Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoebis_20sennae_20[genbank_20GCA_5F001586405.1_202016-03-10] 3,484 sequences; 287,490,372 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq2763 140 3e-28 seq286 96.9 3e-15 >seq2763 Length=379199 Score = 140 bits (154), Expect = 3e-28 Identities = 335/505 (66%), Gaps = 29/505 (6%) Strand=Plus/Minus Query 99638 AACGGGTTTTATTATTTGGGGCGCGCGGACGAAGTGCGCTGCGCGTTTTGCAAAGTTGAA 99697 || || ||||| ||| | || || | |||||||||||| ||||| ||||| || || || Sbjct 320160 AATGGATTTTACTATCTCGGTCGTGGGGACGAAGTGCGTTGCGCCTTTTGTAAGGTGGAG 320101 Query 99698 ATAATGCGCTGGTTGGAGGGCGACGACCCGGCTGCAGATCATAAACGATGGGCGCCGCAA 99757 |||||| | ||| || ||||||||||| ||| ||||||| |||||||||| |||||| Sbjct 320100 ATAATGAGATGGGACGAAGGCGACGACCCAGCTAAAGATCATCAACGATGGGCACCGCAA 320041 Query 99758 TGCCCGTTTATGCAGCAG--AATCGAACGGTTGCTACG-GTCATTCAATCACCAG-TGCA 99813 || || ||| || || | || || | || | | | | || || ||| || Sbjct 320040 TGTCCTTTTCTG-AGACGTCAAGCGGGAGCCGGCAATGTGCCCTTAGATGCTCAGGTG-- 319984 Query 99814 AATTGTTAGTAAAGATGAATGTAAATTGTCG-------------------CG--TAAAAT 99852 | ||| || |||||| || || | || |||||| Sbjct 319983 -ACTGTCGGTCGAGATGAGTGCGGTGTGCGGGCACCACCCACAACCACCCCGGTTAAAAT 319925 Query 99853 GTCCGGCCCCGTGCACCCTAAATACGGCACTAAATCTGCACGTTTAGAAACTTTTGTGGA 99912 | |||| ||||| || | ||||| | | | | || || || ||||||| || Sbjct 319924 GCCCGGGCCCGTACATTCGCGATACGCCTCAGAGGCGGCTCGCCTACGGACTTTTGCCGA 319865 Query 99913 TTGGCCGCTCAGTTTGAAACAAAAACCAGAGCAATTGGCCGAAGCCGGTTTTTATTACAC 99972 |||||| | ||| || ||||||||||| || |||| ||||| ||||| | |||||| Sbjct 319864 TTGGCCCCGAAGTATGCGTCAAAAACCAGAAGAACTGGCGGAAGCGGGTTTCTTTTACAC 319805 Query 99973 CGGCAAAGGTGACAAAGTTAAATGTTTTCATTGCGACGGCGGCCTCAAAGACTGGGAAAG 100032 || | || || ||| ||||||||| ||||| |||||| | ||||||||||||| Sbjct 319804 GGGACAGGGCGATAAAACTAAATGTTTCTTCTGCGATGGCGGCTTAAAAGACTGGGAAAA 319745 Query 100033 CACCGACGAGCCGTGGCATGAACACGCACGTTGGTTTGATCGCTGCACATACGTGCGGCT 100092 |||| || ||| | | ||||| ||||||||| || ||| | || || | ||| Sbjct 319744 TGATGACGTACCTTGGGAACAGCACGCGCGTTGGTTTTCGCGATGCGCTTATGTTCAGCT 319685 Query 100093 TGTAAAGGGTTACGACTACGTGCAG 100117 || || ||| || ||||| ||| Sbjct 319684 AGTGAAAGGTCGTGAATACGTTCAG 319660 >seq286 Length=933739 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||||||||| || |||||||| ||||||||||| || || | ||| ||||| Sbjct 781996 ATGCAAATTTTCGTCAAAACATTAACTGGCAAGACTATCACTTTAGAAGTGGAACCATCA 782055 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | ||||| |||||| || || |||||| | ||| || || Sbjct 782056 GACACCATTGAGAATGTGAAGGCTAAAATTCAAGATAAGGAAGGCATTCCCCCAGACCAG 782115 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGAT--TCTAAAACTATGGGCGATTACA 106437 ||||| | |||| ||| || ||||| |||||||| || | | ||| || |||| Sbjct 782116 CAAAGATTGATTTTTGCAGGAAAACAGCTAGAAGATGGTCGCACATTAT--CTGACTACA 782173 Query 106438 ACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 | || |||||||| ||||| || ||||| || ||||| || | ||||| Sbjct 782174 ATATTCAAAAAGAGTCTACTCTTCATTTGGTCTTGAGATTGAGGGGAGG 782222 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||| || ||||| ||||||||||||||||| || || || | ||| |||||| Sbjct 780855 AATGCAGATCTTTGTGAAAACATTGACTGGCAAAACAATAACGCTAGAAGTAGAACCATC 780914 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| | ||| | || || || ||| || || ||||| | || ||| || Sbjct 780915 GGATACCATTGAAAATGTAAAGGCTAAGATTCAAGATAAGGAAGGTATCCCTCCTGACCA 780974 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGAT--TCTAAAACTATGGGCGATTAC 