Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoebis_20sennae_20[genbank_20GCA_5F001586405.1_202016-03-10] 3,484 sequences; 287,490,372 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq3433 192 5e-44 seq286 161 8e-35 seq2763 136 3e-27 seq2618 118 8e-22 seq1176 114 1e-20 seq1698 100 2e-16 >seq3433 Length=253125 Score = 192 bits (212), Expect = 5e-44 Identities = 604/926 (65%), Gaps = 16/926 (2%) Strand=Plus/Plus Query 45064 GAAAACAACAAGCCCTATGAAATAGGTACCACTGACAAAACTGTCGCCGCTTATTTCGTT 45123 ||||| ||||||| | | ||| || || ||| ||| ||||| ||| || || || Sbjct 145714 GAAAAACACAAGCCGT-TCAAACAG--ACGTCTGGAAAAGTTGTCGGCGCGTACTTTGTC 145770 Query 45124 GAATGGGGAGTGTATGGGCGCAATTTTCCTATGAACCGCGTGCCAGTGCCGAACCTTACG 45183 |||||||| ||||| ||| || | ||| | | || || || | || || | || Sbjct 145771 GAATGGGGCGTGTACCCGCGAAAGTATCCAGTCGATCGTGTCCCCATTCCTAATTTAACT 145830 Query 45184 CATTTGTTATACGGTTTTATTCCTATATGCGGTGGCGATGGCATTAATGACAGTCTTAAA 45243 ||| || |||| || || || || || || ||||| |||||||| ||||||||| | || Sbjct 145831 CATCTGCTATATGGCTTCATCCCGATCTGTGGTGGTGATGGCATCAATGACAGTTTGAAG 145890 Query 45244 ACGATTACAGGCAGTTTTGAAGCGTTGCAAAAATCGTGCGCCGGCCGCTCAGATTTCAAA 45303 || ||| ||||| ||||||||||| || ||| | || ||| ||| || | Sbjct 145891 GAAATCGAAGGTAGTTTCCAAGCGTTGCAACGCTCATGCTCTGGGCGCGAAGACTTTACG 145950 Query 45304 GTGAGCATTCACGACCCATGGGCCGCTGTGCAAAAACCACAAAAAGGCGTTTCTGCTTGG 45363 ||| ||||| || || ||||||||| |||| || ||||| ||||| | ||| | ||| Sbjct 145951 GTGTCGATTCATGATCCCTGGGCCGCTTTGCAGAAGCCACAGAAAGGACTCTCTTCCTGG 146010 Query 45364 AACGAACCGTATAAAGGCAATTTTGGACAAATCATGGCTGTAAAACGGGCAAATCCTCAT 45423 || ||||| || ||||||||||| || ||| | ||||| | |||| || | ||| || Sbjct 146011 AATGAACCTTACAAAGGCAATTTCGGCCAATTGATGGCGTTGAAACAAGCCAGGCCTGAT 146070 Query 45424 TTAAAAGTGTTGCCATCGATTGGCGGCTGGACGCTGTCCGATCCGTTTTACCATTTGCAC 45483 || || | | ||||| ||||| |||||||| || | ||||| || | | || | Sbjct 146071 TTGAAGATTCTCCCATCTATTGGTGGCTGGACCCTCGCAGATCCTTTCTTCTTCTTCGAT 146130 Query 45484 GATGCGG---AGAAACGCGCTTTGTTTGTGGAATCCGTGCGCGAATTTTTAACTACGTGG 45540 || | | ||| || | | || || | || | | || || | || ||| Sbjct 146131 GACCCAGTTAAGAGACACCGT---TTCGTCGCTTCAGCGAAGGAGTTCCTTCTAACCTGG 146187 Query 45541 AAATTTTTTGACGGAGTCGATATAGATTGGGAGTTTCCCGGCGGCAATGGCGCCAATCCA 45600 ||| | |||||||| |||| || || |||||||| ||||| ||||| || || || Sbjct 146188 AAAATGTTTGACGGTCTCGACATCGACTGGGAGTTCCCCGGAGGCAAAGGAGCTAACGAG 146247 Query 45601 TCGGTGGGCGATCCAGAACGCGACGGTCTCACTTATGTAGCACTGCTGCGCGATTTGCGC 45660 | ||| | || ||| |||||| ||||| || | || || || ||||| Sbjct 146248 AAACTCGGC-AGCCCGAA--AGACGGTGAAACTTACGTCATATTGATGAAAGAGCTGCGC 146304 Query 45661 GACATGCTCGATCAATTGGCGCACGAAACCGGTCGGCGCTACGAACTGACTACGGCTATA 45720 || ||| | | |||| | | |||| || | |||||||| || | ||||| Sbjct 146305 GAAATGTTAAACGAATTATCTCTTCAAACGGGCAAGAAATACGAACTCACATCAGCTATC 146364 Query 45721 AGCGCCGGTGACGACAAAATCGCTTTGGTAGATTATCAAGACGCGCAAACTTATCTCGAT 45780 || ||||| ||||| || | | || || ||| || |||| || | || Sbjct 146365 