Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoebis_20sennae_20[genbank_20GCA_5F001586405.1_202016-03-10] 3,484 sequences; 287,490,372 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq2763 190 2e-43 seq3433 188 6e-43 seq170 107 2e-18 >seq2763 Length=379199 Score = 190 bits (210), Expect = 2e-43 Identities = 352/511 (69%), Gaps = 13/511 (3%) Strand=Plus/Minus Query 103568 AACGGGTTCTTCTACTTGGGCCGCGGCGACGAAGTGCGCTGCGCGTTTTGCAAAGTGGAG 103627 || || || | ||| | || || || ||||||||||| ||||| ||||| || |||||| Sbjct 320160 AATGGATTTTACTATCTCGGTCGTGGGGACGAAGTGCGTTGCGCCTTTTGTAAGGTGGAG 320101 Query 103628 ATTATGCGCTGGGAGGAGGGCGACGACCCGGCTCGCGATCATCAGAGGTGGGCGCCGCAG 103687 || ||| | ||||| || ||||||||||| ||| |||||||| | ||||| ||||| Sbjct 320100 ATAATGAGATGGGACGAAGGCGACGACCCAGCTAAAGATCATCAACGATGGGCACCGCAA 320041 Query 103688 TGTCCGTTCCTGaaaa---aaaCGGCTGCTGGCGCGCTGCCCGCCG--GC-CTTGCGATG 103741 ||||| || |||| | || ||| || ||| ||||| | || | | || Sbjct 320040 TGTCCTTTTCTGAGACGTCAAGCGGGAGCCGGCAATGTGCCCTTAGATGCTCAGGTGACT 319981 Query 103742 GACGGGCAGGACGAGTGCGGCGTGAGCGCGCTGCCGTCCACCAACGCCTGCGTGCGCATG 103801 | ||| | || |||||||| ||| | || | || | |||| | | || ||| Sbjct 319980 GTCGGTCGAGATGAGTGCGGTGTGCGGGCACCACCCACAACCACCCCG---GTTAAAATG 319924 Query 103802 CCCGGCCCCGCGCACCCTCGGTTCGCCTCCGAGGCCTCAAGGTTACAAACTTTTAAGGAT 103861 ||||| |||| || | || | |||||| ||||| | | ||| |||||| ||| Sbjct 319923 CCCGGGCCCGTACATTCGCGATACGCCTCAGAGGCGGCTCGCCTACGGACTTTTGCCGAT 319864 Query 103862 TGGCCCCGGAGTCTGAAACAGAAACCGGAGAAGA--TGGCCGAAGCCGGATTCTACTACA 103919 |||||||| ||| || || ||||| |||||| |||| ||||| || |||| |||| Sbjct 319863 TGGCCCCGAAGTATGCGTCAAAAACC--AGAAGAACTGGCGGAAGCGGGTTTCTTTTACA 319806 Query 103920 CCGGCCACAGCGACAACACGAAATGCTTCTACTGCGACGGTGGTCTAAAGGATTGGGAGC 103979 | || || |||| || || ||||| |||| |||||| || || |||| || ||||| Sbjct 319805 CGGGACAGGGCGATAAAACTAAATGTTTCTTCTGCGATGGCGGCTTAAAAGACTGGGAAA 319746 Query 103980 ACGATGATGAGCCGTGGCAACAACACGCGCTTTTCTTTCGCCGTTGCGCATACGTGCTAC 104039 | ||||| | || ||| |||| ||||||| || ||| || ||||| || || | | Sbjct 319745 ATGATGACGTACCTTGGGAACAGCACGCGCGTTGGTTTTCGCGATGCGCTTATGTTCAGC 319686 Query 104040 TTGTCAAGGGCCACGATTATGTACAAAAGGT 104070 | || || || | || || || || ||||| Sbjct 319685 TAGTGAAAGGTCGTGAATACGTTCAGAAGGT 319655 >seq3433 Length=253125 Score = 188 bits (208), Expect = 6e-43 Identities = 576/883 (65%), Gaps = 13/883 (1%) Strand=Plus/Plus Query 29067 GTCGCTGCGTATTTTGTAGAATGGGGCGTATATGGCCGCAACTTTCCGGTAGACAAAGTG 29126 |||| ||||| ||||| ||||||||||| || || || | ||| || || || Sbjct 145753 GTCGGCGCGTACTTTGTCGAATGGGGCGTGTACCCGCGAAAGTATCCAGTCGATCGTGTC 145812 Query 29127 CCGCTGCCCAACCTCTCGCATCTGTTGTACGGTTTCATACCTATTTGCGGCGGCGACGGG 29186 || | || || | | |||||| | || || ||||| || || || || || || || Sbjct 145813 CCCATTCCTAATTTAACTCATCTGCTATATGGCTTCATCCCGATCTGTGGTGGTGATGGC 145872 Query 29187 CTCAACGACGCCCTCAAAACCATTCCCGGCAGTTTTGAGGCGCTGCAACGCTCTTGCAAG 29246 |||| ||| | || || || ||||| | ||| |||||||||| ||| Sbjct 145873 ATCAATGACAGTTTGAAGGAAATCGAAGGTAGTTTCCAAGCGTTGCAACGCTCATGCTCT 145932 Query 29247 GGCCGTTCAGATTTCAAAGTCGCTATTCACGATCCGTGGGCCGCGATACAAAAACCGCAA 29306 || || ||| || | || | ||||| ||||| |||||||| | || || || || Sbjct 