Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoebis_20sennae_20[genbank_20GCA_5F001586405.1_202016-03-10] 3,484 sequences; 287,490,372 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq209 174 2e-38 >seq209 Length=133430 Score = 174 bits (192), Expect = 2e-38 Identities = 892/1395 (64%), Gaps = 38/1395 (3%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 |||||| | ||| | ||| | || ||||| || || || || ||||| ||||| ||| | Sbjct 13276 CCACAGCATATGCTTATGAGAGTTGCAATTGGAATACATGGTGAAGATGTTGATGCTGCC 13335 Query 75272 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 75331 | | |||||| || | | || || || | || |||| ||||| || ||| Sbjct 13336 ATCAATACATACAACTTGTTATCTGAAAAATACTTTACACATGCAAGTCCAACACTTTTC 13395 Query 75332 AATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 75391 ||||| ||| || || || ||| | || ||| ||| | || || | || || ||| Sbjct 13396 TCTGCTGCTACTCCGAGGCCACAGCTTTCTTCTTGTTTCTTAATAGCTATGAAAGACGAC 13455 Query 75392 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 75451 || | || || |||| ||||||| | ||||| || ||||| | ||||| Sbjct 13456 AGTATTGAAGGAATATATGATACTCTTAAACAATGTGCAATGATTTCAAAATCAGCTGGT 13515 Query 75452 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAAT 75511 ||||| || | || | ||| | | || || || || || || |||||| Sbjct 13516 GGTATAGGTCTACATGTACATTGTATAAGGGCTAAAGGGTCCTACATAGCTGGAACAAAT 13575 Query 75512 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 75571 || || |||| | | |||||| | | |||| |||| |||||| | |||||| Sbjct 13576 GGAGTTTCTAATGGATTGGTACCAATGTTAAGAGTATATAACAACACAGCTAGATATGTA 13635 Query 75572 AATCAAGCGGGGCGTCGCAAGG---GGTCCATC-GCGGTCTACTTGGAACCATGGCATGC 75627 |||||| | ||| || ||| ||| || | |||||||||||||||||||| Sbjct 13636 GATCAAG-GCGGCAATAAGAGACCTGGTGCATTTGCTATTTACTTGGAACCATGGCATGC 13694 Query 75628 CGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTA- 75686 ||||| | || ||| | || | | || ||| | ||||| | || ||| | Sbjct 13695 AGATATTTTTGAATTCTTAGATCTCAAAAAAAATACAGGGAAAGAAGAAG-TCCGTGCAA 13753 Query 75687 GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTG 75746 |||| | |||| | || ||||| ||||| | || ||||| ||||||| | | Sbjct 13754 GAGAGTTGTTTTATGCTCTTTGGATACCAGATTTATTTATGAAAAGGGTTGAAAAAAACG 13813 Query 75747 GTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGG 75806 | ||| | || | ||||| | | || || || || || ||| || | Sbjct 13814 AAAATTGGAGTATTATGTGTCCCCATGATTGCCCTGGCCTTTCAGATTGTTGGGGAGAAG 13873 Query 75807 AGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGA---GCCAATGCGACTGTAC 75863 |||||||| || || ||| |||||| | || | | || || | ||| Sbjct 13874 AGTTTGAAAAGCTATATGAAAAATATGAACAAGAAAAAAAGTTTGTTAA-GCAA--GTAA 13930 Query 75864 CAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATAT 75922 ||| || |||||| ||||| || ||| | || | || ||||||||||||||| || Sbjct 13931 AAGC-GCAGATGTTATGGAAAGCAATTGTAGAAGCTCAAGTGGAGACTGGAACACCGTAC 13989 Query 75923 ATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAG 75982 ||| | || ||||| | || || | || || || ||||| ||| | || ||||| || Sbjct 13990 ATGTTATATAAGGACTCCTGCAATAGAAAAAGCAATCAAAAAAATCTTGGCACAATAAAA 14049 Query 75983 AGCTCAAATCTTTGCACGGAAATTTTAGAGTACACA-GATAAGGATGAGACGGCTGTTTG 76041 || ||||| || || |||||| ||||||||||| || | ||||| || || || Sbjct 14050 TGCAGCAATCTCTGTACTGAAATTGTAGAGTACACATCATCA-GATGAAGTTGCAGTCTG 14108 Query 76042 CAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTA 76101 |||||||| ||||| || || | || ||| |||||||| | ||||| ||| Sbjct 14109 TAATTTGGCTTCAATAGCACTAAACATGTTTGTTAATGAAGA---TAAAACTTTCAATTT 14165 Query 76102 TGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAG 76161 |||||| | | ||| | || || || | || ||||||| ||| | | ||||| Sbjct 14166 TGAAAAGTTAAAAGAAGTGACCAAAATAATAACACAAAATCTTAACAAAATAATTGATGT 14225 Query 76162 AAATTTTTATCCCGTT-GAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTT 76220 || ||||| || ||| ||| || ||| || ||| | | || || || || || Sbjct 14226 CAACTTTTACCCAGTTCCAGA-AGCTAAAAACTCAAATCTTAGGCATAGGCCCATAGGAA 14284 Query 76221 TGGGTGTTCAAGGTCTCGCGGATGTATTTATTTT-GTGCCGCTACGCATTTGATTCAGAT 76279 | || ||||||||||| || || ||| |||| ||| | | ||| ||| || Sbjct 14285 TTGGAGTTCAAGGTCTAGCCGACACCTTTGTTTTAATGCGTATTC-CATATGAAAGTGAG 14343 Query 76280 GAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCG 76339 |||| | || |||| | || |||||||| || || | | || |||| || Sbjct 14344 AAAGCTATCAAGTTGAACCAACAAATATTTGAAACAATATACTATGGCGCCTTGGAAGCA 14403 Query 76340 AGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCC 76399 || ||||| | || || | || ||| || | ||| || ||| || Sbjct 14404 AGCAGTGAACTTGCAGAGAAAGATGGAGTATATAGCACTTATGAAGGAAGTCCAGCCAGT 14463 Query 76400 CAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAAC-CAAGCTCA--ACTACGACTGG 76456 ||||| | | || | |||||||||||| | |||| | | | | | |||||| Sbjct 14464 CAAGGAATTTTACAATATGATATGTGGGA---TAAAACACCATCAGATTTGTGGGACTGG 14520 Query 76457 GATGTTCTCAAGGAACGCAT--CAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGGC 76512 |||||| |||||| || ||| |||| |||||||||||| || || | | || Sbjct 14521 TCTGTTCTTAAGGAAAAAATTGCAA--AGAATGGTCTTCGTAAC--TCATTACTACTAGC 14576 Query 76513 ACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATA 76572 ||| ||||| || || || || |||||||| | ||||||||||||| |||||||||| Sbjct 14577 ACCCATGCCCACGGCATCTACTGCACAAATTCTTGGTAATAATGAATCATTTGAACCATT 14636 Query 76573 CACAACAAACATCTA 76587 || ||||||| || Sbjct 14637 TACTTCAAACATTTA 14651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596543619393920