AGTGCCGGCTGGGACAAGATTCAAGTAATCGACTACAAAGCTGCCCAAAACTACATGGAC 146424 Query 45781 CGAATCTTTTTAATGACGTATGATTTTAAAGGCGCTTGGTCGAACTCGGATTTGGGCCAT 45840 | || || | |||| || || || || || || ||||| || ||| || ||| Sbjct 146425 CACATATTCCTCATGAGTTACGACTTCAAGGGTGCCTGGTCCAATGATACTTTAGGACAT 146484 Query 45841 CAAACGGCCGTGTACGCGCCAGAATGGAATCGCGACG--AGCGTTACACAGTCGACTACG 45898 || || | | || || || || ||||||| ||| | | || |||||| |||| || Sbjct 146485 CAGACTTCATTATATGCACCTGAGTGGAATC-CGAAGGAAACG-TACACAACTGACTTCG 146542 Query 45899 CGGTGCACGTTTTGCTCGAAAAACGGGTAAAGCCTCAAAAAATCGTGCTCGGCGTGGCAA 45958 || || ||| | | || | || || ||| | || || || | ||||| || | Sbjct 146543 GTGTACAGTACTTGTTAGCTCAAGGTGTCAACCCTAAGAAGATTGTAGTAGGCGTCGCTA 146602 Query 45959 TGTACGGTCGCGGCTGGACCGGAGTA 45984 |||| || || || |||||||||||| Sbjct 146603 TGTATGGCCGTGGGTGGACCGGAGTA 146628 >seq286 Length=933739 Score = 161 bits (178), Expect = 8e-35 Identities = 174/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||||||||| | || ||||||||||| || || ||||||||||| || || || | Sbjct 782222 CCTCCCCTCAATCTCAAGACCAAATGAAGAGTAGACTCTTTTTGAATATTGTAGTCAGAT 782163 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || || ||||| || ||| | |||||||||||||| || || ||| Sbjct 782162 AATGTGCGACCATCTTCTAGCTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGGGGA 782103 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || || ||||| |||||| | || ||| | || | ||||| || |||| || Sbjct 782102 ATGCCTTCCTTATCTTG-AATTTTAGCCTTCACATTCTCAATGGTGTCTGATGGTTCCAC 782044 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| | ||| ||||| ||||||||||| ||||| || || || ||||| Sbjct 782043 TTCTAAAGTGATAGTCTTGCCAGTTAATGTTTTGACGAAAATTTGCAT 781996 Score = 149 bits (164), Expect = 5e-31 Identities = 172/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || |||| ||| || || | ||| || || ||||| || |||||||||||||| | Sbjct 377854 CCACCTCTCAGACGAAGGACTAGATGGAGGGTAGATTCCTTCTGAATGTTATAATCGGAG 377795 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||||| ||| || || ||||| |||||| | || | | || || || || ||| Sbjct 377794 AGGGTGCGACCATCTTCAAGCTGTTTACCAGCAAAGATAAGACGCTGTTGGTCTGGAGGA 377735 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||||||||| || |||||||| ||| || |||| | ||||||||| | ||||| Sbjct 377734 ATGCCCTCTTTGTCCTG-AATTTTTGCTTTAACGTTTTCAATTGTGTCAGAAGGCTCTAC 377676 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||| | || || ||||| ||||| | ||| || ||||| || |||||| Sbjct 377675 TTCCAATGTGATGGTTTTACCAGTCAGGGTCTTGACAAAAATTTGCATT 377627 Score = 149 bits (164), Expect = 5e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||||||||| || ||||| | || ||||| ||||| || |||||||| | | Sbjct 781310 CCACCTCTCAAACGCAGTACTAAATGTAATGTAGATTCCTTTTGGATATTATAATCAGAA 781251 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || || ||||| |||||| | || | ||| ||||| || || || Sbjct 781250 AGAGTGCGTCCATCTTCAAGCTGTTTACCAGCAAAAATAAGTCTCTGCTGGTCTGGAGGG 781191 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || || ||||| | ||| || ||| |||| | |||||| || |||| ||| Sbjct 