145933 GGGCGCGAAGACTTTACGGTGTCGATTCATGATCCCTGGGCCGCTTTGCAGAAGCCACAG 145992 Query 29307 AAGGGCGTGTCTGCGTGGAACGAGCCCTACAAAGGAAACTTCGGTCAGCTAATGGCGGCC 29366 || || | ||| | ||||| || || |||||||| || ||||| || | |||||| Sbjct 145993 AAAGGACTCTCTTCCTGGAATGAACCTTACAAAGGCAATTTCGGCCAATTGATGGCGTTG 146052 Query 29367 AAGCTGGCCAATCCGCACCTCAAAATTCTGCCGTCCATCGGCGGCTGGACATTGTCCGAC 29426 || | |||| || | | || ||||| || || || || |||||||| | | || Sbjct 146053 AAACAAGCCAGGCCTGATTTGAAGATTCTCCCATCTATTGGTGGCTGGACCCTCGCAGAT 146112 Query 29427 CCGTTCTATTTCATGCACGACGCGGAAAA---ACGGCGTGTGTTTGTGGACTCGGTCAGA 29483 || |||| ||| | | ||| | | || || ||| || || | || | | Sbjct 146113 CCTTTCTTCTTCTTCGATGACCCAGTTAAGAGACACCGT---TTCGTCGCTTCAGCGAAG 146169 Query 29484 GAATTTCTGCAGGTGTGGAAGTTTTTTGACGGCGTGGACATAGACTGGGAGTTTCCGGGT 29543 || || || | ||||| | |||||||| | ||||| ||||||||||| || || Sbjct 146170 GAGTTCCTTCTAACCTGGAAAATGTTTGACGGTCTCGACATCGACTGGGAGTTCCCCGGA 146229 Query 29544 GGCAAAGGCGCCAACCCGACACTTGGCAACGGGGAGCGCGACGCCGACACGTATAACATT 29603 |||||||| || ||| || ||| |||| | | | |||| || || || ||| Sbjct 146230 GGCAAAGGAGCTAACGAGAAACTCGGCAGCCCGAAA---GACGGTGAAACTTACGTCATA 146286 Query 29604 TTACTAAAGGAATTGCGCGCAATGATGGACGAGTTACAATTGCAAACGGGCAAAACGTAC 29663 || | || || |||||| |||| | |||| ||| | ||||||||||| | ||| Sbjct 146287 TTGATGAAAGAGCTGCGCGAAATGTTAAACGAATTATCTCTTCAAACGGGCAAGAAATAC 146346 Query 29664 GAGTTGACAAGCGCAATCAGTTCCGGACATGACAAGATTGCTGTAGTTAAATACGACGCT 29723 || | ||| || |||||| |||| ||||||||| ||| | | ||| | ||| Sbjct 146347 GAACTCACATCAGCTATCAGTGCCGGCTGGGACAAGATTCAAGTAATCGACTACAAAGCT 146406 Query 29724 GCGCAAAAGTTTCTCGATAAAATATTCCTCATGAGCTACGATTTTAAAGGCGCGTGGTCA 29783 || ||||| | | || | |||||||||||||| ||||| || || || || ||||| Sbjct 146407 GCCCAAAACTACATGGACCACATATTCCTCATGAGTTACGACTTCAAGGGTGCCTGGTCC 146466 Query 29784 AACACCGATTTGGGCTACCAAACTACTCTCTACGCGCC-GAGTTGGAACCCAAACGAACT 29842 || ||| || | || ||| | | || || || ||| ||||| || || ||| Sbjct 146467 AATGATACTTTAGGACATCAGACTTCATTATATGCACCTGAG-TGGAATCCGAAGGAAAC 146525 Query 29843 GTACAACACGGACCACGCCGTTAAGTTGCTCACGAAC-CAGGGCGTGGACCCGCGCAAAA 29901 ||||| || ||| || || || | || | | || || || |||| || | Sbjct 146526 GTACACAACTGACTTCGGTGTACAG-TACTTGTTAGCTCAAGGTGTCAACCCTAAGAAGA 146584 Query 29902 TTATTGTGGGCGTCGCCATGTACGGCCGCGGTTGGACAGGCGT 29944 || | || |||||||| ||||| ||||| || ||||| || || Sbjct 146585 TTGTAGTAGGCGTCGCTATGTATGGCCGTGGGTGGACCGGAGT 146627 >seq170 Length=994537 Score = 107 bits (118), Expect = 2e-18 Identities = 103/132 (78%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 105086 GCACGGCTTTCACGTTCACGAGTTCGGCGATACCAGCAACGGCTGCACGTCCGCCGGCGA 105145 ||| || || ||||| |||||||||||||| | || ||||||||||||||||| ||| Sbjct 674290 GCATGGTTTCCACGTGCACGAGTTCGGCGACAACACGAACGGCTGCACGTCCGCGGGCCC 674231 Query 105146 GCACTTCAACCCTACGCGCCAAAATCACGGCGCTCCAGACGCCGCAGAAAGGCACGTCGG 105205 |||||||||||| ||| || | |||||||| || |||| | |||||||| || Sbjct 674230 GCACTTCAACCCCACGAAGCAGGAGCACGGCGCCCCCAGCGCCAGCGTGAGGCACGTGGG 674171 Query 105206 CGACCTGGGCAA 105217 |||||| ||||| Sbjct 674170 CGACCTCGGCAA 674159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398859863192476