Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoebis_20sennae_20[genbank_20GCA_5F001586405.1_202016-03-10] 3,484 sequences; 287,490,372 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq2602 104 7e-19 seq2 102 3e-18 seq2968 100 9e-18 seq2551 100 9e-18 seq1479 100 9e-18 seq1041 100 9e-18 seq995 100 9e-18 seq3482 98.7 3e-17 seq3421 98.7 3e-17 seq3390 98.7 3e-17 >seq2602 Length=236244 Score = 104 bits (114), Expect = 7e-19 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| | Sbjct 129370 GCTGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 129311 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 129310 CCGGGTTTCGGC 129299 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| | Sbjct 126454 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 126395 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 126394 CCGGGTTTCGGC 126383 >seq2 Length=37279 Score = 102 bits (112), Expect = 3e-18 Identities = 68/76 (89%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 2765 TATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824 ||| || ||| |||||||||||||||||| |||||||||||||||||||||||| ||||| Sbjct 8732 TATCGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTC 8791 Query 2825 AACCCCGGGCTTCAGC 2840 || |||||| ||| || Sbjct 8792 AATCCCGGGTTTCGGC 8807 Score = 102 bits (112), Expect = 3e-18 Identities = 68/76 (89%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 2765 TATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824 |||||| ||| |||||||||||||||||| |||||||||||||||||||||||| ||| | Sbjct 12093 TATGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTCC 12034 Query 2825 AACCCCGGGCTTCAGC 2840 || |||||| ||| || Sbjct 12033 AATCCCGGGTTTCGGC 12018 >seq2968 Length=1463523 Score = 100 bits (110), Expect = 9e-18 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 2763 TTTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGT 2822 || || || ||| |||||||||||||||||| |||||||||||||||||||||||| ||| Sbjct 1062918 TTCATCGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGT 1062977 Query 2823 TCAACCCCGGGCTTCAGC 2840 |||| |||||| ||| || Sbjct 1062978 TCAATCCCGGGTTTCGGC 1062995 >seq2551 Length=62433 Score = 100 bits (110), Expect = 9e-18 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825 || || ||| |||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct 45119 ATCGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCA 45178 Query 2826 ACCCCGGGCTTCAGC 2840 | |||||| ||| || Sbjct 45179 ATCCCGGGTTTCGGC 45193 >seq1479 Length=130572 Score = 100 bits (110), Expect = 9e-18 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 2763 TTTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGT 2822 || || || ||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 67023 TTCATCGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGT 66964 Query 2823 TCAACCCCGGGCTTCAGC 2840 || | |||||| ||| || Sbjct 66963 TCGATCCCGGGTTTCGGC 66946 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 66417 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 66358 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 66357 CCGGGTTTCGGC 66346 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 66721 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 66662 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 66661 CCGGGTTTCGGC 66650 >seq1041 Length=494787 Score = 100 bits (110), Expect = 9e-18 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825 || || ||| |||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct 211648 ATCGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCA 211589 Query 2826 ACCCCGGGCTTCAGC 2840 | |||||| ||| || Sbjct 211588 ATCCCGGGTTTCGGC 211574 >seq995 Length=359585 Score = 100 bits (110), Expect = 9e-18 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 2763 TTTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGT 2822 || || || ||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 97521 TTCATCGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGT 97462 Query 2823 TCAACCCCGGGCTTCAGC 2840 || | |||||| ||| || Sbjct 97461 TCGATCCCGGGTTTCGGC 97444 Score = 100 bits (110), Expect = 9e-18 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825 || || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 157567 ATCGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCG 157508 Query 2826 ACCCCGGGCTTCAGC 2840 | |||||| ||| || Sbjct 157507 ATCCCGGGTTTCGGC 157493 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 98026 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 97967 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 97966 CCGGGTTTCGGC 97955 >seq3482 Length=266657 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 32332 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 32391 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 32392 CCGGGTTTCGGC 32403 >seq3421 Length=860758 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| | Sbjct 558644 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 558585 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 558584 CCGGGTTTCGGC 558573 >seq3390 Length=814849 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| | Sbjct 236448 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 236507 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 236508 CCGGGTTTCGGC 236519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15848996031180