Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoebis_20sennae_20[genbank_20GCA_5F001586405.1_202016-03-10] 3,484 sequences; 287,490,372 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq3433 174 1e-38 seq286 149 5e-31 seq2618 127 2e-24 seq1176 96.9 3e-15 seq1698 91.5 1e-13 seq1686 91.5 1e-13 >seq3433 Length=253125 Score = 174 bits (192), Expect = 1e-38 Identities = 760/1186 (64%), Gaps = 16/1186 (1%) Strand=Plus/Minus Query 53383 TTCAAAAGATCTCCGTTGTCCGCGTCGATTTCCCACGCAAACAATCCACCGAGATCGTTT 53442 |||| || || || || || || || |||||||||||||| |||||||| | || ||| Sbjct 146924 TTCAGAATGTCACCATTATCTGCATCAATTTCCCACGCAAATAATCCACCCAAATAATTT 146865 Query 53443 TCAATCACATACTGGCCCTTGTCTAGCACGGAA-TCGATGCTGTCGTAACTGATTAAATC 53501 | |||| || | || || || ||||| ||| | ||||||| ||| ||| || Sbjct 146864 TTCCTCACGTATTTACCTTTCTCAGTAACGGATCTCGC-GTTGTCGTATGTGACTAAGTC 146806 Query 53502 GCCAGAGTTTTTATTGAATACAAACGCTGCTTTGGCTGTAGTGTCGTAAGTGTAA-TCGT 53560 |||| | | |||| ||| | | ||||| ||| |||| || ||| || || Sbjct 146805 TCCAGTGGATGGTCTGAACACATAAGGTGCTTGAGCTACGTTGTCATA-GTGGAACTCCC 146747 Query 53561 ATTGA---TGGCCAATTTTTTCGTCAATTTTTCGGTAATCAACGACTCCGTCTTCCCATG 53617 ||| || |||||| | | || | | || || || || ||||| | ||||| Sbjct 146746 ATTTGCCTTGTGCAATTTCATTAGCGATCTCCCTATAGTCCACAACGCCGTCCTGCCATG 146687 Query 53618 TGCCTGTAACAGGGCCAGTTGCCACACCGGTGAACGGATTGTCATCGCGGTAGCCGCTCA 53677 | || | ||| || || || || || | ||| ||||| | || || || | Sbjct 146686 TTCCCTTGCAAGGTCCTGTCGCAACTCCAGAGAAGGGATTACCCTCTTTATAATCGTGTA 146627 Query 53678 CTCCAGTCCAACCGCGCCCGTACATCGCCACTCCGAGAACAATTTT-TTCCTGTTGAACT 53736 |||| ||||| || || || ||||| || || || | ||||| || || ||||| | Sbjct 146626 CTCCGGTCCACCCACGGCCATACATAGCGACGCCTACTACAATCTTCTTAGGGTTGA-CA 146568 Query 53737 TTTTGTTCGAGCAACGCGCGCACGGCAACATCGGCCGTGTAATGCTCGCTGGGAGACCAA 53796 ||| | | ||| | || | | || | ||||| || | ||| ||| Sbjct 146567 CCTTGAGCTAACAAGTACTGTACACCGAAGTCAGTTGTGTACGTTTCCTTCGGATTCCAC 146508 Query 53797 ACCGGCGCGTAAATCGCCGTTTGATGTCCCAAATCGGTGTTTGACCAAGCGCCTTTAAAA 53856 | || || || | | || |||||||| ||| || ||||| || || || || Sbjct 146507 TCAGGTGCATATAATGAAGTCTGATGTCCTAAAGTATCATTGGACCAGGCACCCTTGAAG 146448 Query 53857 TCATACGACATTaaaaaaaTTCTGTCCAGGTATTGTTGGGCGTCGCGATAGTTGACGACC 53916 || || ||| | || || ||||| ||| | |||||| | |||| || || Sbjct 146447 TCGTAACTCATGAGGAATATGTGGTCCATGTAGTTTTGGGCAGCTTTGTAGTCGATTACT 146388 Query 53917 GCAATTTTATCATTGCCTGCACTGATTGCGCTAGTCAACTCGAACTTTCGT-CCAGTTTC 53975 ||| || || ||| |||||||| || || | ||| | |||| | || |||| Sbjct 146387 TGAATCTTGTCCCAGCCGGCACTGATAGCTGATGTGAGTTCGTA-TTTCTTGCCCGTTTG 146329 Query 53976 CAATTCCAATTGATCCAACATTTGTCGCAACTCTTTTAACAACACCACATACGTTAAACT 54035 | |||| | ||||||| |||| |||||| | ||| | || || ||| || Sbjct 146328 AAGAGATAATTCGTTTAACATTTCGCGCAGCTCTTTCATCAATATGACGTAAGTTTCACC 146269 