Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoebis_20sennae_20[genbank_20GCA_5F001586405.1_202016-03-10] 3,484 sequences; 287,490,372 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq995 89.7 8e-12 seq440 87.8 3e-11 seq650 86.0 1e-10 seq527 86.0 1e-10 >seq995 Length=359585 Score = 89.7 bits (98), Expect = 8e-12 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 794019 AGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATG 794078 |||||||| ||||| ||||| || ||||||| | |||||||| || ||||||||||| Sbjct 121703 AGCAGGCGATCGGCCACGAACTCGATGTACTCGGACATGAGGTCGCAGTTCATGCCGAGC 121762 Query 794079 AGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATG 794138 || ||||||||||| || | | ||||| | |||||| ||||||||| |||| Sbjct 121763 AGGCGCACGGGCAGCGCGTCCGTCAGGAACTCCTGCTCGATGAGCACGGCCTCGCGGATG 121822 Query 794139 AT 794140 || Sbjct 121823 AT 121824 >seq440 Length=229593 Score = 87.8 bits (96), Expect = 3e-11 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 1812784 GCCTCGGTGGCGCAGTTGGCGGCGCGCCAATCCCATAAATTGGAGGTCGTGAGTTCGATC 1812843 |||||||||||||||| ||| ||||| | || ||||| | ||||||||||||||||| Sbjct 163634 GCCTCGGTGGCGCAGTAGGCAGCGCGTAAGTCTCATAATCTTAAGGTCGTGAGTTCGATC 163693 Query 1812844 CTCACCCGAGGTATATCA 1812861 |||||||| || |||||| Sbjct 163694 CTCACCCGGGGCATATCA 163711 >seq650 Length=236279 Score = 86.0 bits (94), Expect = 1e-10 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 1812784 GCCTCGGTGGCGCAGTTGGCGGCGCGCCAATCCCATAAATTGGAGGTCGTGAGTTCGATC 1812843 |||||||||||||||| ||| ||||| | || ||||| | ||||||||||||||||| Sbjct 210780 GCCTCGGTGGCGCAGTAGGCAGCGCGTAAGTCTCATAATCTTAAGGTCGTGAGTTCGATC 210721 Query 1812844 CTCACCCGAGGTATATC 1812860 |||||||| || ||||| Sbjct 210720 CTCACCCGGGGCATATC 210704 >seq527 Length=131417 Score = 86.0 bits (94), Expect = 1e-10 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 1812784 GCCTCGGTGGCGCAGTTGGCGGCGCGCCAATCCCATAAATTGGAGGTCGTGAGTTCGATC 1812843 |||||||||||||||| ||| ||||| | || ||||| | ||||||||||||||||| Sbjct 10061 GCCTCGGTGGCGCAGTAGGCAGCGCGTAAGTCTCATAATCTTAAGGTCGTGAGTTCGATC 10002 Query 1812844 CTCACCCGAGGTATATC 1812860 |||||||| || ||||| Sbjct 10001 CTCACCCGGGGCATATC 9985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915875791029476