Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoebis_20sennae_20[genbank_20GCA_5F001586405.1_202016-03-10] 3,484 sequences; 287,490,372 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq286 114 1e-20 >seq286 Length=933739 Score = 114 bits (126), Expect = 1e-20 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||||||||| | | ||| || || || | ||| |||||||||||||| ||||||| Sbjct 377628 TTCCACCACGAAGACGCAAAACTAAGTGAAGGGTAGATTCCTTTTGAATGTTATAATCGG 377569 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | ||| | | || |||| ||||| || ||||| || | || |||||||| | || Sbjct 377568 AGAGGGTCCTTCCATCTTCCAATTGCTTTCCGGCAAAAATAAGCCTTTGCTGGTCGGGAG 377509 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCC 35686 ||| | ||| || | | ||| ||| || || | | || | | ||||| || ||| Sbjct 377508 GAATACCCTCTTTAT-CTTGAATTTTAGCTTTTACATTTTCGATAGTGTCAGACGGTTCA 377450 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| | || || ||||||||||| | |||||||||||| |||||||| Sbjct 377449 ACCTCTAATGTAATGGTTTTACCCGTAAGAGTTTTCACAAAAATCTGCAT 377400 Score = 93.3 bits (102), Expect = 4e-14 Identities = 165/238 (69%), Gaps = 2/238 (1%) Strand=Plus/Minus Query 35500 CTCTTTATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTT 35559 || || |||||| || |||| | | ||||| ||||| ||| |||||| || ||||| Sbjct 380144 CTTTTAATTTCCGCCGCGTAGACGAAGTACCAAGTGTAAAGTAGACTCCTTCTGGATGTT 380085 Query 35560 GTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTG 35619 ||| || | | || || | || || || || ||||| ||||| |||| |||||||| Sbjct 380084 GTAGTCTGAAAGAGTGCGACCATCTTCTAGTTGTTTACCAGCAAAGATCAGACGCTGCTG 380025 Query 35620 GTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAGTTGCCACCGTGTCGC 35678 ||| | ||| | | || |||||| ||| ||| | ||| | | | | ||||| Sbjct 380024 GTCTGGAGGGATACCTTCTTTGTCC-TGAATTTTAGCCTTGACGTTCTCAATTGTGTCCG 379966 Query 35679 TCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | ||| || |||| ||||| || || || ||||| || |||||||| || ||||| Sbjct 379965 AAGGTTCGACTTCCAAAGTGATGGTCTTCCCTGTCAATGTCTTCACAAAGATTTGCAT 379908 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || | || || ||||| || ||| |||||||| || |||||||| | Sbjct 781082 CCACCTCTCAAACGCAGTACTAAATGCAATGTAGATTCCTTTTGGATATTGTAATCAGAG 781023 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || ||| | || |||| ||||| || ||||| || | ||||| ||||| | ||| Sbjct 781022 AGTGTACGCCCATCTTCCAATTGCTTTCCAGCAAAGATAAGTCGCTGTTGGTCAGGAGGG 780963 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| || ||||| ||| | | || | | || || | ||| || Sbjct 780962 ATACCTTCCTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTATCCGATGGTTCTACT 780903 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || | ||| || ||||| || ||||| ||||||||||| ||||||||| || Sbjct 780902 TCTAGCGTTATTGTTTTGCCAGTCAATGTTTTCACAAAGATCTGCATTATG 780852 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || || ||||| |||| | || || | || ||||| || ||||| || || Sbjct 379414 TCCTTCTGGATATTGTAGTCGGAGAGAGTGCGACCATCTTCCAGTTGTTTACCAGCGAAG 379355 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAGT 35664 |||| ||||||||||| | ||| | || ||| |||||| ||| ||| | ||| | | Sbjct 379354 ATCAGACGCTGCTGGTCTGGAGGGATGCCCTCTTTGTCC-TGAATTTTAGCCTTGACGTT 379296 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| | |||||||||| ||||| || || || ||||| || ||||| Sbjct 379295 CTCAATTGTGTCCGAAGGCTCCACCTCCAGAGTGATGGTCTTTCCTGTCAATGTCTTCAC 379236 Query 35725 AAATATCTGCAT 35736 |||||| ||||| Sbjct 379235 