Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoebis_20sennae_20[genbank_20GCA_5F001586405.1_202016-03-10] 3,484 sequences; 287,490,372 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq286 111 1e-19 seq1176 84.2 1e-11 >seq286 Length=933739 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 |||||| ||||||| || ||| || ||||||||||| || || ||| | | | |||| Sbjct 377612 CAAAACTAAGTGAAGGGTAGATTCCTTTTGAATGTTATAATCGGAGAGGGTCCTTCCATC 377553 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 |||| || ||||||||||| || || | ||||||||| | || | ||||| || || Sbjct 377552 TTCCAATTGCTTTCCGGCAAAAATAAGCCTTTGCTGGTCGGGAGGAATACCCTCTTTATC 377493 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 ||| || ||| || | | || | ||| | ||||| || | || ||||| Sbjct 377492 TTGAATTTTAGCTTTTACATTTTCGATAGTGTCAGACGGTTCAACCTCTAATGTAATGGT 377433 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 ||| ||||| ||||| |||||||| |||||||| || Sbjct 377432 TTTACCCGTAAGAGTTTTCACAAAAATCTGCATCTT 377397 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| |||||||||||||| || || ||| | || |||| || |||||||| || ||||| Sbjct 377819 TTCCTTCTGAATGTTATAATCGGAGAGGGTGCGACCATCTTCAAGCTGTTTACCAGCAAA 377760 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || || |||||| | || | ||||| ||||| ||| || ||| ||| Sbjct 377759 GATAAGACGCTGTTGGTCTGGAGGAATGCCCTCTTTGTCCTGAATTTTTGCTTTAACGTT 377700 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | | || | ||| | ||| || || | || |||||||| || || || ||||| || Sbjct 377699 TTCAATTGTGTCAGAAGGCTCTACTTCCAATGTGATGGTTTTACCAGTCAGGGTCTTGAC 377640 Query 34970 AAAGATCTGCAT 34981 ||| || ||||| Sbjct 377639 AAAAATTTGCAT 377628 Score = 96.9 bits (106), Expect = 2e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| |||||||||||||| || || ||| | || |||| || |||||||| || ||||| Sbjct 379187 TTCCTTCTGAATGTTATAATCGGAGAGGGTGCGACCATCTTCAAGCTGTTTACCAGCAAA 379128 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || || |||||| | || | ||||| ||||| |||||| |||||| Sbjct 379127 GATAAGACGCTGTTGGTCTGGAGGAATGCCCTCTTTGTCCTGAATCTTGGCCTTGACGTT 379068 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | || | || || ||| || || | || ||||| ||||| || | ||||| || Sbjct 379067 CTCAATTGTGTCCGAGGGCTCCACCTCCAAAGTGATGGTCTTTCCTGTCAATGTCTTTAC 379008 Query 34970 AAAGATCTGCATA 34982 ||| || |||||| Sbjct 379007 AAATATTTGCATA 378995 Score = 95.1 bits (104), Expect = 8e-15 Identities = 139/195 (71%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||| ||||| |||||||| ||| | || |||| || ||||| ||||| ||||| Sbjct 378503 TTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCATCTTCAAGCTGCTTTCCTGCAAA 378444 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || |||| || ||||| | || | ||||| ||||| |||||| |||||| | Sbjct 378443 GATCAGTCTCTGTTGGTCAGGGGGGATACCCTCTTTGTCCTGAATCTTGGCTTTGAC--A 378386 Query 34910 TGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTC 34967 | || || | || || ||| || || | || ||||| || || || | |||||| Sbjct 378385 TTCTCAATTGTGTCCGAGGGCTCCACCTCCAAAGTGATGGTCTTCCCTGTCAATGTCTTC 378326 Query 34968 ACAAAGATCTGCATA 34982 ||||| || |||||| Sbjct 378325 ACAAATATTTGCATA 378311 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| |||||||| || ||||| || || | || |||| ||||| ||||| || || || Sbjct 378275 TTCCTTCTGAATATTGTAGTCTGAGAGAGTGCGACCATCTTCCAGTTGTTTACCAGCGAA 378216 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || ||||| ||| | || | || || ||||| |||||| |||||| Sbjct 378215 GATCAGACGCTGCTGATCTGGAGGAATACCTTCTTTGTCTTGAATCTTGGCCTTGACGTT 378156 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | || | ||| || ||| || || | || ||||| ||||| || | |||||||| Sbjct 