Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq191290 136 3e-27 >seq191290 Length=35329 Score = 136 bits (150), Expect = 3e-27 Identities = 409/622 (66%), Gaps = 22/622 (4%) Strand=Plus/Plus Query 18601 ATTTGCGAAATGAATTTCCTCTTTTAACTACAAAGCGTGTTTTTTGGAGGGCCGTCGTGG 18660 || |||| ||| ||||||| | ||||| ||||| || || |||||| |||| || | | Sbjct 6676 ATATGCGTAATTCATTTCCTTTGTTAACCACAAAACGAGTATTTTGGCGGGCAGTAGCTG 6735 Query 18661 AAGAGTTGTTATGGTTTATCCGCGGGTCAACCGATTCCAAAGAACTCGCCGCTAAAGATA 18720 | ||| | || |||||| | | || | || ||| ||||| | | | ||| ||| Sbjct 6736 AGGAGCTTTTGTGGTTTGTACATGGTTGCACTGATGCCAAAATATTGCAAGAGAAAAATA 6795 Query 18721 TACACATATGGGATAT--ATACGGATCGAGCAAATTTCTAAATAGGAAT--GGCTTCCAT 18776 |||| || |||||| ||| ||||| |||||| | ||| ||| || ||| Sbjct 6796 TACATATTTGGGATGGTAATAGTGATCGT--AAATTTTTGGATA--AATTAGGTTTCACC 6851 Query 18777 AAAAGACACACGGGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCG 18836 || | | || || | || || | || || || || ||| | |||||||| || Sbjct 6852 GAACGTGAAGAAGGAGATTTGGGTCCGGTGTATGGTTTTCAATGGCGTCATTTTGGTGCC 6911 Query 18837 GAATATAAAGACTGTCAATCAAACTATTTACAGCAAGGAA----TCGATCAGCTGCAAAC 18892 ||||| ||| ||| | | |||| ||| ||| ||||||| || || Sbjct 6912 AAATATCGCACATGT-AATGA---TGACTACACCAATGAAGGTGTCGATCAATTGAAAGA 6967 Query 18893 TGTTATAGATACAATTAAAACAAA-CCCA--GAAAGCCGACGAATGATTATATCGTCTTG 18949 || || |||| || || || |||| || || ||| || ||||| || |||| Sbjct 6968 GGTCATTAATACCATACGCACTAATCCCAATGATAG---ACGCATAATTATGTCAGCTTG 7024 Query 18950 GAATCCAAAGGATATCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTA 19009 |||||| ||||| || ||||| | || || |||||| || || || || Sbjct 7025 GAATCCTGTTGATATACCACAAATGGCTTTGCCACCTTGTCACTGTTTGGCACAATTCTA 7084 Query 19010 CGTTGCAAACGGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGG 19069 ||||| || ||||||||||| || || |||| || | | |||||||| ||||| Sbjct 7085 TGTTGCTAATGGTGAATTATCTTGTCAGCTATATCAACGTAGTGCTGATATGGGTCTTGG 7144 Query 19070 GGTACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGG 19129 ||||| || || || ||| ||||| | || ||||| || | || ||| | || | Sbjct 7145 TGTACCATTTAATATAGCTTCTTATGCTTTACTAACCTATATGATTGCTCATATAACTGA 7204 Query 19130 ACTTAAAACCGGAGATTTAATTCATACAATGGGGGATGCACATATTTACTTGAATCATAT 19189 || | | | |||||||| |||||||| | || ||| ||||| |||| ||||||||| Sbjct 7205 CCTGAGACCAGGAGATTTTATTCATACCACTGGTGATACACATGTTTATAAGAATCATAT 7264 Query 19190 AGATGCTTTAAAAGTGCAGCTA 19211 || ||||||| | ||||||| Sbjct 7265 TGAACCTTTAAAGGAGCAGCTA 7286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398566920920700