781190 ATTCCTTCCTTATCTTGGATTTTAGCCTTCACATTTTCAATAGTGTCTGATGGTTCAACT 781131 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || || || ||||||||||| || |||||||| |||||||| Sbjct 781130 TCCAATGTGATTGTCTTGCCAGTTAAAGTCTTAACAAAGATCTGCAT 781084 Score = 149 bits (164), Expect = 5e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||||||||| |||||||| | || |||||||| || || |||||||| | | Sbjct 781538 CCACCTCTCAAACGCAGGACCAAATGCAATGTAGATTCTTTCTGGATATTATAATCAGAA 781479 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || ||||| || ||||| | || | ||| ||||| || || || Sbjct 781478 AGAGTGCGTCCATCTTCAAGTTGCTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGAGGG 781419 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || || ||||| | ||| || ||| |||| | |||||||| |||| ||| Sbjct 781418 ATTCCTTCCTTATCTTGGATTTTAGCCTTCACATTTTCAATGGTGTCAGATGGTTCCACT 781359 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || || ||||||||||| || || |||||||| |||||||| Sbjct 781358 TCCAATGTGATGGTTTTGCCAGTCAAAGTCTTAACAAAGATCTGCAT 781312 Score = 145 bits (160), Expect = 6e-30 Identities = 167/222 (75%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| || || ||||| || ||||| ||||||||||||||||| | | ||| | Sbjct 377615 ACGCAAAACTAAGTGAAGGGTAGATTCCTTTTGAATGTTATAATCGGAGAGGGTCCTTCC 377556 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | ||| || || ||| | || | |||||||| || || |||||||||||||| Sbjct 377555 ATCTTCCAATTGCTTTCCGGCAAAAATAAGCCTTTGCTGGTCGGGAGGAATACCCTCTTT 377496 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||||| |||||| | ||| ||| |||| | ||||||||| |||| || || | || | Sbjct 377495 ATCTTG-AATTTTAGCTTTTACATTTTCGATAGTGTCAGACGGTTCAACCTCTAATGTAA 377437 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAA 29791 | ||||| || || | ||||| ||||| |||||||| |||| Sbjct 377436 TGGTTTTACCCGTAAGAGTTTTCACAAAAATCTGCATCTTAA 377395 Score = 138 bits (152), Expect = 9e-28 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || |||| ||| || || ||||| || |||||||| || || || || || |||| Sbjct 378766 CCACCTCTCAGACGAAGGACTAAATGGAGAGTGGATTCCTTCTGGATATTGTAGTCCGAG 378707 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || |||||||| ||||| | |||| | ||||| || || ||| Sbjct 378706 AGAGTGCGACCATCTTCCAGTTGTTTACCAGCGAAAATCAGACGCTGCTGGTCTGGAGGA 378647 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| ||||||||||| ||| || | |||||| | || | ||||| ||| |||| || Sbjct 378646 ATACCTTCTTTGTCTTG-AATCTTGGCCTTGACATTCTCAATTGTGTCCGAAGGTTCAAC 378588 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| | ||| || || || || || || || || |||||||| ||||| Sbjct 378587 TTCCAAAGTGATGGTCTTCCCTGTCAATGTCTTTACAAATATTTGCAT 378540 Score = 131 bits (144), Expect = 1e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||||||||| || ||||| | || ||||| ||||| || || ||||| | Sbjct 781082 CCACCTCTCAAACGCAGTACTAAATGCAATGTAGATTCCTTTTGGATATTGTAATCAGAG 781023 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| || | ||| || |||||| | || | || || || || || || Sbjct 781022 