378155 CTCAATTGTGTCAGAGGGCTCCACCTCCAAAGTGATGGTCTTTCCTGTCAATGTCTTCAC 378096 Query 34970 AAAGATCTGCATA 34982 |||||| |||||| Sbjct 378095 AAAGATTTGCATA 378083 Score = 89.7 bits (98), Expect = 3e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||||||||| ||||| ||||| |||| || ||||| ||||| || ||||| || Sbjct 782222 CCTCCCCTCAATCTCAAGACCAAATGAAGAGTAGACTCTTTTTGAATATTGTAGTCAGAT 782163 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 | | || |||| || ||||||||||| ||||| || | || |||||||||| | || Sbjct 782162 AATGTGCGACCATCTTCTAGCTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGGGGA 782103 Query 34875 ACCCCCTCCTTGTC 34888 | || ||||| || Sbjct 782102 ATGCCTTCCTTATC 782089 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/195 (70%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||| ||||| |||||||| ||| | || |||| || ||||| ||||| ||||| Sbjct 378047 TTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCATCTTCAAGCTGCTTTCCTGCAAA 377988 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || |||| || ||||| | || | || || ||||| ||| || |||||| | Sbjct 377987 GATCAGTCTCTGTTGGTCAGGGGGGATGCCTTCTTTGTCCTGAATTTTAGCTTTGAC--A 377930 Query 34910 TGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTC 34967 | || || | || | ||| || || | || ||||| ||||| || | |||||| Sbjct 377929 TTCTCAATTGTGTCCGAAGGCTCCACCTCCAGAGTGATGGTCTTTCCTGTCAATGTCTTC 377870 Query 34968 ACAAAGATCTGCATA 34982 ||||| || |||||| Sbjct 377869 ACAAATATTTGCATA 377855 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/195 (70%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||| ||||| |||||||| ||| | || |||| || || || ||||| ||||| Sbjct 378959 TTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCATCTTCAAGTTGCTTTCCTGCAAA 378900 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || |||| || ||||| | || | || || ||||| |||||| ||||| | Sbjct 378899 GATCAGTCTCTGTTGGTCAGGGGGGATGCCTTCTTTGTCCTGAATCTTGGCCTTGAC--A 378842 Query 34910 TGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTC 34967 | || || | || || ||| || || | || ||||| || || || | |||||| Sbjct 378841 TTCTCAATTGTGTCCGAGGGCTCCACCTCCAAAGTGATGGTCTTCCCTGTCAATGTCTTC 378782 Query 34968 ACAAAGATCTGCATA 34982 ||||| ||||||||| Sbjct 378781 ACAAATATCTGCATA 378767 Score = 82.4 bits (90), Expect = 5e-11 Identities = 134/193 (69%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||| ||||| |||||||| ||| | || |||| || ||||| ||||| ||||| Sbjct 379871 TTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCATCTTCAAGCTGCTTTCCTGCAAA 379812 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || |||| || ||||| | || | || || ||||| ||| || |||||| Sbjct 379811 GATCAGTCTCTGTTGGTCAGGGGGGATGCCTTCTTTGTCCTGAATTTTAGCCTTGACGTT 379752 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | || | || || ||| || || | || ||||| || || || | |||||||| Sbjct 379751 CTCAATTGTGTCCGAGGGCTCCACCTCCAAAGTGATGGTCTTCCCTGTCAATGTCTTCAC 379692 Query 34970 AAAGATCTGCATA 34982 ||| || |||||| Sbjct 379691 AAATATTTGCATA 379679 >seq1176 Length=404280 Score = 84.2 bits (92), Expect = 1e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||||| ||| ||||| ||||| |||| || ||||| ||||| || ||||| || Sbjct 385201 CCTCCCCACAATCTCAAGACCAAATGAAGAGTAGACTCTTTTTGAATATTGTAGTCAGAT 385142 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 | | || |||| || ||||||||||| ||||| || | || |||||||||| | || Sbjct 385141 AATGTGCGACCATCTTCTAGCTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTAGGGGA 385082 Query 34875 ACCCCCTCCTTGTC 34888 | || ||||| || Sbjct 385081 ATGCCTTCCTTATC 385068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324619815651552