106436 ||| | ||||| | ||| || || ||||| |||||| | | ||| | |||||| Sbjct 780975 ACAGCGACTTATCTTTGCTGGAAAGCAATTGGAAGATGGGCGTACACTCT--CTGATTAC 781032 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || || ||||| ||||||||| | ||||||||| || | || |||| || Sbjct 781033 AATATCCAAAAGGAATCTACATTGCATTTAGTACTGCGTTTGAGAGGTGG 781082 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 ||||||||||||||| || || ||||||| || ||||| || ||||| ||| || Sbjct 377627 AATGCAAATTTTTGTCAAGACCCTGACTGGTAAAACCATCACATTGGAAGTAGAGCCTTC 377686 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 || | ||| | || ||| ||||||| |||||||| ||| | || || || Sbjct 377687 TGACACAATTGAAAACGTTAAAGCAAAAATTCAGGACAAAGAGGGCATTCCTCCAGACCA 377746 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 ||| | ||||| | ||| || ||||| | |||||| | || | |||||| || Sbjct 377747 ACAGCGTCTTATCTTTGCTGGTAAACAGCTTGAAGATGGTCGCACCCTCTCCGATTATAA 377806 Query 106439 CATACAAAAAGAATCTACACTACATTTAGT 106468 ||| || || |||||||| || ||| |||| Sbjct 377807 CATTCAGAAGGAATCTACCCTCCATCTAGT 377836 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || |||||||| || || ||||||||||| || || ||||| ||||| Sbjct 781084 ATGCAGATCTTTGTTAAGACTTTAACTGGCAAGACAATCACATTGGAAGTTGAACCATCA 781143 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || || ||| | ||||| ||||| || || ||||| | || || || Sbjct 781144 GACACTATTGAAAATGTGAAGGCTAAAATCCAAGATAAGGAAGGAATCCCTCCAGACCAG 781203 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || || ||||||| ||| || ||||| | |||||| ||| | ||||| || Sbjct 781204 CAGAGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGCACTCTTTCTGATTATAAT 781263 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || ||||| ||||||||| ||||||||||| || | || |||| || Sbjct 781264 ATCCAAAAGGAATCTACATTACATTTAGTACTGCGTTTGAGAGGTGG 781310 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 106257 AAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCC 106316 || ||||| |||||||| ||||| | || || || |||||||| | || ||||| Sbjct 377397 AAGATGCAGATTTTTGTGAAAACTCTTACGGGTAAAACCATTACATTAGAGGTTGAACCG 377456 Query 106317 GGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGAT 106376 || || | | | || ||| |||||| || ||||| || | || || Sbjct 377457 TCTGACACTATCGAAAATGTAAAAGCTAAAATTCAAGATAAAGAGGGTATTCCTCCCGAC 377516 Query 106377 CAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTAC 106436 || ||||||||||||| ||| || || ||||| |||||| | || | |||||| Sbjct 377517 CAGCAAAGGCTTATTTTTGCCGGAAAGCAATTGGAAGATGGAAGGACCCTCTCCGATTAT 377576 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTG 106472 ||||| ||||| |||||||| || || ||||| ||| Sbjct 377577 AACATTCAAAAGGAATCTACCCTTCACTTAGTTTTG 377612 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||||||||| || |||||||| ||||||||||| ||||| | ||| ||||| Sbjct 781768 ATGCAAATTTTCGTCAAAACATTAACTGGCAAGACTATTACTTTAGAAGTGGAACCATCA 781827 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | ||| | ||||| ||||| || || ||||| | || |||||| Sbjct 781828 GATACCATTGAGAATGTGAAGGCTAAAATCCAAGATAAGGAAGGTATCCCTCCTGATCAG 781887 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGAT--TCTAAAACTATGGGCGATTACA 106437 || | ||||| | || || || ||||| || ||| | | ||||| ||||| | Sbjct 781888 CAGCGTCTTATCTTCGCCGGAAAGCAATTGGAGGATGGCCGTACACTAT--CAGATTATA 781945 Query 106438 ACATACAAAAAGAATCTACACTACATTTAGTATT 106471 | || || ||||| || ||||| ||||||||||| Sbjct 781946 ATATCCAGAAAGAGTCGACACTGCATTTAGTATT 781979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402312516582272