Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq191290 149 5e-31 >seq191290 Length=35329 Score = 149 bits (164), Expect = 5e-31 Identities = 394/594 (66%), Gaps = 11/594 (2%) Strand=Plus/Minus Query 101677 TTTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTC 101736 ||||| || ||||| |||| ||| | || | ||| || | ||||| ||||| || Sbjct 7276 TTTAA-AGGTTCAATATGATTCTTATAAACATGTGTATCACCAGTGGTATGAATAAAATC 7218 Query 101737 TCCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAAT 101796 ||| || || | ||| | |||||||||||| | |||| | || ||| ||| || Sbjct 7217 TCCTGGTCTCAGGTCAGTTATATGAGCAATCATATAGGTTAGTAAAGCATAAGAAGCTAT 7158 Query 101797 GTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTT 101856 |||||||| || || | ||||||||||| | |||||| || ||||| || | | Sbjct 7157 ATTAAATGGTACACCAAGACCCATATCAGCACTACGTTGATATAGCTGACAAGATAATTC 7098 Query 101857 TCCATCACAGACATAAAATTGACTTAATACA-TGACAAGGCGGCAACACCATTTTAGGAA 101915 |||| | ||||| ||||| || ||| |||||||| ||||| |||||| || | Sbjct 7097 ACCATTAGCAACATAGAATTGTGCCAA-ACAGTGACAAGGTGGCAAAGCCATTTGTGGTA 7039 Query 101916 TGTCTGAAACATTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAG 101975 | || | ||||||||| |||| | || | |||||| | || || || ||| | Sbjct 7038 TATCAACAGGATTCCAAGCTGACATAATTATGCGTCTATCATTGGGATTAGTGCGTATGG 6979 Query 101976 TATCAATCAACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTT 102035 ||| ||| | || ||| ||||| || || ||||| | || || || || | Sbjct 6978 TATTAATGACCTCTTTCAATTGATCGACACCTTCATTGGTGTAGTC---ATCATTACATG 6922 Query 102036 T---ATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092 | ||||| || || ||||| | ||| ||||| |||||||| || || | |||||||| Sbjct 6921 TGCGATATTTGGCACCAAAATGACGCCATTGAAAACCATACACCGGACCCAAATCTCCTT 6862 Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152 | || | || ||||| | |||||| |||||| | | | ||| ||||||||| Sbjct 6861 CTTCACGTTCGGTGAAACCTAATTTATCCAAAAATTTACGATCACTATTACCATCCCAAA 6802 Query 102153 TGTGCA-CGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAAC 102211 | || | || || | | |||| ||||| | || | ||||||||| Sbjct 6801 TATGTATATTTTTCTCTTGCAATAT-TTTGGCATCAGTGCAACCATGTACAAACCACAAA 6743 Query 102212 AGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAAT 102265 || || ||| | || | | ||||||||||| || || ||||| | |||||| Sbjct 6742 AGCTCCTCAGCTACTGCCCGCCAAAATACTCGTTTTGTGGTTAACAAAGGAAAT 6689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 360403846927460