Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoebis_20sennae_20[genbank_20GCA_5F001586405.1_202016-03-10] 3,484 sequences; 287,490,372 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq209 136 5e-27 >seq209 Length=133430 Score = 136 bits (150), Expect = 5e-27 Identities = 480/733 (65%), Gaps = 24/733 (3%) Strand=Plus/Minus Query 105933 GATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGG 105992 |||| ||||| | || | |||||||| ||||||||||||| | |||||||| || | Sbjct 14653 GATAAATGTTTGAAGTAAATGGTTCAAATGATTCATTATTACCAAGAATTTGTGCAGTAG 14594 Query 105993 AGGCTGTTGGCATTGGTGCCATCA--AAAGACTGTTACGAAGACCCTTTTCCTTG--ATG 106048 | || || ||||| ||||| | | || || |||||||||||| || | ||| || Sbjct 14593 ATGCCGTGGGCATGGGTGCTAGTAGTAATGA--GTTACGAAGACCATTCT--TTGCAATT 14538 Query 106049 CGTTCCTTGAGAACATCCCAGTCGTAGT--TGAGCTTG-GTTTCACCTTCCCACATATCA 106105 |||||| |||||| |||||| | | | | | |||| | |||||||||||| Sbjct 14537 TTTTCCTTAAGAACAGACCAGTCCCACAAATCTGATGGTGTTTTA---TCCCACATATCA 14481 Query 106106 AATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCT 106165 |||| | | ||||| | ||| || ||| | || ||| || | Sbjct 14480 TATTGTAAAATTCCTTGACTGGCTGGACTTCCTTCATAAGTGCTATATACTCCATCTTTC 14421 Query 106166 TCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCA 106225 || || | ||||| ||| || |||| || | | || || |||||||| || | Sbjct 14420 TCTGCAAGTTCACTGCTTGCTTCCAAGGCGCCATAGTATATTGTTTCAAATATTTGTTGG 14361 Query 106226 TTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCAC-AAAATAAATACATCCGC 106284 |||| || | |||| || ||| ||| | | ||| |||| ||| || || Sbjct 14360 TTCAACTTGATAGCTTTCTCACTTTCATATG-GAATACGCATTAAAACAAAGGTGTCGGC 14302 Query 106285 GAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC 106344 ||||||||||| || | || || || || || | | ||| || ||| || ||| Sbjct 14301 TAGACCTTGAACTCCAATTCCTATGGGCCTATGCCTAAGATTTGAGTTTTTAGCT-TCTG 14243 Query 106345 -AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 106403 ||| || ||||| || ||||| | | ||| ||||||| || | || || || | Sbjct 14242 GAACTGGGTAAAAGTTGACATCAATTATTTTGTTAAGATTTTGTGTTATTATTTTGGTCA 14183 Query 106404 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGG 106463 ||| | | |||||| ||| ||||| | |||||||| ||| || | || | Sbjct 14182 CTTCTTTTAACTTTTCAAAATTGAAAGTTTTA---TCTTCATTAACAAACATGTTTAGTG 14126 Query 106464 CGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATC-TGTGTACTCTAAAATTTCT 106522 | ||||| |||||||| || || || ||||| | || ||||||||||| |||||| Sbjct 14125 CTATTGAAGCCAAATTACAGACTGCAACTTCATC-TGATGATGTGTACTCTACAATTTCA 14067 Query 106523 GTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCAC 106582 ||||| | ||| | || || || || | ||| ||||| || || ||| | ||||| Sbjct 14066 GTACAGAGATTGCTGCATTTTATTGTGCCAAGATTTTTTTGATTGCTTTTTCTATTGCAG 14007 Query 106583 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTC 106642 | ||||| || | |||||| || || || |||||| || | | | |||||| ||| Sbjct 14006 GAGTCCTTATATAACATGTACGGTGTTCCAGTCTCCACTTGAGCTTCTACAATTGCTTTC 13947 Query 106643 CA-CACATCGGCG 106654 || ||||| ||| Sbjct 13946 CATAACATCTGCG 13934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589955106336160