Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoebis_20sennae_20[genbank_20GCA_5F001586405.1_202016-03-10] 3,484 sequences; 287,490,372 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq286 149 1e-30 seq1176 109 9e-19 >seq286 Length=933739 Score = 149 bits (164), Expect = 1e-30 Identities = 176/236 (75%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 ||||||| ||| | ||||||||||| || || || || ||| | || || ||| ||| | Sbjct 781997 TGCAAATTTTCGTCAAAACATTAACTGGCAAGACTATCACTTTAGAAGTGGAACCATCA- 782055 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || ||| | ||||| || |||||| ||| ||| ||||||||||| || || || Sbjct 782056 GACACCATTGAGAATGTGAAGGCTAAAATTCAAGATAAGGAAGGCATTCCCCCAGACCAG 782115 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 |||||| | ||||||||||| ||||| |||| ||| | | || ||| | || || ||| Sbjct 782116 CAAAGATTGATTTTTGCAGGAAAACAGCTAGAAGATGGTCGCACATTATCTGACTACAAT 782175 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAAT 146266 || |||||||| || ||| | ||||| || || |||| || |||||| ||||| Sbjct 782176 ATTCAAAAAGAGTCTACTCTTCATTTGGTCTTGAGATTGAGGGGAGGTTTCTAAAT 782231 Score = 145 bits (160), Expect = 1e-29 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 ||||||| ||| | ||||||||||| || || || |||||| | || || ||| ||| | Sbjct 781769 TGCAAATTTTCGTCAAAACATTAACTGGCAAGACTATTACTTTAGAAGTGGAACCATCA- 781827 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||| ||| | ||||| || |||||| ||| ||| ||||| || || || ||||| Sbjct 781828 GATACCATTGAGAATGTGAAGGCTAAAATCCAAGATAAGGAAGGTATCCCTCCTGATCAG 781887 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 || | || || || || || || ||||| || ||| | || || ||||||||||| Sbjct 781888 CAGCGTCTTATCTTCGCCGGAAAGCAATTGGAGGATGGCCGTACACTATCAGATTATAAT 781947 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 || || ||||| ||||| | |||||||||||||| | |||||||||| Sbjct 781948 ATCCAGAAAGAGTCGACACTGCATTTAGTATTACGTCTGAGAGGAGGTA 781996 Score = 122 bits (134), Expect = 1e-22 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAAC-ATAAC 146090 |||| || || | || || ||||| || || ||||| || | || || |||| || | Sbjct 781085 TGCAGATCTTTGTTAAGACTTTAACTGGCAAGACAATCACATTGGAAGTTGAACCATCA- 781143 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || |||||| ||||||| || |||||| ||| ||| ||||| || || || || || Sbjct 781144 GACACTATTGAAAATGTGAAGGCTAAAATCCAAGATAAGGAAGGAATCCCTCCAGACCAG 781203 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 || ||||| |||||||| |||||||| | || ||| | || | | ||||||||| Sbjct 781204 CAGAGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGCACTCTTTCTGATTATAAT 781263 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 || ||||| ||||| || | ||||||||| | || || ||||| |||| Sbjct 781264 ATCCAAAAGGAATCTACATTACATTTAGTACTGCGTTTGAGAGGTGGTA 781312 Score = 116 bits (128), Expect = 6e-21 Identities = 154/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | ||||| | || || ||||| ||||| | || || |||| | Sbjct 377401 TGCAGATTTTTGTGAAAACTCTTACGGGTAAAACCATTACATTAGAGGTTGAACCGTCTG 377460 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | ||||| ||||||||||| |||||| ||| |||||| || ||||| ||||| || | Sbjct 377461 ACACTATCGAAAATGTAAAAGCTAAAATTCAAGATAAAGAGGGTATTCCTCCCGACCAGC 377520 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 |||| || |||||||| || || ||||| || ||| || || | | |||||||| | Sbjct 377521 AAAGGCTTATTTTTGCCGGAAAGCAATTGGAAGATGGAAGGACCCTCTCCGATTATAACA 377580 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||| ||||| || | || ||||| || || Sbjct 377581 TTCAAAAGGAATCTACCCTTCACTTAGTTTTGCG 377614 Score = 113 bits (124), Expect = 7e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAAC-ATAAC 146090 |||| || || | || || || || || || ||||| ||| | || || |||| || | Sbjct 781541 TGCAGATTTTTGTCAAGACTTTGACTGGCAAGACAATCACTTTAGAAGTTGAACCATCA- 781599 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || ||| | ||||| || |||||| ||| || ||||| || || || ||||| Sbjct 781600 GACACCATTGAGAATGTGAAGGCTAAAATCCAAGACAAGGAAGGTATCCCTCCTGATCAG 781659 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 || | || || || || || || ||||| || ||| | || || ||||||||||| Sbjct 781660 CAGCGTCTTATCTTCGCCGGAAAGCAATTGGAGGATGGACGTACTCTATCAGATTATAAT 781719 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 || || ||||| ||||| | |||||||||||||| | |||||||||| Sbjct 781720 ATCCAGAAAGAGTCGACACTGCATTTAGTATTACGTCTGAGAGGAGGTA 781768 Score = 105 bits (116), Expect = 1e-17 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| | || ||||| |||||||| || || ||| | || || || | | | Sbjct 377857 TGCAAATATTTGTGAAGACATTGACAGGAAAGACCATCACTCTGGAGGTGGAGCCTTCGG 377916 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | ||||| ||| |||||| || ||||||||||| || || || |||| Sbjct 377917 ACACAATTGAGAATGTCAAAGCTAAAATTCAGGACAAAGAAGGCATCCCCCCTGACCAAC 377976 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||||| || |||||||| || || | || ||| | | || | | || || || | Sbjct 377977 AGAGACTGATCTTTGCAGGAAAGCAGCTTGAAGATGGTCGCACCCTCTCGGACTACAACA 378036 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | || || ||||| ||| ||||| | || | || | ||||| |||| Sbjct 378037 TCCAGAAGGAATCTACTCTCCATCTTGTCCTTCGTCTGAGAGGTGGTA 378084 Score = 96.9 bits (106), Expect = 5e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | || || || || || ||||| || || | || || |||| | Sbjct 781313 TGCAGATCTTTGTTAAGACTTTGACTGGCAAAACCATCACATTGGAAGTGGAACCATCTG 781372 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| ||||||| || |||||| ||| ||| ||||| || || || || || | Sbjct 781373 ACACCATTGAAAATGTGAAGGCTAAAATCCAAGATAAGGAAGGAATCCCTCCAGACCAGC 781432 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||||| ||||| || ||||| ||| | || ||| | || | | |||||||||| Sbjct 781433 AGAGACTTATTTTCGCTGGTAAGCAACTTGAAGATGGACGCACTCTTTCTGATTATAATA 781492 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | || |||||||| || | ||||| || | || || ||||| |||| Sbjct 781493 TCCAGAAAGAATCTACATTGCATTTGGTCCTGCGTTTGAGAGGTGGTA 781540 Score = 87.8 bits (96), Expect = 3e-12 Identities = 162/238 (68%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| ||||| | || ||||| ||||| || || || ||| | || || || | | Sbjct 378769 TGCAGATATTTGTGAAGACATTGACAGGGAAGACCATCACTTTGGAGGTGGAGCCCTCGG 378828 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | ||||| || || || || ||||||||||| || || || |||| Sbjct 378829 ACACAATTGAGAATGTCAAGGCCAAGATTCAGGACAAAGAAGGCATCCCCCCTGACCAAC 378888 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||||| || |||||||| || ||| | || ||| | | || | | || || || | Sbjct 378889 AGAGACTGATCTTTGCAGGAAAGCAACTTGAAGATGGTCGCACCCTCTCGGACTACAACA 378948 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 | || || ||||| || ||||| |||| | || | ||||| |||| ||||||| Sbjct 378949 TCCAGAAGGAATCTACCCTCCATCTAGTCCTTCGTCTGAGAGGTGGTATGCAAATATT 379006 Score = 87.8 bits (96), Expect = 3e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| | || ||||| ||||| || || || ||| | || || || | | Sbjct 379681 TGCAAATATTTGTGAAGACATTGACAGGGAAGACCATCACTTTGGAGGTGGAGCCCTCGG 379740 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | || || || |||||| || ||||||||||| || || || |||| Sbjct 379741 ACACAATTGAGAACGTCAAGGCTAAAATTCAGGACAAAGAAGGCATCCCCCCTGACCAAC 379800 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||||| || |||||||| || || | || ||| | | || | | || || || | Sbjct 379801 AGAGACTGATCTTTGCAGGAAAGCAGCTTGAAGATGGTCGCACCCTCTCGGACTACAACA 379860 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | || || ||||| ||| ||||| | || | || | ||||| |||| Sbjct 379861 TCCAGAAGGAATCTACTCTCCATCTTGTCCTTCGTCTGAGAGGTGGTA 379908 >seq1176 Length=404280 Score = 109 bits (120), Expect = 9e-19 Identities = 150/206 (73%), Gaps = 3/206 (1%) Strand=Plus/Plus Query 146062 AAACAATTACTATTGATGTAGAAC-ATAACGATACTATTCAAAATGTAAAAAATAAAATA 146120 ||||| | ||| | || || |||| || | || || ||| | ||||| || |||||| Sbjct 385007 AAACA-TCACTTTAGAAGTGGAACCATCA-GACACCATTGAGAATGTGAAGGCTAAAATT 385064 Query 146121 CAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTA 146180 ||| ||| ||||||||||| | || || |||||| | ||||||||||| ||||| || Sbjct 385065 CAAGATAAGGAAGGCATTCCCCTAGACCAGCAAAGATTGATTTTTGCAGGAAAACAGCTA 385124 Query 146181 GATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATTTAGTA 146240 || ||| | | || ||| | || || ||||| |||||||| || ||| | ||||| || Sbjct 385125 GAAGATGGTCGCACATTATCTGACTACAATATTCAAAAAGAGTCTACTCTTCATTTGGTC 385184 Query 146241 TTACGATTAAGAGGAGGTAAATAAAT 146266 || |||| | |||||| ||||| Sbjct 385185 TTGAGATTGTGGGGAGGTTTCTAAAT 385210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786132162453280