Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoebis_20sennae_20[genbank_20GCA_5F001586405.1_202016-03-10] 3,484 sequences; 287,490,372 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq209 123 3e-23 >seq209 Length=133430 Score = 123 bits (136), Expect = 3e-23 Identities = 884/1408 (63%), Gaps = 60/1408 (4%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 |||||| | ||| | ||| | || || || || || ||||| ||||| ||||| ||| | Sbjct 13276 CCACAGCATATGCTTATGAGAGTTGCAATTGGAATACATGGTGAAGATGTTGATGCTGCC 13335 Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 104341 | | |||||| || | | || || || | || |||| ||||| || ||| Sbjct 13336 ATCAATACATACAACTTGTTATCTGAAAAATACTTTACACATGCAAGTCCAACACTTTTC 13395 Query 104342 AATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 104401 ||||| ||| || || || || | || ||| ||| | || || | || || ||| Sbjct 13396 TCTGCTGCTACTCCGAGGCCACAGCTTTCTTCTTGTTTCTTAATAGCTATGAAAGACGAC 13455 Query 104402 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 104461 || | || || |||| ||||||| | ||||| || ||||| | ||||| Sbjct 13456 AGTATTGAAGGAATATATGATACTCTTAAACAATGTGCAATGATTTCAAAATCAGCTGGT 13515 Query 104462 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAAT 104521 ||||| || | || | ||| | | || || || || || || |||||| Sbjct 13516 GGTATAGGTCTACATGTACATTGTATAAGGGCTAAAGGGTCCTACATAGCTGGAACAAAT 13575 Query 104522 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 104581 || || |||| | | |||||| | | |||| |||| |||||| | |||||| Sbjct 13576 GGAGTTTCTAATGGATTGGTACCAATGTTAAGAGTATATAACAACACAGCTAGATATGTA 13635 Query 104582 AATCAAGCTGGGCGTCGA-AAGGGATCTATCGCAGT--CTAT---CTTG-AGCCATGGCA 104634 |||||| ||| | | ||| || || ||| | |||| |||| | |||||||| Sbjct 13636 GATCAAG----GCGGCAATAAGAGACCTGGTGCATTTGCTATTTACTTGGAACCATGGCA 13691 Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAA------GGTGACGAGGAGGC 104688 || ||||| | || ||| | || |||||| || || | || || | Sbjct 13692 TGCAGATATTTTTGAATTCTTAGA------TCTCAAAAAAAATACAGGGAAAGAAGAAGT 13745 Query 104689 GCGGTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 104747 || ||| | || | || | ||||| ||||| |||||| | || ||||| || |||| Sbjct 13746 CCG-TGCAAGAGAGTTGTTTTATGCTCTTTGGATACCAGATTTATTTATGAAAAGGGTTG 13804 Query 104748 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCG 104807 | | | | |||||| | | | ||||| | | ||||| || || ||| Sbjct 13805 AAAAAAACGAAAATTGGAGTATTATGTGTCCCCATGATTGCCCTGGCCTTTCAGATTGTT 13864 Query 104808 TGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAG----GTCGGGCGACT 104863 ||| || ||||||||| || || ||| || || ||||| || | | Sbjct 13865 GGGGAGAAGAGTTTGAAAAGCTATATGAAAAATATGAACAAGAAAAAAAGTTTGTTAA-- 13922 Query 104864 GCGACGGTGCCAGCTGCCGATGTG-TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGG 104922 || | || ||| || ||||| |||||||| ||| | | ||||| |||||||| Sbjct 13923 GCAA--GTAAAAGC-GCAGATGTTATGGAAAGCAATTGTAGAAGCTCAAGTGGAGACTGG 13979 Query 104923 TACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGG 104982 ||||| |||||| | || || ||| |||| || ||| || |||||||| ||| | || Sbjct 13980 AACACCGTACATGTTATATAAGGACTCCTGCAATAGAAAAAGCAATCAAAAAAATCTTGG 14039 Query 104983 TGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGAC 105042 || || | |||||||||||| ||||| | || | ||| |||||| Sbjct 14040 CACAATAAAATGCAGCAATCTCTGTACTGAAATTGTAGAGTACACATCATCAGATGAAGT 14099 Query 105043 GGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC 105102 || || ||||| | || ||||| || || || || ||| || ||| || || Sbjct 14100 TGCAGTCTGTAATTTGGCTTCAATAGCACTAAACATGTTTGTTAATGAAGA---TAAAAC 14156 Query 105103 ATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGT 105162 || ||| |||||| | | ||||| || |||| | || |||| || |||| | | Sbjct 14157 TTTCAATTTTGAAAAGTTAAAAGAAGTGACCAAAATAATAACACAAAATCTTAACAAAAT 14216 Query 105163 TATTGATAGAAATTTTTACCCCGTT-GAGACTGCTCGTAAATCTAATATGAGACACCGTC 105221 |||||| || |||||||| ||| ||| ||| || || ||| | || || | | Sbjct 14217 AATTGATGTCAACTTTTACCCAGTTCCAGA-AGCTAAAAACTCAAATCTTAGGCATAGGC 14275 Query 105222 CAATTGGTCTCGGTGTTCAGGGTCTCGCGGA------TGTATTCATTCTTTGTCGCCACG 105275 | || || | || ||||| ||||| || || ||| || || | | || Sbjct 14276 CCATAGGAATTGGAGTTCAAGGTCTAGCCGACACCTTTGTTTTAATGCGTATTC------ 14329 Query 105276 CATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACG 105335 ||| ||| || |||| | | | || | |||||||| || || || | | Sbjct 14330 CATATGAAAGTGAGAAAGCTATCAAGTTGAACCAACAAATATTTGAAACAATATACTATG 14389 Query 105336 CCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGG 105395 ||| | || || || || | |||||| ||||| |||| || | ||| | Sbjct 14390 GCGCCTTGGAAGCAAGCAGTGAACTTGCAGAGAAAGATGGAGTATATAGCACTTATGAAG 14449 Query 105396 GTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCA--AGCT 105453 | |||||| ||||| | | |||| ||||||||||| | | |||| || | Sbjct 14450 GAAGTCCAGCCAGTCAAGGAATTTTACAATATGATATGTGGG-ATAAAACACCATCAGAT 14508 Query 105454 TCACTACGACTGGGAAGCTCTCAAGGAACGCAT--CAAGGAGAAGGGTCTTCGTAACAGT 105511 | | |||||| | ||| |||||| || ||| |||| |||||||||||| Sbjct 14509 T-TGTGGGACTGGTCTGTTCTTAAGGAAAAAATTGCAA--AGAATGGTCTTCGTAACTCA 14565 Query 105512 CTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGC 105571 | || | || || ||||| || || || || |||||||| | ||||||||||||| Sbjct 14566 TTACTACTAGCACCCATGCCCACGGCATCTACTGCACAAATTCTTGGTAATAATGAATCA 14625 Query 105572 TTTGAACCCTACACGACGAACATCTATC 105599 |||||||| | || | ||||| |||| Sbjct 14626 TTTGAACCATTTACTTCAAACATTTATC 14653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583235398992160