Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoebis_20sennae_20[genbank_20GCA_5F001586405.1_202016-03-10] 3,484 sequences; 287,490,372 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq286 138 3e-27 >seq286 Length=933739 Score = 138 bits (152), Expect = 3e-27 Identities = 145/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||||||||| || | || || ||||| || || ||||| ||||| |||||| Sbjct 781730 TCTTTCTGGATATTATAATCTGATAGAGTACGTCCATCCTCCAATTGCTTTCCGGCGAAG 781671 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || |||||||| ||| | ||||| ||||| || || |||||||| || ||||| || Sbjct 781670 ATAAGACGCTGCTGATCAGGAGGGATACCTTCCTTGTCTTGGATTTTAGCCTTCACATTC 781611 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || | ||| ||||| | ||||| ||||| || |||| ||||||||| Sbjct 781610 TCAATGGTGTCTGATGGTTCAACTTCTAAAGTGATTGTCTTGCCAGTCAAAGTCTTGACA 781551 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 781550 AAAATCTGCAT 781540 Score = 136 bits (150), Expect = 9e-27 Identities = 169/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | || | ||| || | ||| | ||| ||| || |||||||| || |||| | Sbjct 379678 CCACCTCTCAGACGAAGGACTAAATGGAGAGTGGATTCCTTCTGGATATTGTAATCGGAG 379619 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 || ||||| || ||||| | |||||| || || |||||||||||||| || ||| Sbjct 379618 AGAGTGCGACCATCTTCCAGTTGTTTACCAGCAAAGATCAGACGCTGCTG---GTCTGGA 379562 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| |||||||| ||||| ||||| || || ||||| || || | || | ||| Sbjct 379561 GGGATACCTTCTTTGTCCTGAATTTTAGCCTTGACGTTCTCAATTGTGTCCGAAGGTTCG 379502 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | ||||| |||||||| |||| ||||| || ||||| ||||| Sbjct 379501 ACTTCCAAAGTGATGGTCTTCCCTGTCAATGTCTTCACAAATATTTGCAT 379452 Score = 132 bits (146), Expect = 1e-25 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | || | ||| || | ||| | ||| ||| || |||||||| ||||||| | Sbjct 379450 CCACCTCTCAGACGAAGGACTAAATGGAGAGTGGATTCCTTCTGGATATTGTAGTCGGAG 379391 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 || ||||| || ||||| | |||||| || ||||||||||||||||| || ||| Sbjct 379390 AGAGTGCGACCATCTTCCAGTTGTTTACCAGCGAAGATCAGACGCTGCTG---GTCTGGA 379334 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| || ||||| ||||| ||||| || || ||||| || || | || | || Sbjct 379333 GGGATGCCCTCTTTGTCCTGAATTTTAGCCTTGACGTTCTCAATTGTGTCCGAAGGCTCC 379274 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| || |||| ||||| || ||||| ||||| Sbjct 379273 ACCTCCAGAGTGATGGTCTTTCCTGTCAATGTCTTCACAAATATTTGCAT 379224 Score = 129 bits (142), Expect = 1e-24 Identities = 146/196 (74%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||||||||| || || | ||| || || || ||||| ||||| ||||| || || Sbjct 781047 TTCCTTTTGGATATTGTAATCAGAGAGTGTACGCCCATCTTCCAATTGCTTTCCAGCAAA 780988 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| || |||||||| | ||||| ||||| ||||| || || || || || || || Sbjct 780987 GATAAGTCGCTGTTGGTCAGGAGGGATACCTTCCTTATCTTGAATCTTAGCCTTTACATT 780928 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| || | ||| | ||||||||| ||||| || || || || |||| || || || Sbjct 780927 TTCAATGGTATCCGATGGTTCTACTTCTAGCGTTATTGTTTTGCCAGTCAATGTTTTCAC 780868 Query 288462 GAATATCTGCATTATG 288477 || |||||||||||| Sbjct 780867 AAAGATCTGCATTATG 780852 Score = 125 bits (138), Expect = 2e-23 Identities = 167/231 (72%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | || | ||| || ||||| | || ||| || || || ||||| |||| | Sbjct 377854 CCACCTCTCAGACGAAGGACTAGATGGAGGGTAGATTCCTTCTGAATGTTATAATCGGAG 377795 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 || ||||| || ||||| | ||||| || || ||||| ||||||||||| ||| Sbjct 377794 AGGGTGCGACCATCTTCAAGCTGTTTACCAGCAAAGATAAGACGCTGTTG---GTCTGGA 