Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoebis_20sennae_20[genbank_20GCA_5F001586405.1_202016-03-10] 3,484 sequences; 287,490,372 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq3433 127 2e-24 seq286 123 3e-23 seq3313 104 3e-17 seq786 96.9 4e-15 seq716 96.9 4e-15 seq3417 95.1 1e-14 seq1289 95.1 1e-14 seq212 95.1 1e-14 seq1183 91.5 2e-13 seq746 91.5 2e-13 seq2713 89.7 6e-13 seq2627 89.7 6e-13 seq1692 89.7 6e-13 seq332 89.7 6e-13 seq100 89.7 6e-13 seq2115 87.8 2e-12 seq2618 84.2 2e-11 >seq3433 Length=253125 Score = 127 bits (140), Expect = 2e-24 Identities = 770/1226 (63%), Gaps = 39/1226 (3%) Strand=Plus/Plus Query 94975 GGGGCTTATTTTGTAGAATGGGGCGTGTACGATCGTAAGTTTCCCGCGGACAAGGTGCCC 95034 || || || ||||| ||||||||||||||| || |||| ||| | || || ||| Sbjct 145756 GGCGCGTACTTTGTCGAATGGGGCGTGTACCCGCGAAAGTATCCAGTCGATCGTGTCCCC 145815 Query 95035 ATTCCCAATCTGACGCATCTATTGTACGGTTTCATACCCATTTGCGGAGGCGACGGTATC 95094 ||||| ||| | || ||||| | || || ||||| || || || || || || || ||| Sbjct 145816 ATTCCTAATTTAACTCATCTGCTATATGGCTTCATCCCGATCTGTGGTGGTGATGGCATC 145875 Query 95095 AACGACAGTCTAAAACAGGTACCCGGCTCTTTTGAGGCTTTACAAAAATCATGTGCCGGC 95154 || |||||| | || | | || ||| | || || ||| ||||| | || Sbjct 145876 AATGACAGTTTGAAGGAAATCGAAGGTAGTTTCCAAGCGTTGCAACGCTCATGCTCTGGG 145935 Query 95155 AGAGACGATTTCAAGGTTAGCATCCACGACATTTACGGTGCTCTACAAAAACCGCAAAAA 95214 | || || || | ||| || || || | | ||| | || || || || ||| Sbjct 145936 CGCGAAGACTTTACGGTGTCGATTCATGATCCCTGGGCCGCTTTGCAGAAGCCACAGAAA 145995 Query 95215 GGTGTTTCCGAATACAATGAACCTTACCGTGGCAATTTTGGCCAGCTCATGGCTATTCGC 95274 || | || | |||||||||||| |||||||| ||||| | ||||| | Sbjct 145996 GGACTCTCTTCCTGGAATGAACCTTACAAAGGCAATTTCGGCCAATTGATGGCGTTG--- 146052 Query 95275 AAACAT---AATCCTCATTTGAAAATTTTGCCTAGCATCGGTGGTTGGACACTGAGCGAC 95331 ||||| | ||| ||||||| ||| | || || ||||| ||||| || || Sbjct 146053 AAACAAGCCAGGCCTGATTTGAAGATTCTCCCATCTATTGGTGGCTGGACCCTCGCAGAT 146112 Query 95332 CCTTTCTATTTTTTCGCCGACGACTATAAACGAAAAGTATTTGTGGACTCTGTTCGTGAA 95391 ||||||| || |||| ||| ||| || | || || | || | || Sbjct 146113 CCTTTCTTCTTCTTCGATGACCCAGTTAAGAGACACCGTTTCGTCGCTTCAGCGAAGGAG 146172 Query 95392 TTCTTGCAAGTGTGGAAGTTTTTCGATGGAGTAGACATCGACTGGGAGTTTCCCGGCGGA 95451 ||| | | | ||||| | || || || | ||||||||||||||||| ||||| || Sbjct 146173 TTCCTTCTAACCTGGAAAATGTTTGACGGTCTCGACATCGACTGGGAGTTCCCCGGAGGC 146232 Query 95452 AAGGGTGCCAACCCCGACGTAGGCGATCCTAGCGTGGATGGAAACACATATGTAACTCTA 95511 || || || ||| | | ||| || | | | || || | || || | | Sbjct 146233 AAAGGAGCTAACGAGAAACTCGGCAGCCCGAAAGACGGTGAAA---CTTACGTCATATTG 146289 Query 95512 TTGAAAGAACTACGCCTAATGCTAGACGAACTGGGTGTGGTGAACAAACGCGTG-----T 95566 ||||||| || ||| |||| || ||||| | | | |||||| | | Sbjct 146290 ATGAAAGAGCTGCGCGAAATGTTAAACGAATTATCTCTT-----CAAACGGGCAAGAAAT 146344 Query 95567 ACGAGTTGACCAGCGCCGTGGGAGCGGGCTACGATAAAATAGACGTGATAGATTACTCTT 95626 |||| | || || | | || |||| || || || | || || || ||| Sbjct 146345 ACGAACTCACATCAGCTATCAGTGCCGGCTGGGACAAGATTCAAGTAATCGACTACAAAG 146404 Query 95627 CGGCTAGTCAATATTTGGATCATGTGTTTTTAATGAGTTACGACTTTAAAGGCGCATGGT 95686 | || | || |||| || | || | |||||||||||||| || || || |||| Sbjct 146405 CTGCCCAAAACTACATGGACCACATATTCCTCATGAGTTACGACTTCAAGGGTGCCTGGT 146464 Query 95687 CCAACACGGATTTGGGTCATCAAACACCATTGTACGCACCTTCGTGGAACCCTGACGACA 95746 |||| ||| || ||||| || |||| || |||||| |||||| || | || | Sbjct 