Query 54036 ATCTTTTTGAGGATCGCCCACGGACGGATTGGCACCGTTTCCGCCAGGAAACTCCCAATC 54095 ||||| | | | ||| | | || || || || || || || |||||||| || Sbjct 146268 GTCTTTCGG--GCT-GCCGAGTTTCTCGTTAGCTCCTTTGCCTCCGGGGAACTCCCAGTC 146212 Query 54096 GACGTCGACACCATCAAAAAATTTCCACGTCAATAGGAATTCGCGCACGGAATCCACAAA 54155 || ||||| ||| ||||| | |||||| || | ||||| || | | ||| | || || Sbjct 146211 GATGTCGAGACCGTCAAACATTTTCCAGGTTAGAAGGAACTCCTTCGCTGAAGCGACGAA 146152 Query 54156 CACTTTGCGTTTGGAA-GAATCGTGGAAATGGTAAAACGGATCCGATAACGTCCAACCGC 54214 || || | | | | || | ||| | | || ||||| | | ||||| || | Sbjct 146151 -ACGGTGTCTCTTAACTGGGTCATCGAAGAAGAAGAAAGGATCTGCGAGGGTCCAGCCAC 146093 Query 54215 CGATTGACGGTAATACTTTGACGTTGGGATTCGCTTTTTTCACGGCCATAATCTGTCCAA 54274 | || || || | | || | | || | |||| ||||| ||||| | || || | Sbjct 146092 CAATAGATGGGAGAATCTTCAAATCAGGCCTGGCTTGTTTCAACGCCATCAATTGGCCGA 146033 Query 54275 AATTGCCTTTATACGGTTCGTTCCAGGCGGAGACGCCTTTTTGCGGTTTTTGCACCGCCG 54334 |||||||||| || ||||| ||||||| |||| ||||| || || || |||| || | Sbjct 146032 AATTGCCTTTGTAAGGTTCATTCCAGGAAGAGAGTCCTTTCTGTGGCTTCTGCAAAGCGG 145973 Query 54335 CCCAAGGATCATGGATGGCTACTTTAAAATCCGACCGGCCAGCGCAAGATCTTTGTAGAG 54394 |||| |||||||| || | || |||| || || |||| ||| || | ||| | | Sbjct 145972 CCCAGGGATCATGAATCGACACCGTAAAGTCTTCGCGCCCAGAGCATGAGCGTTGCAACG 145913 Query 54395 CTTCAAAACTGCCCGGTATAGTTTTTAAACTGTCATTTATTCCGTCGCCGCCGCAAATTG 54454 ||| ||||| || || || ||||||||||| || || || || || || || | Sbjct 145912 CTTGGAAACTACCTTCGATTTCCTTCAAACTGTCATTGATGCCATCACCACCACAGATCG 145853 Query 54455 GCACAAAACCGTACAAAAGATGCGTCAAATTAGGCACGGGCACTTTGTCCATTGGAAAAT 54514 | | || || || | ||||| || |||||||| | ||| || || | |||| | | Sbjct 145852 GGATGAAGCCATATAGCAGATGAGTTAAATTAGGAATGGGGACACGATCGACTGGATACT 145793 Query 54515 TTCGTCCGTACACTCCCCATTCTACAAAATAGGCGGCCACAACTTT 54560 |||| |||||| |||||||| ||||| || ||| | |||||||| Sbjct 145792 TTCGCGGGTACACGCCCCATTCGACAAAGTACGCGCCGACAACTTT 145747 >seq286 Length=933739 Score = 149 bits (164), Expect = 5e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| |||||||| || || || | ||||| | || || |||||||| Sbjct 377400 ATGCAGATTTTTGTGAAAACTCTTACGGGTAAAACCATTACATTAGAGGTTGAACCGTCT 377459 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || ||| ||||||||||| ||||| || || || ||||| || Sbjct 377460 GACACTATCGAAAATGTAAAAGCTAAAATTCAAGATAAAGAGGGTATTCCTCCCGACCAG 377519 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | ||||| || ||||||||||| | |||| | |||||||| ||| Sbjct 377520 CAAAGGCTTATTTTTGCCGGAAAGCAATTGGAAGATGGAAGGACCCTCTCCGATTATAAC 377579 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||||||||| || ||| | || || ||||||||| | || ||||| || Sbjct 377580 ATTCAAAAGGAATCTACCCTTCACTTAGTTTTGCGTCTTCGTGGTGGAAT 377629 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| ||||||||||| || |||| || ||| | || ||| | ||||| ||||| || Sbjct 