Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoebis_20sennae_20[genbank_20GCA_5F001586405.1_202016-03-10] 3,484 sequences; 287,490,372 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq286 84.2 4e-11 >seq286 Length=933739 Score = 84.2 bits (92), Expect = 4e-11 Identities = 99/136 (73%), Gaps = 11/136 (8%) Strand=Plus/Minus Query 81647 GTAAATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAA---------- 81696 ||| ||||||| || ||||| |||||||| || || | | ||||| || Sbjct 781052 GTAGATTCCTTTTGGATATTGTAATCAGAGAGTGTACGCCCATCTTCCAATTGCTTTCCA 780993 Query 81697 -CAAAGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCTTTT 81755 ||||||| |||| ||||| | ||| | || ||||||||||||||||||| || ||| Sbjct 780992 GCAAAGATAAGTCGCTGTTGGTCAGGAGGGATACCTTCCTTATCTTGAATCTTAGCCTTT 780933 Query 81756 ATATTTTCAATCGTAT 81771 | ||||||||| |||| Sbjct 780932 ACATTTTCAATGGTAT 780917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903371856442240