Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoebis_20sennae_20[genbank_20GCA_5F001586405.1_202016-03-10] 3,484 sequences; 287,490,372 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq286 136 3e-27 seq2618 127 1e-24 >seq286 Length=933739 Score = 136 bits (150), Expect = 3e-27 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCT 15024 |||||||| ||||||||||| || ||||| ||||| |||||| ||| | || | ||| Sbjct 377611 AAAACTAAGTGAAGGGTAGATTCCTTTTGAATGTTATAATCGGAGAGGGTCCTTCCATCT 377552 Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084 || ||||| || || || | || | | || |||||| ||||| || || || || Sbjct 377551 TCCAATTGCTTTCCGGCAAAAATAAGCCTTTGCTGGTCGGGAGGAATACCCTCTTTATCT 377492 Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 |||||| ||||||| |||| ||||| || ||| || ||||| ||||||||| Sbjct 377491 TGAATTTTAGCTTTTACATTTTCGATAGTGTCAGACGGTTCAACCTCTAATGTAATGGTT 377432 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 ||||| || |||||||| |||||||| ||||| || Sbjct 377431 TTACCCGTAAGAGTTTTCACAAAAATCTGCATCTT 377397 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| || | | |||| ||| |||||||| || || || ||||| |||||| | Sbjct 377854 CCACCTCTCAGACGAAGGACTAGATGGAGGGTAGATTCCTTCTGAATGTTATAATCGGAG 377795 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | ||||| | ||||| ||||| | || | |||||||||||| ||| Sbjct 377794 AGGGTGCGACCATCTTCAAGCTGTTTACCAGCAAAGATAAGACGCTGTTGGTCTGGAGGA 377735 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || || ||||| |||||| ||| || |||| || || || | ||||| Sbjct 377734 ATGCCCTCTTTGTCCTGAATTTTTGCTTTAACGTTTTCAATTGTGTCAGAAGGCTCTACT 377675 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || ||||||||||| ||||| || || |||||||||||||| Sbjct 377674 TCCAATGTGATGGTTTTACCAGTCAGGGTCTTGACAAAAATTTGCAT 377628 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| ||| | | |||||||| | ||||| || ||||| || |||||||| | Sbjct 781082 CCACCTCTCAAACGCAGTACTAAATGCAATGTAGATTCCTTTTGGATATTGTAATCAGAG 781023 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | | ||||| ||||| || ||||| | || | ||||||||||| || Sbjct 781022 AGTGTACGCCCATCTTCCAATTGCTTTCCAGCAAAGATAAGTCGCTGTTGGTCAGGAGGG 780963 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTAT-TTTCTAC 15128 || |||||||| || ||| || |||||| |||| || ||||| | || |||||| Sbjct 780962 ATACCTTCCTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTATC-CGATGGTTCTAC 780904 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 |||| || || ||||| || |||| ||||| ||||| || ||||| Sbjct 780903 TTCTAGCGTTATTGTTTTGCCAGTCAATGTTTTCACAAAGATCTGCAT 780856 Score = 95.1 bits (104), Expect = 9e-15 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || || | |||||| || || |||||||| ||||| |||||||| || ||||| || | Sbjct 782222 CCTCCCCTCAATCTCAAGACCAAATGAAGAGTAGACTCTTTTTGAATATTGTAGTCA--G 782165 Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | ||| || | ||||||| ||||| || || | ||||| | || ||||| | Sbjct 782164 ATAATGTGCGACCATCTTCTAGCTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGGG 782105 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||| |||||||| || |||||| || ||| | || || || || ||| | Sbjct 782104 GAATGCCTTCCTTATCTTGAATTTTAGCCTTCACATTCTCAATGGTGTCTGATGGTTCCA 782045 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 | ||||| || || || || || || | ||||| || |||||||||||| Sbjct 782044 CTTCTAAAGTGATAGTCTTGCCAGTTAATGTTTTGACGAAAATTTGCATA 781995 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| || | | |||| ||| || ||||| || || || ||||| |||||| | Sbjct 379222 CCACCTCTCAGACGAAGGACTAGATGGAGAGTAGATTCCTTCTGAATGTTATAATCGGAG 379163 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | ||||| | ||||| ||||| | || | |||||||||||| ||| Sbjct 379162 AGGGTGCGACCATCTTCAAGCTGTTTACCAGCAAAGATAAGACGCTGTTGGTCTGGAGGA 379103 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || || ||||| ||| ||| || || | || || || || || || Sbjct 379102 ATGCCCTCTTTGTCCTGAATCTTGGCCTTGACGTTCTCAATTGTGTCCGAGGGCTCCACC 379043 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || ||||| || ||||||| || |||||||| ||||||||| Sbjct 379042 TCCAAAGTGATGGTCTTTCCTGTCAATGTCTTTACAAATATTTGCATA 378995 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| ||| | | || ||||| | ||||| ||||| || || || ||||| Sbjct 781538 CCACCTCTCAAACGCAGGACCAAATGCAATGTAGATTCTTTCTGGATATTATAATCAGAA 781479 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | | | ||||| | ||| || |||||| | || | | ||| ||||| || Sbjct 781478 AGAGTGCGTCCATCTTCAAGTTGCTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGAGGG 781419 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 ||||||||||| || ||||| || ||| |||| || || || ||| || Sbjct 781418 ATTCCTTCCTTATCTTGGATTTTAGCCTTCACATTTTCAATGGTGTCAGATGGTTCCACT 781359 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || |||||||| || |||| ||| || ||||| || |||||| Sbjct 781358 TCCAATGTGATGGTTTTGCCAGTCAAAGTCTTAACAAAGATCTGCATA 781311 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||| || | ||| |||||||| || || || ||||| || || || ||||| Sbjct 781766 CCTCCTCTCAGACGTAATACTAAATGCAGTGTCGACTCTTTCTGGATATTATAATCTGAT 781707 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | | | || || ||||| || || ||| | || | |||||| || || || Sbjct 781706 AGAGTACGTCCATCCTCCAATTGCTTTCCGGCGAAGATAAGACGCTGCTGATCAGGAGGG 781647 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||||||||| ||||| || ||| | || || || || ||| || Sbjct 781646 ATACCTTCCTTGTCTTGGATTTTAGCCTTCACATTCTCAATGGTGTCTGATGGTTCAACT 781587 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 ||||| || || || || || |||| ||| || |||||||| |||||| Sbjct 781586 TCTAAAGTGATTGTCTTGCCAGTCAAAGTCTTGACAAAAATCTGCATA 781539 >seq2618 Length=201275 Score = 127 bits (140), Expect = 1e-24 Identities = 158/215 (73%), Gaps = 1/215 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 ||||| || || || || || |||||||| ||| ||| | | | || || |||||| Sbjct 161654 TGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGGCCATCCTCCAATTGT 161713 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || |||||| | ||||||||||||||||| ||||||||||||||||| ||||| Sbjct 161714 TTACCAGCGAAGATCAAACGCTGTTGGTCTGGAGGAATTCCTTCCTTGTCTTGGATTTTA 161773 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| |||| ||||| ||| | || || || | ||| ||||| ||||| || Sbjct 161774 GCCTTCACATTTTCGATAGTGTCGGAAGCCTCCACCTCAAGGGTGATGGTCTTACCCGTT 161833 Query 15154 AGAGTTTTTACAAAAATTTGCATATTTGAAATAAA 15188 || |||||||| || || ||||| ||| || |||| Sbjct 161834 AGGGTTTTTACGAAGATCTGCAT-TTTCAACTAAA 161867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357376824688940