146465 CCAATGATACTTTAGGACATCAGACTTCATTATATGCACCTGAGTGGAATCCGAAGGAAA 146524 Query 95747 AGTACACAACTGACTATGCCGTAAAAGAACTGCTTAAGCAAAAAGTACCTTCC--AACAA 95804 |||||||||||||| | || | || ||| || ||| || || | || || || Sbjct 146525 CGTACACAACTGACTTCGGTGT-ACAGTACTTGTT-AGCTCAAGGTGTCAACCCTAAGAA 146582 Query 95805 AATTGTTGTGGGAGTCGCCATGTACGGCAGAGGGTGGAGTGGTGTGCACGATTACAAAAA 95864 ||||| || || ||||| ||||| ||| | ||||||| || || |||||||| ||| | Sbjct 146583 GATTGTAGTAGGCGTCGCTATGTATGGCCGTGGGTGGACCGGAGTACACGATTATAAAGA 146642 Query 95865 CAATAACGTATTTACGGGCGTCGCCACAGGTCCGGTAAAAGGCACATGGGAAAACGGTGT 95924 ||| || | || || || ||||| || || || |||||| | |||| || Sbjct 146643 GGGTAATCCCTTCTCTGGAGTTGCGACAGGACCTTGCAAGGGAACATGGCAGGACGGCGT 146702 Query 95925 CGTCGATTATAGGCA---AGTTAACGATTTTAAAAACAGTCCAGCTTACACTTACGCTTA 95981 || || |||||| | | ||| || || ||| || | | || | | || Sbjct 146703 TGTGGACTATAGGGAGATCGCTAATGAAATT--GCACAAGGCAAATGGGAGTTCCAC-TA 146759 Query 95982 CGACAAAGTGGCCGAGGCGCCGTACGTTTACGGCGGATCCGACCAGGCGTTGGA-TCTGA 96040 ||||| || || | || || || || | || ||||| | |||| || | Sbjct 146760 TGACAACGTAGCTCAAGCACCTTATGT--------GTTCAGACCATCCACTGGAGACTTA 146811 Query 96041 -TTTCTTACGACGACACGTCGTCGGTATTAGCCAAAGGCGATTACGTGTTACAGAATAAT 96099 | | |||||| || || || || | ||||| | |||||| | ||| || Sbjct 146812 GTCACATACGACAACGCGAGATCCGTTACTGAGAAAGGTAAATACGTGAGGAAAAATTAT 146871 Query 96100 TTAGGTGGTTTGTTTGCATGGGAAATAGATGCCGATAATGGTGATTTGTTAAACGCCATG 96159 || ||||| || ||||| |||||||| ||||| ||||||||||| | | ||| ||| Sbjct 146872 TTGGGTGGATTATTTGCGTGGGAAATTGATGCAGATAATGGTGACATTCTGAACAGTATG 146931 Query 96160 AACACAGGTCTGGGCAACAGCCCTGC 96185 |||| | | ||||||| ||||| || Sbjct 146932 AACATGGCTTTGGGCAATAGCCCGGC 146957 >seq286 Length=933739 Score = 123 bits (136), Expect = 3e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||| ||||||| |||||||||||||| || || || ||||| ||||||| Sbjct 781539 ACCACCTCTCAAACGCAGGACCAAATGCAATGTAGATTCTTTCTGGATATTATAATCAGA 781480 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||||| || | || || || |||||||||||||| || |||| ||||||||| | || Sbjct 781479 AAGAGTGCGTCCATCTTCAAGTTGCTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGAGG 781420 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | ||||| || |||||| || | | | | ||||| | |||||| Sbjct 781419 GATTCCTTCCTTATCTTGGATTTTAGCCTTCACATTTTCAATGGTGTCAGATGGTTCCAC 781360 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | |||||||||||||| || | ||||| |||||||| ||||| Sbjct 781359 TTCCAATGTGATGGTTTTGCCAGTCAAAGTCTTAACAAAGATCTGCAT 781312 Score = 104 bits (114), Expect = 3e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||| | ||| | || ||||| | ||| ||||| || |||||||| || | Sbjct 379451 ACCACCTCTCAGACGAAGGACTAAATGGAGAGTGGATTCCTTCTGGATATTGTAGTCGGA 379392 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||||| || | || || || || ||||||||||| || || ||||||||||| | || Sbjct 379391 GAGAGTGCGACCATCTTCCAGTTGTTTACCAGCGAAGATCAGACGCTGCTGGTCTGGAGG 379332 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 42159 | || ||| |||||| ||| |||| | |||| || | | ||||| | |||| Sbjct 379331 GATGCCCTCTTTGTCC-TGAATTTTAGCCTTGACGTTCTCAATTGTGTCCGAAGGCTCCA 379273 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || | |||||||| || || || | ||||| ||||| |||||||| Sbjct 379272 CCTCCAGAGTGATGGTCTTTCCTGTCAATGTCTTCACAAATATTTGCAT 379224 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| ||||| || ||||| | || || || | || || ||||| |||||||| || Sbjct 