377738 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || ||||| ||||| ||||| ||||| |||||||| || | || | ||| Sbjct 377737 GGAATGCCCTCTTTGTCCTGAATTTTTGCTTTAACGTTTTCAATTGTGTCAGAAGGCTCT 377678 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| | ||||| || || || ||||| |||||||| || || |||||| Sbjct 377677 ACTTCCAATGTGATGGTTTTACCAGTCAGGGTCTTGACAAAAATTTGCATT 377627 Score = 125 bits (138), Expect = 2e-23 Identities = 169/234 (72%), Gaps = 6/234 (3%) Strand=Plus/Minus Query 288243 ATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTC 288302 || ||| ||||| || | |||||| | || | || || || ||||| || ||||| Sbjct 380138 ATTTCCGCCGCGTAGACGAAGTACCAAGTGTAAAGTAGACTCCTTCTGGATGTTGTAGTC 380079 Query 288303 GGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATC 288362 | || ||||| || ||||||| |||||| || || |||||||||||||| || || Sbjct 380078 TGAAAGAGTGCGACCATCTTCTAGTTGTTTACCAGCAAAGATCAGACGCTGCTG---GTC 380022 Query 288363 T---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGA 288419 | ||||| |||||||| ||||| ||||| || || ||||| || || | || | Sbjct 380021 TGGAGGGATACCTTCTTTGTCCTGAATTTTAGCCTTGACGTTCTCAATTGTGTCCGAAGG 379962 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| ||||| | ||||| |||||||| |||| ||||| || || || ||||| Sbjct 379961 TTCGACTTCCAAAGTGATGGTCTTCCCTGTCAATGTCTTCACAAAGATTTGCAT 379908 Score = 123 bits (136), Expect = 6e-23 Identities = 145/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||||||||| || | || |||||||| ||||| | ||||| || || || Sbjct 781275 TTCCTTTTGGATATTATAATCAGAAAGAGTGCGTCCATCTTCAAGCTGTTTACCAGCAAA 781216 Query 288342 GATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 || || | ||| || ||||| ||||||||| ||||| |||||||| || ||||| Sbjct 781215 AATAAGTCTCTGCTGG---TCTGGAGGGATTCCTTCCTTATCTTGGATTTTAGCCTTCAC 781159 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 ||||| |||| || | ||| ||||| | ||||| ||||| || || | |||||| Sbjct 781158 ATTTTCAATAGTGTCTGATGGTTCAACTTCCAATGTGATTGTCTTGCCAGTTAAAGTCTT 781099 Query 288459 GACGAATATCTGCAT 288473 || || |||||||| Sbjct 781098 AACAAAGATCTGCAT 781084 Score = 123 bits (136), Expect = 6e-23 Identities = 145/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||| ||||||||||| || | || |||||||| ||||| | ||| || || ||||| Sbjct 781503 TTCTTTCTGGATATTATAATCAGAAAGAGTGCGTCCATCTTCAAGTTGCTTACCAGCGAA 781444 Query 288342 GATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 || || | ||| || ||||| ||||||||| ||||| |||||||| || ||||| Sbjct 781443 AATAAGTCTCTGCTGG---TCTGGAGGGATTCCTTCCTTATCTTGGATTTTAGCCTTCAC 781387 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 ||||| || | || | ||| ||||| | ||||| || || || |||| |||||| Sbjct 781386 ATTTTCAATGGTGTCAGATGGTTCCACTTCCAATGTGATGGTTTTGCCAGTCAAAGTCTT 781327 Query 288459 GACGAATATCTGCAT 288473 || || |||||||| Sbjct 781326 AACAAAGATCTGCAT 781312 Score = 123 bits (136), Expect = 6e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||||||||| || | || || || || || || ||||| ||||| |||||| Sbjct 781958 TCTTTCTGGATATTATAATCTGATAGTGTACGGCCATCCTCCAATTGCTTTCCGGCGAAG 781899 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || |||||||| ||| | ||||| ||||| ||||| |||||||| || ||||| || Sbjct 781898 ATAAGACGCTGCTGATCAGGAGGGATACCTTCCTTATCTTGGATTTTAGCCTTCACATTC 781839 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| | ||| ||||| | || || ||||| || || | || |||||| Sbjct 781838 TCAATGGTATCTGATGGTTCCACTTCTAAAGTAATAGTCTTGCCAGTTAATGTTTTGACG 781779 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 781778 AAAATTTGCAT 781768 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | || | ||| || ||||| | || ||| || ||||| || ||||| | | Sbjct 378994 CCACCTCTCAGACGAAGGACTAGATGGAGGGTAGATTCCTTCTGGATGTTGTAGTCCGAG 