AGTGTACGCCCATCTTCCAATTGCTTTCCAGCAAAGATAAGTCGCTGTTGGTCAGGAGGG 780963 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| || || ||||| ||| || | || ||| |||| | || || || ||||||| Sbjct 780962 ATACCTTCCTTATCTTG-AATCTTAGCCTTTACATTTTCAATGGTATCCGATGGTTCTAC 780904 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||| || ||||| ||||||||||| || ||||| ||||| ||||||||| Sbjct 780903 TTCTAGCGTTATTGTTTTGCCAGTCAATGTTTTCACAAAGATCTGCATT 780855 Score = 125 bits (138), Expect = 6e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || |||| ||| || || ||||| || |||||||| || ||||| || || || | Sbjct 378310 CCACCTCTCAGACGAAGGACTAAATGGAGAGTGGATTCCTTCTGAATATTGTAGTCTGAG 378251 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || |||||||| ||||| | |||| | |||||||| || ||| Sbjct 378250 AGAGTGCGACCATCTTCCAGTTGTTTACCAGCGAAGATCAGACGCTGCTGATCTGGAGGA 378191 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| ||||||||||| ||| || | ||||| | || | |||||||| | || || Sbjct 378190 ATACCTTCTTTGTCTTG-AATCTTGGCCTTGACGTTCTCAATTGTGTCAGAGGGCTCCAC 378132 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | ||| || || || || || || || || ||||| || ||||| Sbjct 378131 CTCCAAAGTGATGGTCTTTCCTGTCAATGTCTTCACAAAGATTTGCAT 378084 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || |||| ||| || || | ||| || || ||||| || || ||||| || |||| Sbjct 378538 CCACCTCTCAGACGAAGGACAAGATGGAGTGTAGATTCCTTCTGGATGTTGTAGTCCGAG 378479 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||||| ||| || || || || || ||| | |||| ||| || || || || || Sbjct 378478 AGGGTGCGACCATCTTCAAGCTGCTTTCCTGCAAAGATCAGTCTCTGTTGGTCAGGGGGG 378419 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 |||||||||||||| || ||| || | ||||||| | || | ||||| || | || || Sbjct 378418 ATACCCTCTTTGTCCTG-AATCTTGGCTTTGACATTCTCAATTGTGTCCGAGGGCTCCAC 378360 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | ||| || || || || || || || || |||||||| ||||| Sbjct 378359 CTCCAAAGTGATGGTCTTCCCTGTCAATGTCTTCACAAATATTTGCAT 378312 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || |||| ||| || || ||||| || |||||||| || || || || || || | Sbjct 379450 CCACCTCTCAGACGAAGGACTAAATGGAGAGTGGATTCCTTCTGGATATTGTAGTCGGAG 379391 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || |||||||| ||||| | |||| | ||||| || || || Sbjct 379390 AGAGTGCGACCATCTTCCAGTTGTTTACCAGCGAAGATCAGACGCTGCTGGTCTGGAGGG 379331 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||||||||| || |||||| | ||||| | || | ||||| ||| | || || Sbjct 379330 ATGCCCTCTTTGTCCTG-AATTTTAGCCTTGACGTTCTCAATTGTGTCCGAAGGCTCCAC 379272 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || || || || || || || || |||||||| ||||| Sbjct 379271 CTCCAGAGTGATGGTCTTTCCTGTCAATGTCTTCACAAATATTTGCAT 379224 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || |||| ||| || || | ||| || || ||||| || || ||||| || |||| Sbjct 378994 CCACCTCTCAGACGAAGGACTAGATGGAGGGTAGATTCCTTCTGGATGTTGTAGTCCGAG 378935 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||||| ||| || ||||| || || ||| | |||| ||| || || || || || Sbjct 