378540 ATGCAAATATTTGTAAAGACATTGACAGGGAAGACCATCACTTTGGAAGTTGAACCTTCG 378599 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| ||||| || ||||||||||||||||| || || || || || Sbjct 378600 GACACAATTGAGAATGTCAAGGCCAAGATTCAAGACAAAGAAGGTATTCCTCCAGACCAG 378659 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| || |||||| ||||||| || || | || || ||||| Sbjct 378660 CAGCGTCTGATTTTCGCTGGTAAACAACTGGAAGATGGTCGCACTCTCTCGGACTACAAT 378719 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||| || || | ||||| || | ||| || | ||||| || Sbjct 378720 ATCCAGAAGGAATCCACTCTCCATTTAGTCCTTCGTCTGAGAGGTGGTAT 378769 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| |||||||| || || |||| || ||| | || ||| | ||||| ||||| || Sbjct 379452 ATGCAAATATTTGTGAAGACATTGACAGGGAAGACCATCACTTTGGAAGTCGAACCTTCG 379511 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| ||||| |||||||| ||||||||||| || || || || || Sbjct 379512 GACACAATTGAGAACGTCAAGGCTAAAATTCAGGACAAAGAAGGTATCCCTCCAGACCAG 379571 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || || |||||| ||||||| || || | ||||||||||| Sbjct 379572 CAGCGTCTGATCTTTGCTGGTAAACAACTGGAAGATGGTCGCACTCTCTCCGATTACAAT 379631 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||| || || | ||||| || | ||| || | ||||| || Sbjct 379632 ATCCAGAAGGAATCCACTCTCCATTTAGTCCTTCGTCTGAGAGGTGGTAT 379681 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || || |||| || ||| | || ||| | ||||| ||||| || Sbjct 379908 ATGCAAATCTTTGTGAAGACATTGACAGGGAAGACCATCACTTTGGAAGTCGAACCTTCG 379967 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| ||||| |||||||| ||||||||||| || || || || || Sbjct 379968 GACACAATTGAGAACGTCAAGGCTAAAATTCAGGACAAAGAAGGTATCCCTCCAGACCAG 380027 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || || |||||| | ||||| || || |||| || |||||| Sbjct 380028 CAGCGTCTGATCTTTGCTGGTAAACAACTAGAAGATGGTCGCACTCTTTCAGACTACAAC 380087 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || |||||||| || ||||| ||||| | ||| | || || || Sbjct 380088 ATCCAGAAGGAGTCTACTTTACACTTGGTACTTCGTCTACGCGGCGG 380134 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || || |||| || ||| | || ||| | || ||||| || || Sbjct 378084 ATGCAAATCTTTGTGAAGACATTGACAGGAAAGACCATCACTTTGGAGGTGGAGCCCTCT 378143 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| ||||| || ||||||||||||||||| || || || ||||| Sbjct 378144 GACACAATTGAGAACGTCAAGGCCAAGATTCAAGACAAAGAAGGTATTCCTCCAGATCAG 378203 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| || |||||| ||||||| || || | || || ||||| Sbjct 378204 CAGCGTCTGATCTTCGCTGGTAAACAACTGGAAGATGGTCGCACTCTCTCAGACTACAAT 378263 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| ||||| || || | ||||| || | ||| || | ||||| || Sbjct 378264 ATTCAGAAGGAATCCACTCTCCATTTAGTCCTTCGTCTGAGAGGTGGTAT 378313 