Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq191265 100 6e-16 seq1285 95.1 3e-14 seq191210 91.5 3e-13 seq190170 91.5 3e-13 seq188636 91.5 3e-13 seq176101 91.5 3e-13 seq173849 91.5 3e-13 seq173428 91.5 3e-13 seq48981 91.5 3e-13 seq16385 91.5 3e-13 seq31717 87.8 4e-12 >seq191265 Length=39239 Score = 100 bits (110), Expect = 6e-16 Identities = 167/238 (70%), Gaps = 4/238 (2%) Strand=Plus/Minus Query 61254 TTCAATCACGAGAGTCCCAATAGAGGTCATCAGTTTGTGACTCGTAAAATTACGAAGGCG 61313 ||||||||||| || | |||||| | | |||||||| ||||||||||| | Sbjct 18156 TTCAATCACGAATCACCTAGAAGAGGTGAAAATTTTGTGACACGTAAAATTACACGTTCC 18097 Query 61314 GTTGCAAATATTTTTAACGGTG--TCGAAAAATGCATGTATCTAGGAAACATAGACTCTA 61371 ||||| || |||| | | | | | || || || || | || || |||| || | Sbjct 18096 GTTGCCAAGATTTATCTCAATCAATTGGAATATTT-TGAAT-TGGGTAATTTAGATTCAA 18039 Query 61372 AAAGAGATTGGGGATATGCGGAAGATTATATCGAGGCTATGTGGTTGATGTTGCAACAAG 61431 || | |||||||| |||| |||||| | |||||||||||| |||||||||||| | Sbjct 18038 AACGTGATTGGGGCCATGCCATGGATTATGTAGAGGCTATGTGGATGATGTTGCAACGTG 17979 Query 61432 ATACTCCAGATGACTACGTTATTGCGACTGGACAGACGACGAGTGTCCGTGAATTCGT 61489 |||| || ||||| || ||||| |||||| |||| ||||| || ||||| || Sbjct 17978 ATACACCCTCGGACTATGTCATTGCCACTGGAGAGACTCATAGTGTACGAGAATTTGT 17921 >seq1285 Length=5054 Score = 95.1 bits (104), Expect = 3e-14 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 165705 CGCTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTT 165764 ||| |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||| Sbjct 1134 CGCATGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTT 1075 Query 165765 CGAGCCCCACGATGGGC 165781 ||||||||||| ||||| Sbjct 1074 CGAGCCCCACGTTGGGC 1058 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 80 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 21 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 20 CCCCACGTTGGGC 8 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 2706 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 2765 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 2766 CCCCACGTTGGGC 2778 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 4057 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 4116 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 4117 CCCCACGTTGGGC 4129 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 1947 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 2006 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 2007 CCCACGTTGGGC 2018 >seq191210 Length=12039 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 10594 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 10535 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 10534 CCCCACGTTGGGC 10522 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 11027 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 11086 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 11087 CCCCACGTTGGGC 11099 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 11515 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 11574 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 11575 CCCACGTTGGGC 11586 >seq190170 Length=4497 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 4035 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 4094 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 4095 CCCCACGTTGGGC 4107 >seq188636 Length=13954 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 5791 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 5850 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 5851 CCCCACGTTGGGC 5863 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 5871 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 5930 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 5931 CCCACGTTGGGC 5942 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 7824 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 7765 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 7764 CCCACGTTGGGC 7753 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 8357 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 8298 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 8297 CCCACGTTGGGC 8286 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 7311 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 7252 Query 165770 CCCACGATGGGC 165781 | |||| ||||| Sbjct 7251 CTCACGTTGGGC 7240 >seq176101 Length=21260 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 21108 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 21049 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 21048 CCCCACGTTGGGC 21036 >seq173849 Length=69344 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 64477 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 64536 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 64537 CCCCACGTTGGGC 64549 >seq173428 Length=32121 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 2672 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 2613 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 2612 CCCCACGTTGGGC 2600 >seq48981 Length=6382 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 1283 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1342 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 1343 CCCCACGTTGGGC 1355 >seq16385 Length=5643 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 152 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 211 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 212 CCCCACGTTGGGC 224 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 232 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 291 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 292 CCCACGTTGGGC 303 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 1277 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1336 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 1337 CCCACGTTGGGC 1348 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 3917 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 3858 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 3857 CCCACGTTGGGC 3846 >seq31717 Length=19532 Score = 87.8 bits (96), Expect = 4e-12 Identities = 299/459 (65%), Gaps = 14/459 (3%) Strand=Plus/Plus Query 281559 GGATTATAACTGGGAATGTTAGTAGACCAACCGGTTCCAATACCACTTGAACCATTTACC 281618 ||||| | | || ||| || ||||||||||| || ||||||||| | |||||||||| Sbjct 6748 GGATTGTGATTGTAAATCTTGGTAGACCAACCAGTACCAATACCATCGGCACCATTTACC 6807 Query 281619 AAAATACTCGGGATAATAGGTACATAACATTCTGGTTCAATTTTATCACCATCATCATAC 281678 || | | || ||||| |||| ||| || | |||||||| || | ||||||||| Sbjct 6808 AATACCATGGGTATAATGGGTATATACCACTGAGGTTCAATCTTTTGACCATCATCGACT 6867 Query 281679 AAATACTTCAG--AAGG-TTATCATCTGTATCGACGAAAACCTGTCGCGTCTTAGGGTTC 281735 |||| || |||| | ||||| | || ||| | | || | | || | Sbjct 6868 TCGTACTGGAGTAAAGGATCATCATGGGGAT---GGAATATCAAACGAGCCAAGGGAGAC 6924 Query 281736 AGTTTCGTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCCTGCAGCCTCGACCCA 281795 | | ||||| ||||| | || || ||| ||||| |||||| | | | || Sbjct 6925 ATAATGGTGAAAATATAACGAGCGCTAGCGCAATCTTTGCCACCCGTTAAACGAGTACCG 6984 Query 281796 AACTGACCCTCCGGCAACAACCAGTTAATGTTATTGCTCCCGACGTAATCCTGAGCCAGG 281855 || ||||| ||| | | | || |||||||| || || |||| ||||| | Sbjct 6985 AATTGACCTCTAGGCTCTAGCAAATTGATGTTATTAGAACCCACATAATTTTGAGCTAAA 7044 Query 281856 TTGACGATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGGCGCTGTGTTCGGCAACA 281915 || || || ||| || || || || ||||| || || ||||| ||| |||||| Sbjct 7045 TTAACAATAGTCATTTGTAGAGAGACTTCACCATGATGGTAGGCAGACATTTCAGCAACA 7104 Query 281916 TAACCACTGAACTGTGCTACCTTCACGT--CTGATGTCAAGTTGCGTTTGAA--AGCGCA 281971 |||| || || || ||||| || | | ||||| || |||||||| || | Sbjct 7105 GAACCGGACAATTGAGCAACCTTGACTTCACGTTTGTCA--TTACGTTTGAAACAGGTGA 7162 Query 281972 ATATAATACTTTTCGTTGAGAAGGCTTGAAACCATCAAC 282010 | ||| || || |||||| |||||| |||||||| || Sbjct 7163 ACATA--ACCTTACGTTGACCAGGCTTAAAACCATCCAC 7199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1055215518409800