378935 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||| | ||| |||||||| |||||||| | |||||| | ||| Sbjct 378934 AGGGTGCGACCATCTTCAAGTTGCTTTCCTGCAAAGATCAGTCTCTGTTGGTCAGGGGGG 378875 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || |||||||| ||||| || || || || || || || || | || | || || Sbjct 378874 ATGCCTTCTTTGTCCTGAATCTTGGCCTTGACATTCTCAATTGTGTCCGAGGGCTCCACC 378815 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | ||||| |||||||| |||| ||||| || ||||||||||| Sbjct 378814 TCCAAAGTGATGGTCTTCCCTGTCAATGTCTTCACAAATATCTGCAT 378768 Score = 118 bits (130), Expect = 3e-21 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | || | ||| || | ||| | ||| ||| || |||||||| ||||| | | Sbjct 378766 CCACCTCTCAGACGAAGGACTAAATGGAGAGTGGATTCCTTCTGGATATTGTAGTCCGAG 378707 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 || ||||| || ||||| | |||||| || ||||| ||||||||||| || ||| Sbjct 378706 AGAGTGCGACCATCTTCCAGTTGTTTACCAGCGAAAATCAGACGCTGCTG---GTCTGGA 378650 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || |||||||| || || || || || || || || || || | || | ||| Sbjct 378649 GGAATACCTTCTTTGTCTTGAATCTTGGCCTTGACATTCTCAATTGTGTCCGAAGGTTCA 378590 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | ||||| |||||||| |||| ||||| || ||||| ||||| Sbjct 378589 ACTTCCAAAGTGATGGTCTTCCCTGTCAATGTCTTTACAAATATTTGCAT 378540 Score = 109 bits (120), Expect = 1e-18 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | || | ||| || | ||| | ||| ||| || || ||||| ||||| | | Sbjct 378310 CCACCTCTCAGACGAAGGACTAAATGGAGAGTGGATTCCTTCTGAATATTGTAGTCTGAG 378251 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 || ||||| || ||||| | |||||| || ||||||||||||||||| || |||| Sbjct 378250 AGAGTGCGACCATCTTCCAGTTGTTTACCAGCGAAGATCAGACGCTGCTG---ATCTGGA 378194 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || |||||||| || || || || || || ||||| || || | || | || Sbjct 378193 GGAATACCTTCTTTGTCTTGAATCTTGGCCTTGACGTTCTCAATTGTGTCAGAGGGCTCC 378134 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||||| ||||| || |||| ||||| || || || ||||| Sbjct 378133 ACCTCCAAAGTGATGGTCTTTCCTGTCAATGTCTTCACAAAGATTTGCAT 378084 Score = 100 bits (110), Expect = 7e-16 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | || | ||| || ||||| | || ||| || || || ||||| |||| | Sbjct 379222 CCACCTCTCAGACGAAGGACTAGATGGAGAGTAGATTCCTTCTGAATGTTATAATCGGAG 379163 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 || ||||| || ||||| | ||||| || || ||||| ||||||||||| ||| Sbjct 379162 AGGGTGCGACCATCTTCAAGCTGTTTACCAGCAAAGATAAGACGCTGTTG---GTCTGGA 379106 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || ||||| ||||| || || || || ||||| || || | || | || Sbjct 379105 GGAATGCCCTCTTTGTCCTGAATCTTGGCCTTGACGTTCTCAATTGTGTCCGAGGGCTCC 379046 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||||| ||||| || |||| ||||| || ||||| ||||| Sbjct 379045 ACCTCCAAAGTGATGGTCTTTCCTGTCAATGTCTTTACAAATATTTGCAT 378996 Score = 98.7 bits (108), Expect = 2e-15 Identities = 139/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 |||||||| ||||| ||||| | | ||||| || ||||||| ||||||||||| || Sbjct 782186 TCTTTTTGAATATTGTAGTCAGATAATGTGCGACCATCTTCTAGCTGTTTTCCTGCAAAA 782127 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| | || || |||||| || ||||| ||||| || ||||| || ||||| Sbjct 782126 ATCAATCTTTGCTG---GTCTGGGGGAATGCCTTCCTTATCTTGAATTTTAGCCTTCACA 782070 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || | ||| ||||| | ||||| ||||| || || | || ||| Sbjct 782069 TTCTCAATGGTGTCTGATGGTTCCACTTCTAAAGTGATAGTCTTGCCAGTTAATGTTTTG 782010 Query 288460 ACGAATATCTGCAT 288473 ||||| || ||||| Sbjct 782009 ACGAAAATTTGCAT 781996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179601741702152