377818 TCCTTCTGAATGTTATAATCGGAGAGGGTGCGACCATCTTCAAGCTGTTTACCAGCAAAG 377759 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || || ||||| ||||| | || | || ||| |||||| ||| |||||| || | ||| Sbjct 377758 ATAAGACGCTGTTGGTCTGGAGGAATGCCCTCTTTGTCC-TGAATTTTTGCTTTAACGTT 377700 Query 42138 GCCACC-GTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 || ||||| | || || || | ||||||||||| || || || ||||| || Sbjct 377699 TTCAATTGTGTCAGAAGGCTCTACTTCCAATGTGATGGTTTTACCAGTCAGGGTCTTGAC 377640 Query 42197 AAAGATTTGCATT 42209 ||| ||||||||| Sbjct 377639 AAAAATTTGCATT 377627 Score = 96.9 bits (106), Expect = 4e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||| ||||||| || ||||||||||| |||||||| ||||||||||||| Sbjct 781083 ACCACCTCTCAAACGCAGTACTAAATGCAATGTAGATTCCTTTTGGATATTGTAATCAGA 781024 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || ||| | || || | ||||| ||||| || || |||||||| ||||| | || Sbjct 781023 GAGTGTACGCCCATCTTCCAATTGCTTTCCAGCAAAGATAAGTCGCTGTTGGTCAGGAGG 780964 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 42159 | | ||||| | | ||| | || | || | | | | || || | ||| | Sbjct 780963 GATACCTTCCTTAT-CTTGAATCTTAGCCTTTACATTTTCAATGGTATCCGATGGTTCTA 780905 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 | || | ||| || |||||||| || | || || |||||||| |||||| Sbjct 780904 CTTCTAGCGTTATTGTTTTGCCAGTCAATGTTTTCACAAAGATCTGCATT 780855 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||| | ||| | || ||||| | ||| ||||| || ||||||||||| | Sbjct 379679 ACCACCTCTCAGACGAAGGACTAAATGGAGAGTGGATTCCTTCTGGATATTGTAATCGGA 379620 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||||| || | || || || || |||||||| || || || ||||||||||| | || Sbjct 379619 GAGAGTGCGACCATCTTCCAGTTGTTTACCAGCAAAGATCAGACGCTGCTGGTCTGGAGG 379560 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 42159 | | || |||||| ||| |||| | |||| || | | ||||| | ||| | Sbjct 379559 GATACCTTCTTTGTCC-TGAATTTTAGCCTTGACGTTCTCAATTGTGTCCGAAGGTTCGA 379501 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || | |||||||| || || || | ||||| ||||| |||||||| Sbjct 379500 CTTCCAAAGTGATGGTCTTCCCTGTCAATGTCTTCACAAATATTTGCAT 379452 Score = 95.1 bits (104), Expect = 1e-14 Identities = 167/241 (69%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 41969 ATTAATTTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAAT 42028 ||||||||| |||||| || || | ||| |||||||| | || ||| |||||||| Sbjct 782235 ATTAATTTAGAAACCTCCCCTCAATCTCAAGACCAAATGAAGAGTAGACTCTTTTTGAAT 782176 Query 42029 ATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTG 42088 |||||| |||| | || || | || |||||||| || || || || || | || || Sbjct 782175 ATTGTAGTCAGATAATGTGCGACCATCTTCTAGCTGTTTTCCTGCAAAAATCAATCTTTG 782116 Query 42089 CTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGT 42147 |||||| | || | || ||||| | | ||| |||| | || | || | | |||| Sbjct 782115 CTGGTCTGGGGGAATGCCTTCCTTAT-CTTGAATTTTAGCCTTCACATTCTCAATGGTGT 782057 Query 42148 CGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCA 42207 | | |||||| || | ||||| || ||||| |||| || || || || ||||||| Sbjct 782056 CTGATGGTTCCACTTCTAAAGTGATAGTCTTGCCAGTTAATGTTTTGACGAAAATTTGCA 781997 Query 42208 T 42208 | Sbjct 781996 T 781996 Score = 93.3 bits (102), Expect = 5e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || || | || ||| | ||||| || || || |||||| || || ||||| || | Sbjct 380134 