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| ||||||||||| || |||| || ||| | || ||| | || ||||| || || Sbjct 378996 ATGCAAATATTTGTAAAGACATTGACAGGAAAGACCATCACTTTGGAGGTGGAGCCCTCG 379055 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| ||||| || ||||| |||||||| ||||| || || || ||| Sbjct 379056 GACACAATTGAGAACGTCAAGGCCAAGATTCAGGACAAAGAGGGCATTCCTCCAGACCAA 379115 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || || ||||| | ||||| || ||| | |||||||| ||| Sbjct 379116 CAGCGTCTTATCTTTGCTGGTAAACAGCTTGAAGATGGTCGCACCCTCTCCGATTATAAC 379175 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| ||||| || || | ||| | || | ||| || | ||||| || Sbjct 379176 ATTCAGAAGGAATCTACTCTCCATCTAGTCCTTCGTCTGAGAGGTGGTAT 379225 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||| |||| ||||| | || || || ||||| ||||| || Sbjct 780856 ATGCAGATCTTTGTGAAAACATTGACTGGCAAAACAATAACGCTAGAAGTAGAACCATCG 780915 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || || || |||||||| || ||||| || || || || ||| Sbjct 780916 GATACCATTGAAAATGTAAAGGCTAAGATTCAAGATAAGGAAGGTATCCCTCCTGACCAA 780975 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | || || || ||||||||||| | || | || |||||||| Sbjct 780976 CAGCGACTTATCTTTGCTGGAAAGCAATTGGAAGATGGGCGTACACTCTCTGATTACAAT 781035 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || |||||||| || || || ||||| || |||||||| | ||||| || Sbjct 781036 ATCCAAAAGGAATCTACATTGCATTTAGTACTGCGTTTGAGAGGTGGTAT 781085 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||| | || |||||| |||||||| | ||||||||||| || Sbjct 781768 ATGCAAATTTTCGTCAAAACATTAACTGGCAAGACTATTACTTTAGAAGTGGAACCATCA 781827 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||||| || || ||||| ||||| || ||||| || || || ||||| Sbjct 781828 GATACCATTGAGAATGTGAAGGCTAAAATCCAAGATAAGGAAGGTATCCCTCCTGATCAG 781887 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | |||||| || |||||||| || | || | || ||||| || Sbjct 781888 CAGCGTCTTATCTTCGCCGGAAAGCAATTGGAGGATGGCCGTACACTATCAGATTATAAT 781947 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || |||||||| | ||||| || || ||| || | || || || Sbjct 781948 ATCCAGAAAGAGTCGACACTGCATTTAGTATTACGTCTGAGAGGAGGTAT 781997 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||| | || |||||| |||| ||| | ||||||||||| || Sbjct 781996 ATGCAAATTTTCGTCAAAACATTAACTGGCAAGACTATCACTTTAGAAGTGGAACCATCA 782055 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || || ||||||||||| || |||||||| || || || || Sbjct 782056 GACACCATTGAGAATGTGAAGGCTAAAATTCAAGATAAGGAAGGCATTCCCCCAGACCAG 782115 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | || || ||||| | ||||| || || | || || ||||| Sbjct 782116 CAAAGATTGATTTTTGCAGGAAAACAGCTAGAAGATGGTCGCACATTATCTGACTACAAT 782175 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 |||||||| ||||| || | |||||||| ||| | ||| |||| || Sbjct 782176 ATTCAAAAAGAGTCTACTCTTCATTTGGTCTTGAGATTGAGGGGAGG 