Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoebis_20sennae_20[genbank_20GCA_5F001586405.1_202016-03-10] 3,484 sequences; 287,490,372 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq2597 95.1 1e-14 >seq2597 Length=45916 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364 ||||| ||||| | | ||| || | |||||||| ||| || | ||||||||| || Sbjct 20046 GTGAAGATGTATCTGGGGCTGGCCGAGTCCTTGCCCCCACACAGCCTCGTACCGAACTGA 20105 Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424 || | |||||||| || || | ||||||| ||||||| |||| || |||||||||||| Sbjct 20106 CCGCGGGGCTCCAATAGATTAATATTGTTGGAGCCCACATAGTTCTGCGCCAAGTTGACA 20165 Query 117425 ATCGT 117429 ||||| Sbjct 20166 ATCGT 20170 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088 ||||||||||||| || |||||||| |||||||| || ||||| ||| || ||||| Sbjct 20046 GTGAAGATGTATCTGGGGCTGGCCGAGTCCTTGCCCCCACACAGCCTCGTACCGAACTGA 20105 Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACA 152148 || |||||| | || || | ||||||| |||||| | ||||| ||||| || ||| Sbjct 20106 CCGCGGGGCTCCAATAGATTAATATTGTTGGAGCCCACATAGTTCTGCGCCAAGTTGACA 20165 Query 152149 ATCGT 152153 ||||| Sbjct 20166 ATCGT 20170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547192168743200