CCGCCGCGTAGACGAAGTACCAAGTGTAAAGTAGACTCCTTCTGGATGTTGTAGTCTGAA 380075 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||| || | || ||||| || |||||||| || || || ||||||||||| | || Sbjct 380074 AGAGTGCGACCATCTTCTAGTTGTTTACCAGCAAAGATCAGACGCTGCTGGTCTGGAGGG 380015 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | || |||||| ||| |||| | |||| || | | ||||| | ||| || Sbjct 380014 ATACCTTCTTTGTCC-TGAATTTTAGCCTTGACGTTCTCAATTGTGTCCGAAGGTTCGAC 379956 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | |||||||| || || || | ||||| |||||||||||||| Sbjct 379955 TTCCAAAGTGATGGTCTTCCCTGTCAATGTCTTCACAAAGATTTGCAT 379908 Score = 91.5 bits (100), Expect = 2e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||| | ||| | || ||||| | ||| ||||| ||||||||||| || | Sbjct 378311 ACCACCTCTCAGACGAAGGACTAAATGGAGAGTGGATTCCTTCTGAATATTGTAGTCTGA 378252 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||||| || | || || || || ||||||||||| || || |||||||| || | || Sbjct 378251 GAGAGTGCGACCATCTTCCAGTTGTTTACCAGCGAAGATCAGACGCTGCTGATCTGGAGG 378192 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 42159 | | || |||| | ||| | || | |||| || | | ||||| | |||| Sbjct 378191 AATACCTTCTTTGT-CTTGAATCTTGGCCTTGACGTTCTCAATTGTGTCAGAGGGCTCCA 378133 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || | |||||||| || || || | ||||| |||||||||||||| Sbjct 378132 CCTCCAAAGTGATGGTCTTTCCTGTCAATGTCTTCACAAAGATTTGCAT 378084 Score = 91.5 bits (100), Expect = 2e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||| | ||| | || ||||| | ||| ||||| || |||||||| || | Sbjct 378767 ACCACCTCTCAGACGAAGGACTAAATGGAGAGTGGATTCCTTCTGGATATTGTAGTCCGA 378708 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||||| || | || || || || ||||||||||| || || ||||||||||| | || Sbjct 378707 GAGAGTGCGACCATCTTCCAGTTGTTTACCAGCGAAAATCAGACGCTGCTGGTCTGGAGG 378648 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 42159 | | || |||| | ||| | || | |||| || | | ||||| | ||| | Sbjct 378647 AATACCTTCTTTGT-CTTGAATCTTGGCCTTGACATTCTCAATTGTGTCCGAAGGTTCAA 378589 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || | |||||||| || || || | ||||||||||| |||||||| Sbjct 378588 CTTCCAAAGTGATGGTCTTCCCTGTCAATGTCTTTACAAATATTTGCAT 378540 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| ||||| || ||||| | || || || | || || ||||| |||||||| || Sbjct 379186 TCCTTCTGAATGTTATAATCGGAGAGGGTGCGACCATCTTCAAGCTGTTTACCAGCAAAG 379127 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGT 42136 || || ||||| ||||| | || | || ||| |||||| ||| | || | |||| | Sbjct 379126 ATAAGACGCTGTTGGTCTGGAGGAATGCCCTCTTTGTCC-TGAATCTTGGCCTTGACGTT 379068 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | ||||| | ||||| || | |||||||| || || || | |||||||| Sbjct 379067 CTCAATTGTGTCCGAGGGCTCCACCTCCAAAGTGATGGTCTTTCCTGTCAATGTCTTTAC 379008 Query 42197 AAAGATTTGCAT 42208 ||| |||||||| Sbjct 379007 AAATATTTGCAT 378996 >seq3313 Length=456339 Score = 104 bits (114), Expect = 3e-17 Identities = 75/87 (86%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 56993 TTATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGA 57052 |||||||||| ||||| |||| | |||||||||| ||||||||||||||||||||| Sbjct 363601 TTATGAAAAAAGTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGG 363542 Query 57053 CATACTCACCACTATACTACCGAGGAT 57079 ||||| |||||||||||||||| ||| Sbjct 363541 GATACTGACCACTATACTACCGAAGAT 363515 >seq786 Length=14941 Score = 96.9 