Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoebis_20sennae_20[genbank_20GCA_5F001586405.1_202016-03-10] 3,484 sequences; 287,490,372 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq286 122 6e-23 seq2618 120 2e-22 seq3433 116 3e-21 seq1698 82.4 5e-11 >seq286 Length=933739 Score = 122 bits (134), Expect = 6e-23 Identities = 172/238 (72%), Gaps = 3/238 (1%) Strand=Plus/Minus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| ||| || |||||||| | | || | || || ||| ||||| || || || Sbjct 378320 TATTTGCATACCACCTCTCAGACGAAGGACTAAATGGAGAGTGGATTCCTTCTGAATATT 378261 Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220 ||| || | ||| ||| | || ||||| || || || || ||||||| ||||||||| Sbjct 378260 GTAGTCTGAGAGAGTGCGACCATCTTCCAGTTGTTTACCAGCGAAGATCAGACGCTGCTG 378201 Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGG 44279 ||||| ||| | |||||| || || ||||| ||| | |||| | || ||||| | Sbjct 378200 ATCTGGAGGAATACCTTCTTTGTCTTGAATCTTGGCCTTGAC-GTTCTCAATTGTGTCAG 378142 Query 44280 CGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || |||||||||| || || |||||||| || | |||||||| ||||||||||| Sbjct 378141 AGGGCTCCACCTCCAAAGTGATGGTCTTTCCTGTCAATGTCTTCACAAAGATTTGCAT 378084 Score = 104 bits (114), Expect = 2e-17 Identities = 168/238 (71%), Gaps = 3/238 (1%) Strand=Plus/Minus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| ||| || |||||||| | | || || || || || ||||| |||||||| Sbjct 378548 TATTTGCATACCACCTCTCAGACGAAGGACAAGATGGAGTGTAGATTCCTTCTGGATGTT 378489 Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220 ||| || | ||| ||| | || || |||||||| || |||||||||| | ||| || Sbjct 378488 GTAGTCCGAGAGGGTGCGACCATCTTCAAGCTGCTTTCCTGCAAAGATCAGTCTCTGTTG 378429 Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGG 44279 || | || | ||| || || ||| ||||| |||| | ||| | || ||||| | Sbjct 378428 GTCAGGGGGGATACCCTCTTTGTCCTGAATCTT-GGCTTTGACATTCTCAATTGTGTCCG 378370 Query 44280 CGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || |||||||||| || || ||||| || || | |||||||| || |||||||| Sbjct 378369 AGGGCTCCACCTCCAAAGTGATGGTCTTCCCTGTCAATGTCTTCACAAATATTTGCAT 378312 Score = 102 bits (112), Expect = 6e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| ||||||||||| || | || ||| | || || || || || || ||||| Sbjct 380099 CTCCTTCTGGATGTTGTAGTCTGAAAGAGTGCGACCATCTTCTAGTTGTTTACCAGCAAA 380040 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||||| ||||||||| |||| ||| | |||||| || ||| || || ||| | || Sbjct 380039 GATCAGACGCTGCTGGTCTGGAGGGATACCTTCTTTGTCCTGAATTTTAGCCTTGAC-GT 379981 Query 44266 TC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 || | || ||||| | | ||| || |||| || || ||||| || || | ||||||| Sbjct 379980 TCTCAATTGTGTCCGAAGGTTCGACTTCCAAAGTGATGGTCTTCCCTGTCAATGTCTTCA 379921 Query 44325 CGAAGATTTGCAT 44337 | ||||||||||| Sbjct 379920 CAAAGATTTGCAT 379908 Score = 98.7 bits (108), Expect = 7e-16 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || |||||||| | || || | || || || ||| || ||||| || || Sbjct 782001 TTGCATACCTCCTCTCAGACGTAATACTAAATGCAGTGTCGACTCTTTCTGGATATTATA 781942 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | ||| || | || |||| ||||| ||||| ||||| | |||||||||||| Sbjct 781941 ATCTGATAGTGTACGGCCATCCTCCAATTGCTTTCCGGCGAAGATAAGACGCTGCTGATC 781882 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 | ||| | ||||||||| || || || ||||| | | ||||| || | | Sbjct 781881 AGGAGGGATACCTTCCTTATCTTGGATTTTAGCCTTCACATTCTCAATGGTATCTGATGG 781822 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| || | ||||| ||||| || || | || || ||||| |||||||| Sbjct 781821 TTCCACTTCTAAAGTAATAGTCTTGCCAGTTAATGTTTTGACGAAAATTTGCAT 781768 Score = 96.9 bits (106), Expect = 2e-15 Identities = 164/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || |||||||| | | || || || || || ||||| ||||||||||| Sbjct 378089 TTGCATACCACCTCTCAGACGAAGGACAAGATGGAGAGTAGATTCCTTCTGGATGTTGTA 378030 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || | ||| ||| | || || |||||||| || |||||||||| | ||| || || Sbjct 378029 GTCCGAGAGGGTGCGACCATCTTCAAGCTGCTTTCCTGCAAAGATCAGTCTCTGTTGGTC 377970 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282 | || | ||||| || ||| | | || |||| | ||| | || ||||| | | Sbjct 377969 AGGGGGGATGCCTTCTTTGTCC-TGAATTTTAGCTTTGACATTCTCAATTGTGTCCGAAG 377911 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||||| || || |||||||| || | |||||||| || |||||||| Sbjct 377910 GCTCCACCTCCAGAGTGATGGTCTTTCCTGTCAATGTCTTCACAAATATTTGCAT 377856 Score = 96.9 bits (106), Expect = 2e-15 Identities = 164/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || |||||||| | | || || || || || ||||| ||||||||||| Sbjct 379913 TTGCATACCACCTCTCAGACGAAGGACAAGATGGAGAGTAGATTCCTTCTGGATGTTGTA 379854 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || | ||| ||| | || || |||||||| || |||||||||| | ||| || || Sbjct 379853 GTCCGAGAGGGTGCGACCATCTTCAAGCTGCTTTCCTGCAAAGATCAGTCTCTGTTGGTC 379794 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282 | || | ||||| || ||| | | || || | | |||| | || ||||| | || Sbjct 379793 AGGGGGGATGCCTTCTTTGTCC-TGAATTTTAGCCTTGACGTTCTCAATTGTGTCCGAGG 379735 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||||| || || ||||| || || | |||||||| || |||||||| Sbjct 379734 GCTCCACCTCCAAAGTGATGGTCTTCCCTGTCAATGTCTTCACAAATATTTGCAT 379680 Score = 95.1 bits (104), Expect = 9e-15 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 ||||||||||| |||||||| | |||| ||| | || |||| ||||| || |||||| Sbjct 781046 TCCTTTTGGATATTGTAATCAGAGAGTGTACGCCCATCTTCCAATTGCTTTCCAGCAAAG 780987 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 || | ||||| || || | ||| | ||||||||| || ||||| ||| | || Sbjct 780986 ATAAGTCGCTGTTGGTCAGGAGGGATACCTTCCTTATCTTGAATCTTAGCCTTTACATTT 780927 Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326 | ||||| || | | ||| || || | ||| || || || || || | || ||||| Sbjct 780926 TCAATGGTATCCGATGGTTCTACTTCTAGCGTTATTGTTTTGCCAGTCAATGTTTTCACA 780867 Query 44327 AAGATTTGCATGATG 44341 ||||| ||||| ||| Sbjct 780866 AAGATCTGCATTATG 780852 Score = 91.5 bits (100), Expect = 1e-13 Identities = 163/237 (69%), Gaps = 1/237 (0%) Strand=Plus/Minus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| ||| || |||||||| | | || || || || || ||||| |||||||| Sbjct 379004 TATTTGCATACCACCTCTCAGACGAAGGACTAGATGGAGGGTAGATTCCTTCTGGATGTT 378945 Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220 ||| || | ||| ||| | || || || ||||| || |||||||||| | ||| || Sbjct 378944 GTAGTCCGAGAGGGTGCGACCATCTTCAAGTTGCTTTCCTGCAAAGATCAGTCTCTGTTG 378885 Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGC 44280 || | || | ||||| || ||| ||||| ||| | | | || ||||| | Sbjct 378884 GTCAGGGGGGATGCCTTCTTTGTCCTGAATCTTGGCCTTGACATTCTCAATTGTGTCCGA 378825 Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || |||||||||| || || ||||| || || | |||||||| || || ||||| Sbjct 378824 GGGCTCCACCTCCAAAGTGATGGTCTTCCCTGTCAATGTCTTCACAAATATCTGCAT 378768 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || |||||||| | || || | || || || ||| || ||||| || || Sbjct 781773 TTGCATACCTCCTCTCAGACGTAATACTAAATGCAGTGTCGACTCTTTCTGGATATTATA 781714 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | || || | || |||| ||||| ||||| ||||| | |||||||||||| Sbjct 781713 ATCTGATAGAGTACGTCCATCCTCCAATTGCTTTCCGGCGAAGATAAGACGCTGCTGATC 781654 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 | ||| | ||||||||| || || || ||||| | | |||||||| | | Sbjct 781653 AGGAGGGATACCTTCCTTGTCTTGGATTTTAGCCTTCACATTCTCAATGGTGTCTGATGG 781594 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || || | || || ||||| || || | ||||| || || || ||||| Sbjct 781593 TTCAACTTCTAAAGTGATTGTCTTGCCAGTCAAAGTCTTGACAAAAATCTGCAT 781540 >seq2618 Length=201275 Score = 120 bits (132), Expect = 2e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 ||||||||||| ||| ||||| ||||||||||| |||| || || | || ||| Sbjct 161648 ACCAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGGCCATCCTCC 161707 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | || || || || |||||||||||||| || |||| ||| | |||||||| || Sbjct 161708 AATTGTTTACCAGCGAAGATCAAACGCTGTTGGTCTGGAGGAATTCCTTCCTTGTCTTGG 161767 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 || || ||||| || | || ||||||| | |||||||| | || || ||||| Sbjct 161768 ATTTTAGCCTTCACATTTTCGATAGTGTCGGAAGCCTCCACCTCAAGGGTGATGGTCTTA 161827 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| ||||| || |||||||| ||||| Sbjct 161828 CCCGTTAGGGTTTTTACGAAGATCTGCAT 161856 >seq3433 Length=253125 Score = 116 bits (128), Expect = 3e-21 Identities = 322/491 (66%), Gaps = 2/491 (0%) Strand=Plus/Minus Query 6427 TTGGCTCCCTTGCCTCCGGGAAATTCCCAATCTATGTCCACGCCGTCGAAGAACTTCCAA 6486 || ||||| ||||||||||| || ||||| || ||||| | ||||| || | ||||| Sbjct 146243 TTAGCTCCTTTGCCTCCGGGGAACTCCCAGTCGATGTCGAGACCGTCAAACATTTTCCAG 146184 Query 6487 GTTTCCA-GAAATTCTTCGACGCTCTCTACGAACACCTTTCTTTTAATCGTGTCGTTGAG 6545 ||| | ||| | ||||| | | ||||| | ||| |||| | ||| | || Sbjct 146183 GTTAGAAGGAACTCCTTCG-CTGAAGCGACGAAACGGTGTCTCTTAACTGGGTCATCGAA 146125 Query 6546 CTGGTAAAAGGGATCGCTCAGCGTCCACCCACCGATCGAGGGCAGGATGGTCAGATGCGG 6605 | | || ||||| || ||||| ||||| || || || || || ||| || || Sbjct 146124 GAAGAAGAAAGGATCTGCGAGGGTCCAGCCACCAATAGATGGGAGAATCTTCAAATCAGG 146065 Query 6606 ATTGTGTTTTCGTATGGCCATAAGCTGACCGAAATTACCCTTGTACATTTCCGAGTAGGC 6665 || || | | ||||| | || |||||||| || ||||| ||| ||| Sbjct 146064 CCTGGCTTGTTTCAACGCCATCAATTGGCCGAAATTGCCTTTGTAAGGTTCATTCCAGGA 146005 Query 6666 CTCGACGCCCTTCTGGGGTTTTTGTAGTGCGCCCCATATATCGTGTATGGACACCTTGAA 6725 || || ||||| || || || | ||| |||| ||| || || |||||| | || Sbjct 146004 AGAGAGTCCTTTCTGTGGCTTCTGCAAAGCGGCCCAGGGATCATGAATCGACACCGTAAA 145945 Query 6726 GTCGTCTCGTCCCTCGCACGATCGCTGCAGAGCTTCGAACGAGCCCGGCACCTGTTTCAG 6785 ||| || || || ||| || || |||| |||| ||| || | | |||| Sbjct 145944 GTCTTCGCGCCCAGAGCATGAGCGTTGCAACGCTTGGAAACTACCTTCGATTTCCTTCAA 145885 Query 6786 AGCGTCGTTGATACCATCCCCTCCGCACATGGGCACGAATCCGTACAGCAGATGTGTGAG 6845 | ||| ||||| ||||| || || || || || | ||| || || |||||||| || | Sbjct 145884 ACTGTCATTGATGCCATCACCACCACAGATCGGGATGAAGCCATATAGCAGATGAGTTAA 145825 Query 6846 ATTGGGAATGGGGATTCTGTCGGCGGGAAACTGTCTGTCGTAAACACCCCACTCCACGAA 6905 ||| |||||||||| | ||| | ||| ||| || ||| || ||||| || || || Sbjct 145824 ATTAGGAATGGGGACACGATCGACTGGATACTTTCGCGGGTACACGCCCCATTCGACAAA 145765 Query 6906 GTAAGCTCCGA 6916 ||| || |||| Sbjct 145764 GTACGCGCCGA 145754 >seq1698 Length=195807 Score = 82.4 bits (90), Expect = 5e-11 Identities = 81/103 (79%), Gaps = 4/103 (4%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | ||| |||||||||||||| || ||| |||||| ||||||||||| || | | Sbjct 124185 CCACCACGCAGCCTCAACACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGAG 124244 Query 44171 AGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAA 44211 || || || | || ||||||||||| ||||| |||||||| Sbjct 124245 AG--GGTTCTGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAA 124285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359975114357628