Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoebis_20sennae_20[genbank_20GCA_5F001586405.1_202016-03-10] 3,484 sequences; 287,490,372 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq209 145 1e-29 >seq209 Length=133430 Score = 145 bits (160), Expect = 1e-29 Identities = 888/1398 (64%), Gaps = 44/1398 (3%) Strand=Plus/Minus Query 110708 TAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 110767 || ||||||| || |||||||||| ||||||||||||| | |||||||| || || Sbjct 14651 TAAATGTTTGAAGTAAATGGTTCAAATGATTCATTATTACCAAGAATTTGTGCAGTAGAT 14592 Query 110768 GCTGTTGGCATTGGTGCCATCA--AAAGACTGTTACGAAGACCCTTCTCCTTG--ATGCG 110823 || || ||||| ||||| | | || || |||||||||||| |||| ||| || Sbjct 14591 GCCGTGGGCATGGGTGCTAGTAGTAATGA--GTTACGAAGACCATTCT--TTGCAATTTT 14536 Query 110824 TTCCTTGAGAACATCCCAGTCGTAGT--TGAGCTTG-GTTTCACCTTCCCACATGTCAAA 110880 |||||| |||||| |||||| | | | | | |||| | |||||||| ||| | Sbjct 14535 TTCCTTAAGAACAGACCAGTCCCACAAATCTGATGGTGTTTTA---TCCCACATATCATA 14479 Query 110881 CTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTC 110940 || | | ||||| || ||| || ||| | || ||| || | || Sbjct 14478 TTGTAAAATTCCTTGACTGGCTGGACTTCCTTCATAAGTGCTATATACTCCATCTTTCTC 14419 Query 110941 AGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATT 111000 || | ||||| ||| || |||| || | | || || |||||||| || | || Sbjct 14418 TGCAAGTTCACTGCTTGCTTCCAAGGCGCCATAGTATATTGTTTCAAATATTTGTTGGTT 14359 Query 111001 CATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCAC-AAAATAAATACATCCGCGA 111059 || || | |||| || ||| ||| | | ||| |||| ||| || || | Sbjct 14358 CAACTTGATAGCTTTCTCACTTTCATATG-GAATACGCATTAAAACAAAGGTGTCGGCTA 14300 Query 111060 GACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC-A 111118 |||||||||| || | || || || || || | | ||| || ||| || ||| | Sbjct 14299 GACCTTGAACTCCAATTCCTATGGGCCTATGCCTAAGATTTGAGTTTTTAGCT-TCTGGA 14241 Query 111119 ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATT 111178 || || ||||| || ||||| | | ||| ||||||| || | || || || | | Sbjct 14240 ACTGGGTAAAAGTTGACATCAATTATTTTGTTAAGATTTTGTGTTATTATTTTGGTCACT 14181 Query 111179 TCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCG 111238 || | | |||||| ||| ||||| | |||||||| ||| || | || || Sbjct 14180 TCTTTTAACTTTTCAAAATTGAAAGTTTTA---TCTTCATTAACAAACATGTTTAGTGCT 14124 Query 111239 ATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATC-TGTGTACTCTAAAATTTCTGT 111297 ||||| |||||||| || || || ||||| | || ||||||||||| |||||| || Sbjct 14123 ATTGAAGCCAAATTACAGACTGCAACTTCATC-TGATGATGTGTACTCTACAATTTCAGT 14065 Query 111298 ACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGC 111357 ||| | ||| | || || || || | ||| ||||| || || || | ||||| | Sbjct 14064 ACAGAGATTGCTGCATTTTATTGTGCCAAGATTTTTTTGATTGCTTTTTCTATTGCAGGA 14005 Query 111358 ATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA 111417 ||||| || | |||||| || || || |||||| || | || | ||| || ||||| Sbjct 14004 GTCCTTATATAACATGTACGGTGTTCCAGTCTCCACTTGAGCTTCTACAATTGCTTTCCA 13945 Query 111418 -AACATCGGCGGCTGGTACAATGGCGTTGGC---CCGTCCCTCCGCCTCGTACTTTGTGT 111473 |||||| || ||| ||| | || || | | | || || || ||| | Sbjct 13944 TAACATCTGC-GCTTTTAC--TTGC-TTAACAAACTTTTTTTCTTGTTCATATTTTTCAT 13889 Query 111474 AGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGA 111533 | || ||||||||| || ||| || || || || || | | ||||| | Sbjct 13888 ATAGCTTTTCAAACTCTTCTCCCCAACAATCTGAAAGGCCAGGGCAATCATGGGGACACA 13829 Query 111534 AAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG 111593 || | ||| | | || ||||||| ||||| || | ||||| ||||| || | Sbjct 13828 TAATACTCCAATTTTCGTTTTTTTCAACCCTTTTCATAAATAAATCTGGTATCCAAAGAG 13769 Query 111594 ATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGG 111652 |||| | |||| | ||| || | ||||| | ||| || | | || | | Sbjct 13768 CATAAAACAACTCTCTTGCACGGA-CTTCTTCTTTCCCTGTATTTTTTTTGAGATCTAAG 13710 Query 111653 AACTCCATGATATCCGCGTGCCATGGCT-CAAG---ATAG--ACTGCGATAGATCCCTT- 111705 || || | ||||| || |||||||| | |||| |||| | ||| || || ||| Sbjct 13709 AATTCAAAAATATCTGCATGCCATGGTTCCAAGTAAATAGCAAATGCACCAGGTCTCTTA 13650 Query 111706 TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAAT 111765 | | ||| |||||| |||||| | |||||| |||| |||| | | |||||| | Sbjct 13649 TTGCCGC----CTTGATCTACATATCTAGCTGTGTTGTTATATACTCTTAACATTGGTAC 13594 Query 111766 AATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATG 111825 | |||| || |||||||| || || || || || || | | ||| Sbjct 13593 CAATCCATTAGAAACTCCATTTGTTCCAGCTATGTAGGACCCTTTAGCCCTTATACAATG 13534 Query 111826 GATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCC 111885 | || | || ||||| ||||| | ||||| || ||||| | ||||||| | Sbjct 13533 TACATGTAGACCTATACCACCAGCTGATTTTGAAATCATTGCACATTGTTTAAGAGTATC 13474 Query 111886 ATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGG 111945 ||| || || | || ||| || || | || || | ||| ||| || | ||| || Sbjct 13473 ATATATTCCTTCAATACTGTCGTCTTTCATAGCTATTAAGAAACAAGAAGAAAGCTGTGG 13414 Query 111946 TCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACAT 112005 || || ||| ||||| ||| || ||||| |||| || | || || || | Sbjct 13413 CCTCGGAGTAGCAGCAGAGAAAAGTGTTGGACTTGCATGTGTAAAGTATTTTTCAGATAA 13354 Query 112006 CTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCG 112065 | || |||||| | | | ||| ||||| ||||| || || || || ||||| || | Sbjct 13353 CAAGTTGTATGTATTGATGGCAGCATCAACATCTTCACCATGTATTCCAATTGCAACTCT 13294 Query 112066 CATGAACATGTACTGTGG 112083 ||| | ||| | |||||| Sbjct 13293 CATAAGCATATGCTGTGG 13276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628004649206400