378934 AGGGTGCGACCATCTTCAAGTTGCTTTCCTGCAAAGATCAGTCTCTGTTGGTCAGGGGGG 378875 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || |||||||| || ||| || | |||||| | || | ||||| || | || || Sbjct 378874 ATGCCTTCTTTGTCCTG-AATCTTGGCCTTGACATTCTCAATTGTGTCCGAGGGCTCCAC 378816 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | ||| || || || || || || || || |||||||||||||| Sbjct 378815 CTCCAAAGTGATGGTCTTCCCTGTCAATGTCTTCACAAATATCTGCAT 378768 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || |||| ||| || || | ||| || || ||||| || |||||||||||||| | Sbjct 379222 CCACCTCTCAGACGAAGGACTAGATGGAGAGTAGATTCCTTCTGAATGTTATAATCGGAG 379163 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||||| ||| || || ||||| |||||| | || | | || || || || ||| Sbjct 379162 AGGGTGCGACCATCTTCAAGCTGTTTACCAGCAAAGATAAGACGCTGTTGGTCTGGAGGA 379103 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||||||||| || ||| || | ||||| | || | ||||| || | || || Sbjct 379102 ATGCCCTCTTTGTCCTG-AATCTTGGCCTTGACGTTCTCAATTGTGTCCGAGGGCTCCAC 379044 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | ||| || || || || || || || || |||||||| ||||| Sbjct 379043 CTCCAAAGTGATGGTCTTTCCTGTCAATGTCTTTACAAATATTTGCAT 378996 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| |||| ||| | || ||||| || || || ||||| || || |||||||| | Sbjct 781994 CCTCCTCTCAGACGTAATACTAAATGCAGTGTCGACTCTTTCTGGATATTATAATCTGAT 781935 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| || | ||| || || || | || | | |||||||| || || Sbjct 781934 AGTGTACGGCCATCCTCCAATTGCTTTCCGGCGAAGATAAGACGCTGCTGATCAGGAGGG 781875 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||| || || ||||| | ||| || ||| | || | || || || |||| ||| Sbjct 781874 ATACCTTCCTTATCTTGGATTTTAGCCTTCACATTCTCAATGGTATCTGATGGTTCCACT 781815 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | ||| ||||| ||||||||||| ||||| || || || ||||| Sbjct 781814 TCTAAAGTAATAGTCTTGCCAGTTAATGTTTTGACGAAAATTTGCAT 781768 >seq2763 Length=379199 Score = 136 bits (150), Expect = 3e-27 Identities = 187/261 (72%), Gaps = 3/261 (1%) Strand=Plus/Minus Query 89681 CATCCGCAATACGCGACAAAAACGGCTCGGTTGCGCACTTTTGAACGCAACTGGCCTTGC 89740 ||| ||| |||||| || | ||||||| | || ||||||| | | ||||| | Sbjct 319911 CATTCGCGATACGCCTCAGAGGCGGCTCGCCTACGGACTTTTGC---CGATTGGCCCCGA 319855 Query 89741 GCTTTGAAACAAAAACCTGAGCAGTTGGCGGATGCCGGttttttttACACGGGCCAAGGC 89800 | || |||||||| || | ||||||| || ||||| ||||||||||| || ||| Sbjct 319854 AGTATGCGTCAAAAACCAGAAGAACTGGCGGAAGCGGGTTTCTTTTACACGGGACAGGGC 319795 Query 89801 GACAAGACGATTTGTTTCTTTTGCAACGGGGGCCTTAAGGATTGGGAAGATGGCGATGAA 89860 || || || | |||||||| ||| | || ||| | || || |||||| ||| || | | Sbjct 319794 GATAAAACTAAATGTTTCTTCTGCGATGGCGGCTTAAAAGACTGGGAAAATGATGACGTA 319735 Query 89861 CCTTGGGAACAACATGCGCGCTGGTTTGATAATTGCATCTATGTTCAACTAGTAAAAGGA 89920 ||||||||||| || ||||| |||||| ||| |||||||| ||||| ||||| Sbjct 319734 CCTTGGGAACAGCACGCGCGTTGGTTTTCGCGATGCGCTTATGTTCAGCTAGTGAAAGGT 319675 Query 89921 CGCGATTACGTGCAAAATGTT 89941 || || ||||| || || ||| Sbjct 