bits (106), Expect = 4e-15 Identities = 73/86 (85%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 56995 ATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 57054 ||| |||| ||||| |||| | |||||||||| ||||||||||||||||||||| | Sbjct 2674 ATGTAAAAAGTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 2615 Query 57055 TACTCACCACTATACTACCGAGGATT 57080 |||| |||||||||||||||| |||| Sbjct 2614 TACTTACCACTATACTACCGAAGATT 2589 Score = 87.8 bits (96), Expect = 2e-12 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 57012 CGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 57071 |||| | |||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct 2363 CGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTA 2304 Query 57072 CCGAGGAT 57079 |||| ||| Sbjct 2303 CCGAAGAT 2296 >seq716 Length=203579 Score = 96.9 bits (106), Expect = 4e-15 Identities = 71/82 (87%), Gaps = 2/82 (2%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||||| ||||| ||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 127598 AAAAATTCTCTCC--GGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 127655 Query 57058 TCACCACTATACTACCGAGGAT 57079 | |||||||||||||||| ||| Sbjct 127656 TTACCACTATACTACCGAAGAT 127677 Score = 91.5 bits (100), Expect = 2e-13 Identities = 73/88 (83%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 56992 TTTATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGG 57051 ||||| |||| |||| |||| | |||||||||| ||||||||||||||||||||| Sbjct 121473 TTTATAAAAATAAATCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGG 121532 Query 57052 ACATACTCACCACTATACTACCGAGGAT 57079 ||||| |||||||||||||||| ||| Sbjct 121533 GGATACTTACCACTATACTACCGAAGAT 121560 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| |||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 124342 AAAAAGAATCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 124283 Query 57058 TCACCACTATACTACCGAGGAT 57079 | |||||||||||||||| ||| Sbjct 124282 TTACCACTATACTACCGAAGAT 124261 Score = 89.7 bits (98), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 |||| |||| | |||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 130443 TCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 130384 Query 57066 ATACTACCGAGGAT 57079 |||||||||| ||| Sbjct 130383 ATACTACCGAAGAT 130370 >seq3417 Length=240805 Score = 95.1 bits (104), Expect = 1e-14 Identities = 73/87 (84%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 56995 ATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 57054 || ||||| ||||| |||| | |||||||||| ||||||||||||||||||||| | Sbjct 92344 ATCAAAAAGGTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 92285 Query 57055 TACTCACCACTATACTACCGAGGATTG 57081 |||| |||||||||||||||| || || Sbjct 92284 TACTGACCACTATACTACCGAAGACTG 92258 >seq1289 Length=199168 Score = 95.1 bits (104), Expect = 1e-14 Identities = 72/84 (86%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 |||| |||| | |||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 173779 TCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 173720 Query 57066 ATACTACCGAGGAT-TGAATATAT 57088 |||||||||| ||| ||| ||||| Sbjct 173719 ATACTACCGAAGATGTGACTATAT 173696 Score = 91.5 bits (100), Expect = 2e-13 Identities = 71/85 (84%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 56995 ATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 57054 ||| |||| |||| |||| | |||||||||| ||||||||||||||||||||| | Sbjct 176585 ATGCAAAAGGATCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 176526 Query 57055 TACTCACCACTATACTACCGAGGAT 57079 |||| |||||||||||||||| ||| Sbjct 176525 TACTTACCACTATACTACCGAAGAT 176501 Score = 89.7 bits (98), Expect = 6e-13 Identities = 68/79 (86%), Gaps = 1/79 (1%) Strand=Plus/Minus Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064 ||||| |||| | |||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct 174381 TTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 174322 Query 57065 TATACTACCGAGGA-TTGA 57082 ||||||||||| || |||| Sbjct 174321 TATACTACCGAAGACTTGA 174303 Score = 89.7 bits (98), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 |||| |||| | |||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 175946 TCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 175887 Query 57066 ATACTACCGAGGAT 57079 |||||||||| ||| Sbjct 175886 ATACTACCGAAGAT 175873 >seq212 Length=476332 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| ||||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 158846 AAAAAAGTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 158787 Query 57058 TCACCACTATACTACCGAGGAT 57079 | |||||||||||||||| ||| Sbjct 158786 TTACCACTATACTACCGAAGAT 158765 >seq1183 Length=100153 Score = 91.5 bits (100), Expect = 2e-13 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 |||| ||||| |||| | |||||||||| ||||||||||||||||||||| ||||| Sbjct 19500 AAAAAGTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 19441 Query 57059 CACCACTATACTACCGAGGA 57078 |||||||||||||||| || Sbjct 19440 GACCACTATACTACCGAAGA 19421 >seq746 Length=41193 Score = 91.5 bits (100), Expect = 2e-13 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 57012 CGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 57071 |||| | |||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct 15072 CGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTA 15131 Query 57072 CCGAGGATTG 57081 |||| ||||| Sbjct 15132 CCGAAGATTG 15141 Score = 91.5 bits (100), Expect = 2e-13 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 57012 CGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 57071 |||| | |||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct 15318 CGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTA 15377 Query 57072 CCGAGGATTG 57081 |||| ||||| Sbjct 15378 CCGAAGATTG 15387 Score = 87.8 bits (96), Expect = 2e-12 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 57012 CGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 57071 |||| | |||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct 4098 CGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTA 4157 Query 57072 CCGAGGAT 57079 |||| ||| Sbjct 4158 CCGAAGAT 4165 Score = 86.0 bits (94), Expect = 7e-12 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 |||| |||| |||| | |||||||||| ||||||||||||||||||||| ||||| Sbjct 3800 AAAAAGTTCTTTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 3859 Query 57059 CACCACTATACTACCGAGGA 57078 |||||||||||||||| || Sbjct 3860 TACCACTATACTACCGAAGA 3879 >seq2713 Length=805872 Score = 89.7 bits (98), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064 ||||| |||| | |||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct 247096 TTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 247155 Query 