782222 Score = 123 bits (136), Expect = 2e-23 Identities = 177/247 (72%), Gaps = 3/247 (1%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||||||||| || || |||| || ||| | || ||| | || ||||| || || Sbjct 378768 ATGCAGATATTTGTGAAGACATTGACAGGGAAGACCATCACTTTGGAGGTGGAGCCCTCG 378827 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| ||||| || ||||| |||||||||||||| || || || ||| Sbjct 378828 GACACAATTGAGAATGTCAAGGCCAAGATTCAGGACAAAGAAGGCATCCCCCCTGACCAA 378887 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || || || ||| | ||||| || ||| | || || |||||| Sbjct 378888 CAGAGACTGATCTTTGCAGGAAAGCAACTTGAAGATGGTCGCACCCTCTCGGACTACAAC 378947 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCATAACAAACACT 27227 || || ||||| || ||| | ||| | || | ||| || | ||||| || |||| | Sbjct 378948 ATCCAGAAGGAATCTACCCTCCATCTAGTCCTTCGTCTGAGAGGTGGTAT-GCAAATA-- 379004 Query 27228 TTTGTAA 27234 ||||||| Sbjct 379005 TTTGTAA 379011 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| |||||||| || || |||| || ||| | || ||||| || ||||| || || Sbjct 377856 ATGCAAATATTTGTGAAGACATTGACAGGAAAGACCATCACTCTGGAGGTGGAGCCTTCG 377915 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| |||||| |||||||| |||||||||||||| || || || ||| Sbjct 377916 GACACAATTGAGAATGTCAAAGCTAAAATTCAGGACAAAGAAGGCATCCCCCCTGACCAA 377975 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || || || || | ||||| || ||| | || || |||||| Sbjct 377976 CAGAGACTGATCTTTGCAGGAAAGCAGCTTGAAGATGGTCGCACCCTCTCGGACTACAAC 378035 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||| || || | ||| | || | ||| || | ||||| || Sbjct 378036 ATCCAGAAGGAATCTACTCTCCATCTTGTCCTTCGTCTGAGAGGTGGTAT 378085 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| |||||||| || || |||| || ||| | || ||| | || ||||| || || Sbjct 379680 ATGCAAATATTTGTGAAGACATTGACAGGGAAGACCATCACTTTGGAGGTGGAGCCCTCG 379739 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| ||||| |||||||| |||||||||||||| || || || ||| Sbjct 379740 GACACAATTGAGAACGTCAAGGCTAAAATTCAGGACAAAGAAGGCATCCCCCCTGACCAA 379799 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || || || || | ||||| || ||| | || || |||||| Sbjct 379800 CAGAGACTGATCTTTGCAGGAAAGCAGCTTGAAGATGGTCGCACCCTCTCGGACTACAAC 379859 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||| || || | ||| | || | ||| || | ||||| || Sbjct 379860 ATCCAGAAGGAATCTACTCTCCATCTTGTCCTTCGTCTGAGAGGTGGTAT 379909 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || ||| |||| ||||| | || || | ||||||||||| || Sbjct 781312 ATGCAGATCTTTGTTAAGACTTTGACTGGCAAAACCATCACATTGGAAGTGGAACCATCT 781371 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || ||||| ||||| || ||||| || || || || || Sbjct 781372 GACACCATTGAAAATGTGAAGGCTAAAATCCAAGATAAGGAAGGAATCCCTCCAGACCAG 781431 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||| || || ||| | ||||| | || |||| ||||| || Sbjct 