319674 CGTGAATACGTTCAGAAGGTT 319654 Score = 86.0 bits (94), Expect = 5e-12 Identities = 99/131 (76%), Gaps = 2/131 (2%) Strand=Plus/Minus Query 89479 AAACGGTTTTTACTATATTGGT-GTGCACGACGAAGTGCGTTGCGCATTTTGTAAAGTAG 89537 ||| || ||||||||| | ||| ||| ||||||||||||||||| |||||||| || | Sbjct 320161 AAATGGATTTTACTATCTCGGTCGTGGG-GACGAAGTGCGTTGCGCCTTTTGTAAGGTGG 320103 Query 89538 AATTTAGGAAATGGATGGAAGGCGACAATCCGGCCGATCACCATCGAAAATGGGCGCCAC 89597 | | | || |||| ||||||||| | || || | | |||| | |||||| || | Sbjct 320102 AGATAATGAGATGGGACGAAGGCGACGACCCAGCTAAAGATCATCAACGATGGGCACCGC 320043 Query 89598 AATGTCCTTTT 89608 ||||||||||| Sbjct 320042 AATGTCCTTTT 320032 >seq2618 Length=201275 Score = 118 bits (130), Expect = 8e-22 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || |||| ||||| |||||||| || || ||||| || || | || || || ||| Sbjct 161645 AGAACCAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGGCCATCC 161704 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || | |||||| ||||| | ||||| | || || || || ||||| || || |||||| Sbjct 161705 TCCAATTGTTTACCAGCGAAGATCAAACGCTGTTGGTCTGGAGGAATTCCTTCCTTGTCT 161764 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | ||| || ||| |||| | |||||| ||| || || ||||| || || || Sbjct 161765 TGGATTTTAGCCTTCACATTTTCGATAGTGTCGGAAGCCTCCACCTCAAGGGTGATGGTC 161824 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAAA 29792 || || |||| |||||| || || ||||||||||| || Sbjct 161825 TTACCCGTTAGGGTTTTTACGAAGATCTGCATTTTCAA 161862 >seq1176 Length=404280 Score = 114 bits (126), Expect = 1e-20 Identities = 146/197 (74%), Gaps = 3/197 (2%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||||| ||| | || ||||||||||| || || ||||||||||| || || || | Sbjct 385201 CCTCCCCACAATCTCAAGACCAAATGAAGAGTAGACTCTTTTTGAATATTGTAGTCAGAT 385142 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || || ||||| || ||| | |||||||||||||| || | ||| Sbjct 385141 AATGTGCGACCATCTTCTAGCTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTAGGGGA 385082 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || || ||||| |||||| | || ||| | || | ||||| || |||| || Sbjct 385081 ATGCCTTCCTTATCTTG-AATTTTAGCCTTCACATTCTCAATGGTGTCTGATGGTTCCAC 385023 Query 29739 TTCAAGAGTTATAGTTT 29755 ||| | ||| || |||| Sbjct 385022 TTCTAAAGTGAT-GTTT 385007 >seq1698 Length=195807 Score = 100 bits (110), Expect = 2e-16 Identities = 99/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 29662 CTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACA 29721 || || |||||||| || || |||||||||||||| | ||| ||||||| |||| | | Sbjct 124573 CTCTGTTGATCCGGAGGGATTCCCTCTTTGTCTTGGATTTTGGCTTTGACATTTTCGATA 124632 Query 29722 GTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATC 29781 ||||| || |||| || ||||| || || ||||| || || | |||||| || || ||| Sbjct 124633 GTGTCCGAGGGTTCCACCTCAAGGGTGATGGTTTTCCCCGTAAGGGTTTTTACGAAGATC 124692 Query 29782 TGCATTTT 29789 ||||| || Sbjct 124693 TGCATCTT 124700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385202843111244