AAATATTTGCAT 379224 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || | | ||| || | || || |||||||| || ||||| Sbjct 378046 TCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCATCTTCAAGCTGCTTTCCTGCAAAG 377987 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC-AGAGT 35664 |||| | ||| ||||| | || | || || |||||| ||| ||| |||| | | | Sbjct 377986 ATCAGTCTCTGTTGGTCAGGGGGGATGCCTTCTTTGTCC-TGAATTTTAGCTTTGACATT 377928 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| | |||||||||| ||||| || || || ||||| || ||||| Sbjct 377927 CTCAATTGTGTCCGAAGGCTCCACCTCCAGAGTGATGGTCTTTCCTGTCAATGTCTTCAC 377868 Query 35725 AAATATCTGCAT 35736 |||||| ||||| Sbjct 377867 AAATATTTGCAT 377856 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || | | ||| || | || || || ||||| || ||||| Sbjct 378958 TCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCATCTTCAAGTTGCTTTCCTGCAAAG 378899 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| | ||| ||||| | || | || || |||||| ||||| ||| | | | Sbjct 378898 ATCAGTCTCTGTTGGTCAGGGGGGATGCCTTCTTTGTCCTGAATCTTGGCCTTGACATTC 378839 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| | |||||||||| ||||| || || || ||||| || |||||| Sbjct 378838 TCAATTGTGTCCGAGGGCTCCACCTCCAAAGTGATGGTCTTCCCTGTCAATGTCTTCACA 378779 Query 35726 AATATCTGCAT 35736 ||||||||||| Sbjct 378778 AATATCTGCAT 378768 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || || |||||||||| | || || | || ||||| || ||||| ||||| Sbjct 379642 TCCTTCTGGATATTGTAATCGGAGAGAGTGCGACCATCTTCCAGTTGTTTACCAGCAAAG 379583 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAGT 35664 |||| ||||||||||| | ||| | | || |||||| ||| ||| | ||| | | Sbjct 379582 ATCAGACGCTGCTGGTCTGGAGGGATACCTTCTTTGTCC-TGAATTTTAGCCTTGACGTT 379524 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| | ||| || |||| ||||| || || || ||||| || ||||| Sbjct 379523 CTCAATTGTGTCCGAAGGTTCGACTTCCAAAGTGATGGTCTTCCCTGTCAATGTCTTCAC 379464 Query 35725 AAATATCTGCAT 35736 |||||| ||||| Sbjct 379463 AAATATTTGCAT 379452 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || | | ||| || | || || |||||||| || ||||| Sbjct 378502 TCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCATCTTCAAGCTGCTTTCCTGCAAAG 378443 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| | ||| ||||| | || | | ||| |||||| ||||| || | | | Sbjct 378442 ATCAGTCTCTGTTGGTCAGGGGGGATACCCTCTTTGTCCTGAATCTTGGCTTTGACATTC 378383 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| | |||||||||| ||||| || || || ||||| || |||||| Sbjct 378382 TCAATTGTGTCCGAGGGCTCCACCTCCAAAGTGATGGTCTTCCCTGTCAATGTCTTCACA 378323 Query 35726 AATATCTGCAT 35736 ||||| ||||| Sbjct 378322 AATATTTGCAT 378312 Score = 82.4 bits (90), Expect = 7e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || | | ||| || | || || |||||||| || ||||| Sbjct 379870 TCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCATCTTCAAGCTGCTTTCCTGCAAAG 379811 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| | ||| ||||| | || | || || |||||| ||| ||| || | ||| Sbjct 379810 ATCAGTCTCTGTTGGTCAGGGGGGATGCCTTCTTTGTCC-TGAATTTTAGCCTTGACGTT 379752 Query 35666 GCCACC-GTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 || ||||| | |||||||||| ||||| || || || ||||| || ||||| Sbjct 379751 CTCAATTGTGTCCGAGGGCTCCACCTCCAAAGTGATGGTCTTCCCTGTCAATGTCTTCAC 379692 Query 35725 AAATATCTGCAT 35736 |||||| ||||| Sbjct 379691 AAATATTTGCAT 379680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450773967938720