781432 CAGAGACTTATTTTCGCTGGTAAGCAACTTGAAGATGGACGCACTCTTTCTGATTATAAT 781491 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || || || || || |||||||| |||||||| | ||||| || Sbjct 781492 ATCCAGAAAGAATCTACATTGCATTTGGTCCTGCGTTTGAGAGGTGGTAT 781541 >seq2618 Length=201275 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || |||||||| || || || ||| | || || ||||| ||||| | ||| Sbjct 161856 ATGCAGATCTTCGTAAAAACCCTAACGGGTAAGACCATCACCCTTGAGGTGGAGGCTTCC 161797 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || ||||| |||||||| ||||| || || || || ||| Sbjct 161796 GACACTATCGAAAATGTGAAGGCTAAAATCCAAGACAAGGAAGGAATTCCTCCAGACCAA 161737 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||||| || | ||| || ||||||||||| || | || ||||||| |||||| Sbjct 161736 CAGCGTTTGATCTTCGCTGGTAAACAATTGGAGGATGGCCGTACTCTTTCCGACTACAAC 161677 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 || || ||||| || || | || ||||| Sbjct 161676 ATCCAGAAGGAATCCACTCTTCACCTGGTT 161647 >seq1176 Length=404280 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 27024 ATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGAC 27083 || ||| | ||||||||||| || ||| | ||||||| || || ||||||||||| Sbjct 385011 ATCACTTTAGAAGTGGAACCATCAGACACCATTGAGAATGTGAAGGCTAAAATTCAAGAT 385070 Query 27084 AAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGAC 27143 || |||||||| || | || || || | || || | || || ||||| | ||||| Sbjct 385071 AAGGAAGGCATTCCCCTAGACCAGCAAAGATTGATTTTTGCAGGAAAACAGCTAGAAGAT 385130 Query 27144 AGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGT 27203 || || | || || ||||| |||||||| ||||| || | |||||||| ||| | Sbjct 385131 GGTCGCACATTATCTGACTACAATATTCAAAAAGAGTCTACTCTTCATTTGGTCTTGAGA 385190 Query 27204 TTGCGGGGTGG 27214 ||| |||| || Sbjct 385191 TTGTGGGGAGG 385201 >seq1698 Length=195807 Score = 91.5 bits (100), Expect = 1e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || |||||||| || || || || | || || ||||| |||||||| || Sbjct 124697 ATGCAGATCTTCGTAAAAACCCTTACGGGGAAAACCATCACCCTTGAGGTGGAACCCTCG 124638 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | |||||| ||||| ||||||||||| || || || || |||||| Sbjct 124637 GACACTATCGAAAATGTCAAAGCCAAAATCCAAGACAAAGAGGGAATCCCTCCGGATCAA 124578 Query 27108 CAG 27110 ||| Sbjct 124577 CAG 124575 >seq1686 Length=127819 Score = 91.5 bits (100), Expect = 1e-13 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 135649 AGGTTGTATGTGGTCTATTTGCGGTGTACACGATCAAGGATGGAAGGAGCGCAAAGTGTT 135708 ||||||||||||||| || ||||| | ||||| || || ||| ||||||| ||||| Sbjct 64936 AGGTTGTATGTGGTCAATCTGCGGAATTCACGACCAGGGCTGGGCGGAGCGCGCGGTGTT 64877 Query 135709 TGGCAAGATTCGCTATATGAACTATGACGGTTG 135741 |||||||||||||| |||||||| ||||| || Sbjct 64876 CGGCAAGATTCGCTACATGAACTACGACGGGTG 64844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434899459303680