTCGCCTGCCTGATGTTCAAG---CACCTGGTGCAGAAGCCGA 121845 Query 42889 CGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCA 42948 ||| || | || ||||||| ||||||||| |||||| |||||||||| | Sbjct 121844 GCCGCTCGCGCGTGCTGGGCATCATCCGCGAGGCCGTGCTCATCGAGCAGGAGTTCCTGA 121785 Query 42949 CGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCC 43008 || | ||||||||||| |||| ||||||||||| ||||||||||| | |||||||| Sbjct 121784 CGGACGCGCTGCCCGTGCGCCTGCTCGGCATGAACTGCGACCTCATGTCCGAGTACATCG 121725 Query 43009 AGTACGTCGCCGA 43021 ||| ||| ||||| Sbjct 121724 AGTTCGTGGCCGA 121712 Score = 87.8 bits (96), Expect = 3e-12 Identities = 157/224 (70%), Gaps = 4/224 (2%) Strand=Plus/Minus Query 42610 TGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACT 42669 ||||||| || || || || | ||||| | ||||||||||| || ||||| | | | Sbjct 125044 TGTTCAATGCAATTGAAACACTTCCCTGTGTAAAGAAGAAGGCAGATTGGGCCTTACAGT 124985 Query 42670 GGATCGAGAGTCCCGACG-CAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAG 42728 |||| | || | |||| |||| || || || || | | ||||| | || || ||| Sbjct 124984 GGATAGGCAG-CAAGACGGCAACCTTTGGTGAAAGAATTATTGCCTTCGCTGCTGTTGAG 124926 Query 42729 GGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGAT 42787 || || |||||||| || ||| ||||||||||||||| | || || ||| | ||| Sbjct 124925 GGAATATTCTTCTCTGGAAGCTTTGCCTCCATCTTCTGGTTGAAAAAGCGTGGTCT-GAT 124867 Query 42788 GCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831 ||| ||| | |||||| ||||| || || ||||| |||| Sbjct 124866 GCCAGGATTAACCTTCAGTAACGAGCTGATTTCTAGGGATGAGG 124823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944298074027840