57065 TATACTACCGAGGA 57078 ||||||||||| || Sbjct 247156 TATACTACCGAAGA 247169 >seq2627 Length=883029 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| |||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 154450 AAAAAAGATCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 154509 Query 57058 TCACCACTATACTACCGAGGAT 57079 | |||||||||||||||| ||| Sbjct 154510 TTACCACTATACTACCGAAGAT 154531 >seq1692 Length=382460 Score = 89.7 bits (98), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 |||| |||| | |||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 153482 TCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 153423 Query 57066 ATACTACCGAGGAT 57079 |||||||||| ||| Sbjct 153422 ATACTACCGAAGAT 153409 >seq332 Length=149734 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/81 (85%), Gaps = 2/81 (2%) Strand=Plus/Plus Query 57012 CGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 57071 |||| | |||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct 43626 CGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTA 43685 Query 57072 CCGAGGATTGAATATATAACT 57092 |||| ||| |||| ||||| Sbjct 43686 CCGAAGAT--GATATTTAACT 43704 Score = 87.8 bits (96), Expect = 2e-12 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 57012 CGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 57071 |||| | |||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct 43233 CGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTA 43292 Query 57072 CCGAGGAT 57079 |||| ||| Sbjct 43293 CCGAAGAT 43300 >seq100 Length=216933 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| |||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 122616 AAAAAAGATCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 122557 Query 57058 TCACCACTATACTACCGAGGAT 57079 | |||||||||||||||| ||| Sbjct 122556 TTACCACTATACTACCGAAGAT 122535 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| |||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 122867 AAAAAAGATCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 122926 Query 57058 TCACCACTATACTACCGAGGAT 57079 | |||||||||||||||| ||| Sbjct 122927 TTACCACTATACTACCGAAGAT 122948 >seq2115 Length=348658 Score = 87.8 bits (96), Expect = 2e-12 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 57012 CGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 57071 |||| | |||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct 127006 CGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTATACTA 126947 Query 57072 CCGAGGAT 57079 |||| ||| Sbjct 126946 CCGAAGAT 126939 >seq2618 Length=201275 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/196 (69%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||| || | ||||| || | || || | || ||||||||||| Sbjct 161666 TCCTTCTGGATGTTGTAGTCGGAAAGAGTACGGCCATCCTCCAATTGTTTACCAGCGAAG 161725 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || | ||||| ||||| | || | | |||||||| |||||| || | | Sbjct 161726 ATCAAACGCTGTTGGTCTGGAGGAATTCCTTCCTTGTCTTGGATTTTAGCCTTCACATTT 161785 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | |||||| | ||||| || | |||||||| || |||||||| || ||||| Sbjct 161786 TCGATAGTGTCGGAAGCCTCCACCTCAAGGGTGATGGTCTTACCCGTTAGGGTTTTTACG 161845 Query 42198 AAGATTTGCATTTTCA 42213 ||||| |||||||||| Sbjct 161846 AAGATCTGCATTTTCA 161861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543189143082560